Cow genome map


           Conread name:
           rpliv0130_k3.y1
        

               Conread position:
               133-470
               

               Cow position:
               chr28:6951657-6952025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               145-557
               

               Cow position:
               chr28:5703058-5703498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               307
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               180-553
               

               Cow position:
               chr28:7340334-7340740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               63, 130
               

               Conread position:
               258-492
               

               Cow position:
               chr28:2052222-2051971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 180
               

               Conread position:
               260-471
               

               Cow position:
               chr28:19220005-19219776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               262-490
               

               Cow position:
               chr28:34846902-34847148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               263-490
               

               Cow position:
               chr28:26920427-26920661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 32
               

               Conread position:
               277-554
               

               Cow position:
               chr28:5933309-5933021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               318-528
               

               Cow position:
               chr28:33201048-33201268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               344-490
               

               Cow position:
               chr28:30126752-30126602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               354-478
               

               Cow position:
               chr28:33064518-33064392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               358-496
               

               Cow position:
               chr28:4134365-4134219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 0
               
Show alignments to all cow chromosomes.