Cow genome map
| Conread name: | rpliv0130_k3.y1 |
| Conread position: | 157-490 |
| Cow position: | chr2:64174843-64175207 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 160-448 |
| Cow position: | chr2:45690022-45690344 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 171-555 |
| Cow position: | chr2:74307927-74308335 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 187-504 |
| Cow position: | chr2:70178061-70177726 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 253-483 |
| Cow position: | chr2:69924336-69924088 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 260-490 |
| Cow position: | chr2:15339440-15339687 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 260-545 |
| Cow position: | chr2:73750846-73751160 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 195 |
| Conread position: | 260-547 |
| Cow position: | chr2:19150370-19150062 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 260-549 |
| Cow position: | chr2:55407152-55407451 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 260-553 |
| Cow position: | chr2:45113627-45113940 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 260-554 |
| Cow position: | chr2:19063690-19063378 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 261-490 |
| Cow position: | chr2:42190987-42190740 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 261-508 |
| Cow position: | chr2:856541-856802 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 263-477 |
| Cow position: | chr2:39548928-39548701 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 192 |
| Conread position: | 263-478 |
| Cow position: | chr2:36951135-36950910 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 161 |
| Conread position: | 264-488 |
| Cow position: | chr2:3713848-3713606 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 274-490 |
| Cow position: | chr2:69641040-69640812 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 274-490 |
| Cow position: | chr2:81129921-81130157 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 283-507 |
| Cow position: | chr2:74694645-74694890 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 316-520 |
| Cow position: | chr2:42264867-42265078 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 323-490 |
| Cow position: | chr2:71461804-71461634 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 47 |
| Conread position: | 336-461 |
| Cow position: | chr2:46277411-46277537 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 336-488 |
| Cow position: | chr2:57995916-57995764 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 114, 23 |
| Conread position: | 342-490 |
| Cow position: | chr2:46448241-46448085 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 344-463 |
| Cow position: | chr2:18088873-18088994 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 344-473 |
| Cow position: | chr2:33512385-33512254 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 344-483 |
| Cow position: | chr2:48071058-48070915 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 98 |
| Conread position: | 344-530 |
| Cow position: | chr2:46258386-46258195 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 41, 181 |
| Conread position: | 344-534 |
| Cow position: | chr2:18448700-18448897 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 119 |
| Conread position: | 344-548 |
| Cow position: | chr2:376845-376636 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 41, 189 |
| Conread position: | 344-553 |
| Cow position: | chr2:74811263-74811041 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 347-545 |
| Cow position: | chr2:2400540-2400739 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 138 |
| Conread position: | 347-559 |
| Cow position: | chr2:70279243-70279458 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 348-553 |
| Cow position: | chr2:77715324-77715117 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 350-503 |
| Cow position: | chr2:23648219-23648376 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 353-553 |
| Cow position: | chr2:67381706-67381924 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 354-507 |
| Cow position: | chr2:46307664-46307820 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 354-545 |
| Cow position: | chr2:12854857-12855054 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 31, 114 |
| Conread position: | 359-503 |
| Cow position: | chr2:73168530-73168383 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 362-554 |
| Cow position: | chr2:19575609-19575406 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 371-554 |
| Cow position: | chr2:64783705-64783514 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.