Cow genome map
| Conread name: | rpliv0130_k3.y1 |
| Conread position: | 150-527 |
| Cow position: | chr29:18445155-18444750 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 38, 33 |
| Conread position: | 185-551 |
| Cow position: | chr29:39419376-39419756 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 266 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 190-545 |
| Cow position: | chr29:1761648-1762035 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 53, 279 |
| Conread position: | 254-508 |
| Cow position: | chr29:10625830-10626104 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 258-444 |
| Cow position: | chr29:32203874-32204080 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 6, 38 |
| Conread position: | 260-472 |
| Cow position: | chr29:13500771-13500551 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 260-480 |
| Cow position: | chr29:38262903-38263138 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 260-554 |
| Cow position: | chr29:43153026-43153343 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 263-429 |
| Cow position: | chr29:40442920-40442747 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 263-486 |
| Cow position: | chr29:23133845-23134084 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 265-482 |
| Cow position: | chr29:313222-312989 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 23, 192 |
| Conread position: | 323-490 |
| Cow position: | chr29:24801813-24801641 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 162 |
| Conread position: | 327-524 |
| Cow position: | chr29:42905005-42904809 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 126 |
| Conread position: | 336-553 |
| Cow position: | chr29:39532389-39532604 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 344-490 |
| Cow position: | chr29:24506781-24506930 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 344-527 |
| Cow position: | chr29:26524496-26524316 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 344-551 |
| Cow position: | chr29:40874524-40874738 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 344-553 |
| Cow position: | chr29:40567072-40566853 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 205 |
| Conread position: | 348-490 |
| Cow position: | chr29:29128700-29128846 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 355-545 |
| Cow position: | chr29:39420113-39420312 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 85 |
| Conread position: | 386-551 |
| Cow position: | chr29:27058346-27058508 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 132, 82 |
Show alignments to all cow chromosomes.