Cow genome map
| Conread name: | rpliv0130_k3.y1 |
| Conread position: | 161-510 |
| Cow position: | chr9:49582554-49582919 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 75, 22 |
| Conread position: | 171-501 |
| Cow position: | chr9:25032413-25032777 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 260-491 |
| Cow position: | chr9:6163955-6163703 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 260-522 |
| Cow position: | chr9:7094079-7093804 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 260-527 |
| Cow position: | chr9:62925540-62925254 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 261-478 |
| Cow position: | chr9:6317037-6317272 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 261-490 |
| Cow position: | chr9:10571400-10571639 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 261-490 |
| Cow position: | chr9:55033248-55033001 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 157 |
| Conread position: | 264-553 |
| Cow position: | chr9:13453485-13453795 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 342-557 |
| Cow position: | chr9:6721624-6721839 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 43, 174 |
| Conread position: | 344-489 |
| Cow position: | chr9:6656073-6656220 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 108 |
| Conread position: | 344-503 |
| Cow position: | chr9:20984060-20983897 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 344-516 |
| Cow position: | chr9:28599223-28599399 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 344-527 |
| Cow position: | chr9:31644110-31644288 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 344-544 |
| Cow position: | chr9:28281747-28281541 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 110 |
| Conread position: | 347-473 |
| Cow position: | chr9:47520166-47520290 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 347-545 |
| Cow position: | chr9:10896716-10896922 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 163 |
Show alignments to all cow chromosomes.