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Cow genome map

           
Conread name:
           
rpliv0131_d19.y1
        

               
Conread position:
               
1-138
               

               
Cow position:
               
chr14:12137875-12138014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr14:41756014-41756151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr14:37236228-37236373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr14:12071669-12071519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr14:47893971-47894121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr14:10940006-10939854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr14:22231050-22230901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr14:11981322-11981477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 106
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr14:40806740-40806601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr14:19772416-19772264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr14:20010650-20010493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr14:19774359-19774207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr14:32784260-32784102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr14:20513085-20513244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr14:26800154-26800313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr14:8949509-8949665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 69
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr14:20035576-20035737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr14:29282610-29282770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr14:15392065-15392234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr14:16770010-16769844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr14:39097362-39097529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr14:10920710-10920540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr14:41267865-41267709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr14:4481532-4481695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr14:5668263-5668093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr14:34697333-34697497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 130
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr14:7582063-7581891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr14:20483847-20483672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr14:11079313-11079480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr14:37152077-37151912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr14:7108360-7108535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr14:41623184-41623347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr14:41289394-41289219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr14:37935052-37934876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr14:44153130-44152941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr14:19832535-19832354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr14:30023342-30023160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr14:8027709-8027521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr14:27653019-27653201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 178
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr14:7316651-7316833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr14:18412736-18412551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr14:37436864-37436670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr14:8083054-8083240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr14:11472373-11472189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
88, 173
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr14:6409463-6409281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr14:18270218-18270403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr14:20915123-20914932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr14:16287342-16287529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr14:7127718-7127908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr14:28401665-28401857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 166
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr14:41871731-41871543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 121
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr14:46946275-46946068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr14:20245310-20245118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr14:40347784-40347594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr14:27364435-27364631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
89, 147
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr14:18351009-18350798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr14:35421229-35421027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr14:11576927-11577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:5959135-5958921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr14:20234334-20234126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr14:22997738-22997508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr14:27330590-27330812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 115
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr14:45955145-45955350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 144
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr14:6637371-6637155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 110
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr14:18559199-18558991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr14:23441013-23440806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:7872670-7872891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:10706736-10706945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:11729249-11729039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:36425546-36425340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:1814803-1814585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:13731239-13731026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
117, 89
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:20481994-20481771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 147
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:21535445-21535234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:20466794-20467003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:23419651-23419871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr14:23078934-23078716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:10937528-10937756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:12884122-12884340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
85, 172
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:15428336-15428557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:38286127-38285890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 212
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:49940871-49941086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr14:28694861-28694634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr14:28924023-28924248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 210
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr14:27733466-27733696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
204, 64
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:21224501-21224733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr14:6360251-6360498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 226
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr14:25381298-25381517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr14:28465360-28465122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 180
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:21371926-21371684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
75, 111
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr14:4469726-4469472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
86, 139
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr14:13928440-13928671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
171, 61
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr14:29723718-29723491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr14:44713274-44713518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
91, 199
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr14:11643388-11643153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr14:27394606-27394360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
60, 131
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr14:23104138-23103892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 67
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr14:48744373-48744617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr14:8923729-8923476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr14:27999181-27998930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
70, 178
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr14:12142058-12141779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr14:1777989-1777730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
84, 134
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr14:48900028-48900288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr14:1796055-1796309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr14:15944809-15944548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 120
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr14:36443159-36442897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr14:6655731-6655460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 115
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr14:12127539-12127284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr14:19193320-19193601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
51, 227
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr14:16352216-16352475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr14:22866014-22865731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr14:1708801-1708521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 224
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr14:16524327-16524608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr14:12635019-12634748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr14:45312654-45312932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr14:11470292-11469998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 166
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr14:37422915-37422637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr14:42419421-42419124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr14:7036502-7036203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr14:11056876-11056588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr14:12954517-12954231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr14:1868930-1868637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr14:35503221-35503523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr14:15504299-15504000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr14:16344288-16344009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr14:23424123-23424417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr14:23442884-23443178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr14:40754386-40754085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr14:27823290-27823593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr14:41302985-41302668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 230
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr14:3949246-3948936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 224
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr14:33457187-33456870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr14:49817828-49817529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
91, 51
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr14:22941882-22941548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr14:46997910-46998219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 51
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr14:46685156-46685472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr14:44084618-44084298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
207, 50
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr14:23080896-23080578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr14:21933487-21933153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr14:15492449-15492790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr14:19321652-19321312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
86, 193
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr14:41966083-41966438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 235
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr14:16256632-16256965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr14:5235021-5234678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr14:15997893-15997563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
217, 51
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr14:2975228-2974882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr14:25001890-25002246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 223
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr14:27338196-27338557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 174
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr14:28803861-28803531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
279, 77
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr14:26796942-26796559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
63, 345
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr14:7479864-7480232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
86, 201
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr14:29592858-29592506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 89
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr14:20826349-20826696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 107
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr14:14182209-14182568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr14:24387309-24387709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr14:40165287-40165679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr14:38529837-38530244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:12961456-12961849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:36289933-36289535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:42246862-42247250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr14:35498636-35498215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 30
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr14:47673020-47672597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr14:4227365-4226904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr14:10858298-10858726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr14:14466602-14466185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 155
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr14:26941363-26940928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 209
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr14:8541349-8540915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr14:5630026-5630465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 69
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr14:17554634-17554182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
162, 67
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr14:33774166-33773750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 30
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr14:12036971-12036537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 144
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr14:43031673-43032110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
219, 49
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr14:15518545-15518072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 250
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr14:19594277-19593833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr14:33714816-33714381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr14:45052296-45052745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 194
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr14:45677089-45677530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr14:1715586-1716044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 187
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr14:33791051-33791499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr14:23712553-23712997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 64
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:5222427-5221975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 109
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:10078112-10078569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 240
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr14:8848136-8848570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
343, 68
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr14:24236680-24237142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 253
               

