Cow genome map
| Conread name: | rpliv0130_k3.y1 |
| Conread position: | 143-470 |
| Cow position: | chr17:24005031-24004678 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 180-489 |
| Cow position: | chr17:22808440-22808775 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 255-472 |
| Cow position: | chr17:5183-5415 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 159 |
| Conread position: | 260-455 |
| Cow position: | chr17:3829997-3829786 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 260-484 |
| Cow position: | chr17:22463686-22463924 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 260-525 |
| Cow position: | chr17:22470077-22470363 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 50, 117 |
| Conread position: | 260-527 |
| Cow position: | chr17:23783644-23783926 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 263-501 |
| Cow position: | chr17:27865513-27865259 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 283-527 |
| Cow position: | chr17:3435335-3435075 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 319-497 |
| Cow position: | chr17:21840256-21840074 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 337-527 |
| Cow position: | chr17:21851163-21851359 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 342-545 |
| Cow position: | chr17:9086444-9086236 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 110 |
| Conread position: | 344-472 |
| Cow position: | chr17:24995313-24995444 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 108 |
| Conread position: | 344-508 |
| Cow position: | chr17:3836614-3836442 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 344-509 |
| Cow position: | chr17:21898490-21898321 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 41, 109 |
| Conread position: | 344-521 |
| Cow position: | chr17:35251449-35251627 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 156 |
| Conread position: | 347-558 |
| Cow position: | chr17:25504068-25503851 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 215 |
| Conread position: | 352-521 |
| Cow position: | chr17:26656130-26656305 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 360-489 |
| Cow position: | chr17:8639756-8639624 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 91 |
Show alignments to all cow chromosomes.