Cow genome map
| Conread name: | rpliv0130_k3.y1 |
| Conread position: | 183-490 |
| Cow position: | chr18:14140226-14139893 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 121 |
| Conread position: | 183-494 |
| Cow position: | chr18:51389068-51389404 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 192-556 |
| Cow position: | chr18:42735367-42734992 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 251-507 |
| Cow position: | chr18:8340726-8340998 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 260-483 |
| Cow position: | chr18:25089019-25088798 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 260-545 |
| Cow position: | chr18:32401558-32401245 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 261-473 |
| Cow position: | chr18:43243780-43243549 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 266-463 |
| Cow position: | chr18:880600-880385 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 170 |
| Conread position: | 268-462 |
| Cow position: | chr18:25086601-25086390 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 6 |
| Conread position: | 318-521 |
| Cow position: | chr18:17234264-17234055 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 39, 204 |
| Conread position: | 335-490 |
| Cow position: | chr18:16028719-16028565 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 29 |
| Conread position: | 336-478 |
| Cow position: | chr18:48004618-48004478 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 118 |
| Conread position: | 337-505 |
| Cow position: | chr18:1707784-1707957 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 344-489 |
| Cow position: | chr18:31954898-31955043 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 344-524 |
| Cow position: | chr18:52393197-52393383 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 344-543 |
| Cow position: | chr18:44215225-44215017 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 344-545 |
| Cow position: | chr18:49646693-49646900 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 41, 128 |
| Conread position: | 347-505 |
| Cow position: | chr18:2116997-2117161 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 110 |
| Conread position: | 389-553 |
| Cow position: | chr18:39097402-39097233 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 156 |
Show alignments to all cow chromosomes.