               
Conread position:
               
1-469
               

               
Cow position:
               
chr14:5835788-5836234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 19
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr14:18345866-18345393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 44
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr14:39770363-39769860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr14:48426930-48427440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr14:18309442-18308935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 84
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr14:33247562-33247043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 82
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr14:42330204-42330740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 215
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr14:42155109-42154564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr14:38168562-38169090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 53
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr14:6736010-6735447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
1-572
               

               
Cow position:
               
chr14:27355252-27355819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 226
               

               
Conread position:
               
1-583
               

               
Cow position:
               
chr14:28304929-28304339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 226
               

               
Conread position:
               
1-601
               

               
Cow position:
               
chr14:50362650-50363258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
1-606
               

               
Cow position:
               
chr14:21357415-21358029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
1-607
               

               
Cow position:
               
chr14:50589532-50588933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 17
               

               
Conread position:
               
1-611
               

               
Cow position:
               
chr14:16237652-16237035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr14:13006382-13006977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 94
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr14:27848037-27848672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr14:18941430-18940837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 128
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr14:23090523-23089887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr14:48496289-48495675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 127
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:1803261-1802649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:6600094-6599477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:7959656-7960241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 51
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:12244524-12243913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:12520446-12519857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 63
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:13385224-13385848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 227
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:13809812-13810438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 56
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:14622310-14621705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 51
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:17899337-17899947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:20640771-20640146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 71
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:20667147-20666546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:21201962-21201353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 110
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:26115917-26116537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 154
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:28378215-28378836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:28987547-28988165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 165
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:30760074-30760683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 120
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:35381447-35382059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 109
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:35420904-35420285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:36166798-36167410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 116
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:40230777-40230163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:41472118-41471493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 223
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:43046034-43046622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
2-143
               

               
Cow position:
               
chr14:19988203-19988056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
2-143
               

               
Cow position:
               
chr14:37504371-37504517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
2-148
               

               
Cow position:
               
chr14:8590986-8590841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
2-148
               

               
Cow position:
               
chr14:23926362-23926208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
2-148
               

               
Cow position:
               
chr14:29011187-29011036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
2-157
               

               
Cow position:
               
chr14:37966800-37966959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 117
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr14:28097503-28097676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr14:24785518-24785694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr14:47200275-47200090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 167
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr14:50519318-50519142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr14:39423036-39422843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr14:23005535-23005714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr14:9403320-9403510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr14:15211793-15211973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr14:26918852-26919065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
74, 160
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr14:22916436-22916222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr14:24712773-24712555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr14:20047850-20047634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr14:42440062-42439838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
52, 185
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr14:25903391-25903610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr14:20577087-20576859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr14:34775890-34775654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 219
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr14:37901859-37902103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
219, 50
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr14:23962713-23962957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 103
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr14:39095323-39095077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr14:10693398-10693139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 147
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr14:12073097-12072825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
78, 204
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr14:33229541-33229261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
77, 127
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr14:41253120-41252837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
211, 68
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr14:26655278-26654971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 220
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr14:48772776-48773070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
277, 15
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr14:38747538-38747874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr14:26628667-26628307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr14:13042618-13042988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr14:20110862-20110479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 214
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr14:16032869-16033257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr14:28115332-28114924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr14:8786678-8786280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 73
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr14:10609538-10609968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr14:48447306-48446878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 217
               

