Cow genome map
| Conread name: | rpliv0130_k3.y1 |
| Conread position: | 162-468 |
| Cow position: | chr21:14682127-14681799 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 186-507 |
| Cow position: | chr21:958641-958283 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 299 |
| Conread position: | 256-510 |
| Cow position: | chr21:8515855-8515582 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 260-489 |
| Cow position: | chr21:19572964-19572720 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 260-527 |
| Cow position: | chr21:32040259-32040538 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 193 |
| Conread position: | 260-527 |
| Cow position: | chr21:32920083-32919786 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 261-490 |
| Cow position: | chr21:48538240-48537991 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 262-468 |
| Cow position: | chr21:10275866-10275642 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 262-497 |
| Cow position: | chr21:35555758-35555510 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 263-490 |
| Cow position: | chr21:12410397-12410150 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 264-490 |
| Cow position: | chr21:9015835-9015590 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 264-507 |
| Cow position: | chr21:41139977-41140233 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 178 |
| Conread position: | 274-473 |
| Cow position: | chr21:7075395-7075179 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 283-527 |
| Cow position: | chr21:41535850-41536107 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 181 |
| Conread position: | 300-472 |
| Cow position: | chr21:372629-372812 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 319-546 |
| Cow position: | chr21:19671565-19671336 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 342-490 |
| Cow position: | chr21:13361107-13360955 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 344-494 |
| Cow position: | chr21:44558721-44558874 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 344-553 |
| Cow position: | chr21:37260449-37260655 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 344-564 |
| Cow position: | chr21:35744060-35744280 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 150 |
| Conread position: | 354-514 |
| Cow position: | chr21:8941326-8941487 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 356-470 |
| Cow position: | chr21:32401735-32401619 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 361-502 |
| Cow position: | chr21:19934305-19934159 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 362-553 |
| Cow position: | chr21:19511019-19511210 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 15 |
Show alignments to all cow chromosomes.