Cow genome map
| Conread name: | rpliv0130_k3.y1 |
| Conread position: | 144-473 |
| Cow position: | chr4:55647830-55648180 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 171-489 |
| Cow position: | chr4:54355568-54355902 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 180-507 |
| Cow position: | chr4:59265409-59265761 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 67, 129 |
| Conread position: | 195-527 |
| Cow position: | chr4:64963209-64963562 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 260-476 |
| Cow position: | chr4:54377472-54377704 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 260-486 |
| Cow position: | chr4:52336952-52336719 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 260-488 |
| Cow position: | chr4:25189018-25188773 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 260-488 |
| Cow position: | chr4:35070502-35070252 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 260-490 |
| Cow position: | chr4:18283534-18283783 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 260-508 |
| Cow position: | chr4:45383188-45382921 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 28, 200 |
| Conread position: | 261-490 |
| Cow position: | chr4:29119585-29119340 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 261-524 |
| Cow position: | chr4:63548829-63549118 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 211 |
| Conread position: | 263-483 |
| Cow position: | chr4:43283945-43283705 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 263-545 |
| Cow position: | chr4:3901900-3901590 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 263-545 |
| Cow position: | chr4:59857969-59858271 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 265-476 |
| Cow position: | chr4:54379258-54379027 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 268-489 |
| Cow position: | chr4:57644105-57643869 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 271-491 |
| Cow position: | chr4:37548517-37548752 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 188 |
| Conread position: | 276-503 |
| Cow position: | chr4:23681094-23681335 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 321-553 |
| Cow position: | chr4:36505797-36506028 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 337-473 |
| Cow position: | chr4:565128-565268 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 344-473 |
| Cow position: | chr4:37857352-37857485 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 344-507 |
| Cow position: | chr4:16942225-16942387 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 344-532 |
| Cow position: | chr4:38951665-38951856 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 189 |
| Conread position: | 344-545 |
| Cow position: | chr4:32843942-32844153 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 344-547 |
| Cow position: | chr4:4020767-4020973 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 134, 151 |
| Conread position: | 344-550 |
| Cow position: | chr4:4125890-4126099 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 348-545 |
| Cow position: | chr4:181692-181487 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.