               
Conread position:
               
2-423
               

               
Cow position:
               
chr14:6541868-6541438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
2-446
               

               
Cow position:
               
chr14:19852077-19851613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 146
               

               
Conread position:
               
2-446
               

               
Cow position:
               
chr14:23682126-23682570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 77
               

               
Conread position:
               
2-448
               

               
Cow position:
               
chr14:38144251-38143805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 209
               

               
Conread position:
               
2-541
               

               
Cow position:
               
chr14:20016851-20016306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 233
               

               
Conread position:
               
2-580
               

               
Cow position:
               
chr14:31130518-31129947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr14:14327266-14326632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr14:39434395-39433806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 66
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr14:41749897-41749298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 88
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr14:43562236-43561609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 203
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr14:50027089-50027685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr14:31342069-31342214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr14:36151184-36151331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr14:21593142-21592984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr14:27847216-27847369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr14:26886885-26886716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr14:33688730-33688571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr14:30450491-30450664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 128
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr14:12496343-12496520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr14:6234363-6234184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr14:35651920-35651748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr14:8707416-8707590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr14:13516132-13515947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 137
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr14:28957747-28957937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr14:3871872-3871680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr14:6965619-6965817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr14:14224425-14224626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr14:36559366-36559165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr14:46431927-46432131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 165
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr14:10799026-10799234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr14:28245008-28244795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
82, 147
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr14:13822586-13822805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr14:10387518-10387733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 159
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr14:20984196-20984412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 107
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr14:28131435-28131215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr14:24744794-24745020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
82, 204
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr14:2173421-2173649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr14:7198355-7198601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr14:17475707-17475452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr14:24527303-24527058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr14:49713840-49714098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
192, 199
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr14:4282650-4282383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr14:21305633-21305903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
82, 252
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr14:12081266-12081010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr14:40474422-40474697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
82, 144
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr14:7621272-7620994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
83, 124
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr14:24748362-24748069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr14:40329301-40329631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr14:8867701-8867362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
74, 106
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr14:47252373-47252021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 229
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr14:12342982-12342614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 341
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr14:14949354-14948986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr14:16760259-16760640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 187
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr14:3868571-3868152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 227
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr14:48689388-48689807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr14:11043634-11043208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 227
               

               
Conread position:
               
3-493
               

               
Cow position:
               
chr14:11508378-11507888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 183
               

               
Conread position:
               
3-503
               

               
Cow position:
               
chr14:17013380-17013872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
3-522
               

               
Cow position:
               
chr14:36437629-36437101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 227
               

               
Conread position:
               
3-557
               

               
Cow position:
               
chr14:2937501-2938060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 192
               

               
Conread position:
               
3-593
               

               
Cow position:
               
chr14:20010454-20009865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 297
               

               
Conread position:
               
3-609
               

               
Cow position:
               
chr14:9019901-9020498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 46
               

               
Conread position:
               
3-610
               

               
Cow position:
               
chr14:36555270-36554687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 45
               

               
Conread position:
               
3-614
               

               
Cow position:
               
chr14:18904728-18904128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 47
               

               
Conread position:
               
3-614
               

               
Cow position:
               
chr14:26859877-26859273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 376
               

               
Conread position:
               
3-614
               

               
Cow position:
               
chr14:34199999-34199358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
3-614
               

               
Cow position:
               
chr14:47609724-47609131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 101
               

               
Conread position:
               
4-152
               

               
Cow position:
               
chr14:3795069-3795222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr14:37243537-37243359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
4-191
               

               
Cow position:
               
chr14:44615290-44615098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr14:24537023-24537221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr14:41082602-41082391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr14:40191455-40191656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 114
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr14:14812362-14812148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr14:18937292-18937077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr14:22870788-22870576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr14:6898933-6899159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
81, 170
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr14:6864859-6865103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
81, 71
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr14:33546498-33546255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr14:39415019-39415278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
81, 219
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr14:28153884-28153603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr14:26222597-26222906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
4-432
               

