Cow genome map
| Conread name: | rpliv0130_k3.y1 |
| Conread position: | 154-486 |
| Cow position: | chr3:3812122-3811754 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 171-490 |
| Cow position: | chr3:45936835-45937167 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 137, 12 |
| Conread position: | 260-488 |
| Cow position: | chr3:14038941-14038696 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 35 |
| Conread position: | 260-490 |
| Cow position: | chr3:78096095-78096334 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 260-503 |
| Cow position: | chr3:8146976-8146713 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 260-503 |
| Cow position: | chr3:28595730-28595493 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 260-506 |
| Cow position: | chr3:32578948-32578686 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 260-507 |
| Cow position: | chr3:16574518-16574787 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 260-568 |
| Cow position: | chr3:17615664-17615976 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 157 |
| Conread position: | 261-491 |
| Cow position: | chr3:81222243-81222488 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 207 |
| Conread position: | 262-468 |
| Cow position: | chr3:32246535-32246312 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 262-544 |
| Cow position: | chr3:63998130-63998432 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 263-470 |
| Cow position: | chr3:75055873-75055653 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 37 |
| Conread position: | 263-491 |
| Cow position: | chr3:31110265-31110513 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 263-507 |
| Cow position: | chr3:25695479-25695742 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 263-520 |
| Cow position: | chr3:23178493-23178774 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 263-527 |
| Cow position: | chr3:8435599-8435309 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 174 |
| Conread position: | 264-489 |
| Cow position: | chr3:72884762-72885010 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 264-508 |
| Cow position: | chr3:11952237-11951975 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 265-473 |
| Cow position: | chr3:9770330-9770550 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 109 |
| Conread position: | 313-506 |
| Cow position: | chr3:69279933-69279737 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 324-527 |
| Cow position: | chr3:53910879-53911082 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 61, 103 |
| Conread position: | 337-490 |
| Cow position: | chr3:14184387-14184230 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 126 |
| Conread position: | 344-489 |
| Cow position: | chr3:6769895-6769748 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 40, 109 |
| Conread position: | 344-490 |
| Cow position: | chr3:52608760-52608607 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 344-499 |
| Cow position: | chr3:44095364-44095517 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 344-527 |
| Cow position: | chr3:83458995-83459177 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 344-541 |
| Cow position: | chr3:63151760-63151555 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 347-489 |
| Cow position: | chr3:6559180-6559037 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 347-508 |
| Cow position: | chr3:83980685-83980525 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 352-516 |
| Cow position: | chr3:67828674-67828505 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 382-553 |
| Cow position: | chr3:6736312-6736487 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
Show alignments to all cow chromosomes.