Cow genome map
| Conread name: | rpliv0130_k3.y1 |
| Conread position: | 185-558 |
| Cow position: | chr16:229016-228628 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 271 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 186-490 |
| Cow position: | chr16:23846397-23846700 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 249-542 |
| Cow position: | chr16:2250106-2249792 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 255-508 |
| Cow position: | chr16:29661578-29661319 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 260-473 |
| Cow position: | chr16:21558313-21558081 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 260-508 |
| Cow position: | chr16:52775378-52775627 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 182, 60 |
| Conread position: | 260-527 |
| Cow position: | chr16:18054701-18054414 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 260-551 |
| Cow position: | chr16:27274887-27275198 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 260-553 |
| Cow position: | chr16:54014936-54014623 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 260-554 |
| Cow position: | chr16:40516385-40516694 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 261-554 |
| Cow position: | chr16:29626142-29626457 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 25, 157 |
| Conread position: | 262-507 |
| Cow position: | chr16:15668945-15669206 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 262-542 |
| Cow position: | chr16:15434032-15433731 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 264-489 |
| Cow position: | chr16:24173528-24173774 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 204 |
| Conread position: | 269-509 |
| Cow position: | chr16:56078959-56078704 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 20, 179 |
| Conread position: | 287-553 |
| Cow position: | chr16:17749328-17749610 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 128 |
| Conread position: | 337-460 |
| Cow position: | chr16:21979853-21979980 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 337-490 |
| Cow position: | chr16:39021245-39021088 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 337-534 |
| Cow position: | chr16:53617422-53617626 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 8, 131 |
| Conread position: | 344-490 |
| Cow position: | chr16:45132891-45133046 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 344-521 |
| Cow position: | chr16:35280817-35280637 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 344-545 |
| Cow position: | chr16:4614590-4614382 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 344-553 |
| Cow position: | chr16:31133364-31133147 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 347-507 |
| Cow position: | chr16:11166779-11166613 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 347-553 |
| Cow position: | chr16:56202744-56202536 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 133 |
| Conread position: | 398-547 |
| Cow position: | chr16:12274844-12274689 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.