               
Cow position:
               
chr14:24921959-24922399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
4-523
               

               
Cow position:
               
chr14:37103068-37103583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 206
               

               
Conread position:
               
4-610
               

               
Cow position:
               
chr14:44742511-44741915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 123
               

               
Conread position:
               
4-614
               

               
Cow position:
               
chr14:6490842-6490231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 200
               

               
Conread position:
               
5-151
               

               
Cow position:
               
chr14:29903819-29903972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr14:50471923-50471755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr14:4867941-4868118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr14:24597917-24597740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr14:34100943-34101124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr14:48359631-48359813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr14:22202268-22202090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chr14:42422950-42423157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr14:17058451-17058658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr14:16749834-16749615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr14:33578216-33578006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 162
               

               
Conread position:
               
5-214
               

               
Cow position:
               
chr14:37106465-37106675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr14:26172535-26172311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr14:5553179-5553415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 224
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr14:42693845-42693608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 218
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr14:15306265-15306020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 225
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr14:29809154-29809402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr14:12146619-12146368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
82, 223
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr14:27504376-27504106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr14:50414655-50414921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
5-292
               

               
Cow position:
               
chr14:5025140-5025432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 230
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr14:20954544-20954839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
5-303
               

               
Cow position:
               
chr14:37446812-37446524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
82, 216
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr14:20556496-20556798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
69, 146
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr14:40486781-40486488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 215
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr14:12512029-12511727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 77
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr14:33341613-33341932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 132
               

               
Conread position:
               
5-353
               

               
Cow position:
               
chr14:15931735-15932092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
80, 280
               

               
Conread position:
               
5-355
               

               
Cow position:
               
chr14:47276839-47276490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
41, 218
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr14:15313420-15313781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 230
               

               
Conread position:
               
5-385
               

               
Cow position:
               
chr14:50418278-50418648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
82, 153
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr14:27919873-27919489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr14:11846359-11846751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 130
               

               
Conread position:
               
5-425
               

               
Cow position:
               
chr14:11810698-11810284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 167
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr14:14187207-14187639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 12
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr14:19851166-19850726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 108
               

               
Conread position:
               
5-488
               

               
Cow position:
               
chr14:19206726-19207213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 212
               

               
Conread position:
               
5-570
               

               
Cow position:
               
chr14:26442484-26441907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 148
               

               
Conread position:
               
5-577
               

               
Cow position:
               
chr14:8101659-8102215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 42
               

               
Conread position:
               
5-609
               

               
Cow position:
               
chr14:25778954-25779571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
5-612
               

               
Cow position:
               
chr14:44557958-44557371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 147
               

               
Conread position:
               
5-614
               

               
Cow position:
               
chr14:48492937-48492319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 210
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr14:26825051-26825268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr14:15423954-15424172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr14:27884878-27885100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
6-270
               

               
Cow position:
               
chr14:38550618-38550356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
81, 163
               

               
Conread position:
               
6-299
               

               
Cow position:
               
chr14:5995668-5995974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
6-340
               

               
Cow position:
               
chr14:4877364-4877034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 138
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr14:16297656-16297980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr14:8946220-8945862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
6-369
               

               
Cow position:
               
chr14:20302141-20301780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
79, 215
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr14:21498748-21498371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
79, 183
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr14:12667592-12667982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
6-423
               

               
Cow position:
               
chr14:11513765-11513335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 150
               

               
Conread position:
               
6-446
               

               
Cow position:
               
chr14:20932485-20932925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
6-470
               

               
Cow position:
               
chr14:18485392-18484910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 132
               

               
Conread position:
               
6-514
               

               
Cow position:
               
chr14:41809792-41809275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 171
               

               
Conread position:
               
6-614
               

               
Cow position:
               
chr14:39302495-39301901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
71, 5
               

               
Conread position:
               
6-614
               

               
Cow position:
               
chr14:47506981-47507579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 213
               

               
Conread position:
               
7-160
               

               
Cow position:
               
chr14:40875875-40876022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
7-182
               

               
Cow position:
               
chr14:3173862-3173696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr14:7695127-7695533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 150
               

               
Conread position:
               
