Cow genome map


           Conread name:
           rpliv0130_k3.y1
        

               Conread position:
               260-490
               

               Cow position:
               chr19:15971956-15972206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               260-534
               

               Cow position:
               chr19:11784174-11784479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               261-490
               

               Cow position:
               chr19:47325597-47325824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               123, 34
               

               Conread position:
               327-545
               

               Cow position:
               chr19:44339105-44338878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               340-545
               

               Cow position:
               chr19:26393198-26393402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               342-490
               

               Cow position:
               chr19:11076466-11076617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               41, 86
               

               Conread position:
               344-516
               

               Cow position:
               chr19:28339905-28339727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               344-527
               

               Cow position:
               chr19:53629831-53630018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               352-558
               

               Cow position:
               chr19:2156329-2156118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               354-545
               

               Cow position:
               chr19:44158548-44158755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 92
               

               Conread position:
               377-554
               

               Cow position:
               chr19:28447672-28447853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 72
               
Show alignments to all cow chromosomes.