7-453
               

               
Cow position:
               
chr14:15913690-15913240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
9-173
               

               
Cow position:
               
chr14:21530210-21530044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 140
               

               
Conread position:
               
9-192
               

               
Cow position:
               
chr14:30151970-30152157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 181
               

               
Conread position:
               
9-194
               

               
Cow position:
               
chr14:24732100-24732290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
9-223
               

               
Cow position:
               
chr14:19592321-19592543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
9-246
               

               
Cow position:
               
chr14:22236617-22236383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 130
               

               
Conread position:
               
9-247
               

               
Cow position:
               
chr14:17335486-17335242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr14:12855926-12855658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 127
               

               
Conread position:
               
9-437
               

               
Cow position:
               
chr14:49929880-49929437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 393
               

               
Conread position:
               
9-488
               

               
Cow position:
               
chr14:7290665-7291140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 179
               

               
Conread position:
               
9-593
               

               
Cow position:
               
chr14:22988901-22989488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
9-614
               

               
Cow position:
               
chr14:25681788-25682419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 225
               

               
Conread position:
               
10-177
               

               
Cow position:
               
chr14:21946263-21946422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr14:33066666-33066484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
10-196
               

               
Cow position:
               
chr14:35065553-35065744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr14:38719066-38719299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 198
               

               
Conread position:
               
10-260
               

               
Cow position:
               
chr14:3498680-3498923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr14:27076833-27077245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
60, 274
               

               
Conread position:
               
11-132
               

               
Cow position:
               
chr14:5044542-5044662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
11-208
               

               
Cow position:
               
chr14:11311768-11311569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
11-259
               

               
Cow position:
               
chr14:50337647-50337893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
11-273
               

               
Cow position:
               
chr14:11285447-11285705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
11-614
               

               
Cow position:
               
chr14:47584795-47584174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 166
               

               
Conread position:
               
12-170
               

               
Cow position:
               
chr14:1771089-1770932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr14:2038924-2038666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
258, 51
               

               
Conread position:
               
12-356
               

               
Cow position:
               
chr14:30606051-30605708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 201
               

               
Conread position:
               
13-332
               

               
Cow position:
               
chr14:4203228-4202904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
14-172
               

               
Cow position:
               
chr14:12617623-12617468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
15-239
               

               
Cow position:
               
chr14:45291499-45291281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
17-166
               

               
Cow position:
               
chr14:25284869-25285023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
17-254
               

               
Cow position:
               
chr14:25225601-25225842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
17-437
               

               
Cow position:
               
chr14:48740996-48740588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 200
               

               
Conread position:
               
18-218
               

               
Cow position:
               
chr14:40952141-40952335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 140
               

               
Conread position:
               
18-264
               

               
Cow position:
               
chr14:43192729-43192959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
18-341
               

               
Cow position:
               
chr14:46973313-46973634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 137
               

               
Conread position:
               
19-614
               

               
Cow position:
               
chr14:41479786-41479184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 5
               

               
Conread position:
               
20-247
               

               
Cow position:
               
chr14:7342337-7342557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
20-450
               

               
Cow position:
               
chr14:27305026-27305467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 76
               

               
Conread position:
               
20-614
               

               
Cow position:
               
chr14:38548677-38549269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
21-160
               

               
Cow position:
               
chr14:29632007-29632150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
21-188
               

               
Cow position:
               
chr14:17563802-17563974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
21-192
               

               
Cow position:
               
chr14:33328840-33329011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 45
               

               
Conread position:
               
21-212
               

               
Cow position:
               
chr14:437597-437399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
21-214
               

               
Cow position:
               
chr14:22645648-22645450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
21-217
               

               
Cow position:
               
chr14:4193373-4193172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
21-259
               

               
Cow position:
               
chr14:49727290-49727522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 117
               

               
Conread position:
               
21-356
               

               
Cow position:
               
chr14:27157613-27157291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 113
               

               
Conread position:
               
21-445
               

               
Cow position:
               
chr14:41127784-41128196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 71
               

               
Conread position:
               
22-210
               

               
Cow position:
               
chr14:13379750-13379558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 150
               

               
Conread position:
               
22-218
               

               
Cow position:
               
chr14:7087589-7087796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
22-259
               

               
Cow position:
               
chr14:7067857-7067612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 210
               

               
Conread position:
               
22-401
               

               
Cow position:
               
chr14:14979827-14979441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
22-600
               

               
Cow position:
               
chr14:106683-106125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 46
               

               
Conread position:
               
23-180
               

               
Cow position:
               
chr14:42153525-42153367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
67, 47
               

               
Conread position:
               
23-183
               

               
Cow position:
               
chr14:11576075-11576240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
23-356
               

               
Cow position:
               
chr14:23761761-23762093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
230, 47
               

               
Conread position:
               
23-377
               

               
Cow position:
               
chr14:37447588-37447240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
23-465
               

               
Cow position:
               
chr14:24981324-24981783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 139
               

               
Conread position:
               
24-315
               

               
Cow position:
               
chr14:7421177-7420880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
63, 191
               

               
Conread position:
               
24-571
               

               
Cow position:
               
chr14:19618871-19618327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
24-612
               

               
Cow position:
               
chr14:19188931-19189511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
25-262
               

               
Cow position:
               
chr14:40002098-40001859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 207
               

               
Conread position:
               
25-614
               

               
Cow position:
               
chr14:38920830-38921392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 126
               

               
Conread position:
               
27-194
               

               
Cow position:
               
chr14:18826953-18826782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
27-522
               

               
Cow position:
               
chr14:8989695-8989211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
27-614
               

               
Cow position:
               
chr14:28795554-28796143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
29-212
               

               
Cow position:
               
chr14:9223032-9222843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
34-519
               

               
Cow position:
               
chr14:20712799-20712302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
40-342
               

               
Cow position:
               
chr14:19394252-19394559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
40-614
               

               
Cow position:
               
chr14:9110816-9110260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
43-614
               

               
Cow position:
               
chr14:28091064-28090500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
47-390
               

               
Cow position:
               
chr14:1978164-1977828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
47-557
               

               
Cow position:
               
chr14:43249494-43250001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 155
               

               
Conread position:
               
47-614
               

               
Cow position:
               
chr14:45605001-45605572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
48-499
               

               
Cow position:
               
chr14:9901086-9901531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
49-456
               

               
Cow position:
               
chr14:49021990-49021585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 85
               

               
Conread position:
               
51-570
               

               
Cow position:
               
chr14:27592053-27591518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
51-573
               

               
Cow position:
               
chr14:43453285-43452743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 189
               

               
Conread position:
               
52-247
               

               
Cow position:
               
chr14:803598-803791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
52-302
               

               
Cow position:
               
chr14:18763528-18763285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
52-302
               

               
Cow position:
               
chr14:42436931-42437186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
52-356
               

               
Cow position:
               
chr14:33830210-33830510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
52-380
               

               
Cow position:
               
chr14:8749989-8750315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
163, 39
               

               
Conread position:
               
52-443
               

               
Cow position:
               
chr14:26097781-26097384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 38
               

               
Conread position:
               
52-446
               

               
Cow position:
               
chr14:18657699-18657293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 137
               

               
Conread position:
               
52-446
               

               
Cow position:
               
chr14:44257830-44258221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 243
               

               
Conread position:
               
52-553
               

               
Cow position:
               
chr14:9539279-9538782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
52-612
               

               
Cow position:
               
chr14:22583061-22583613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
53-397
               

               
Cow position:
               
chr14:34983774-34984122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 160
               

               
Conread position:
               
53-441
               

               
Cow position:
               
chr14:4990909-4991293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 224
               

               
Conread position:
               
53-444
               

               
Cow position:
               
chr14:36709043-36709429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 28
               

               
Conread position:
               
53-482
               

               
Cow position:
               
chr14:17238267-17238705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
53-495
               

               
Cow position:
               
chr14:39926119-39926541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
53-614
               

               
Cow position:
               
chr14:39618469-39617911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 218
               

               
Conread position:
               
54-251
               

               
Cow position:
               
chr14:25824607-25824797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
54-351
               

               
Cow position:
               
chr14:5572857-5573150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 11
               

               
Conread position:
               
54-600
               

               
Cow position:
               
chr14:37884008-37883457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 216
               

               
Conread position:
               
55-308
               

               
Cow position:
               
chr14:34331417-34331161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 166
               

               
Conread position:
               
55-320
               

               
Cow position:
               
chr14:27275072-27275335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
55-340
               

               
Cow position:
               
chr14:24607883-24608163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
225, 28
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr14:37131571-37131957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
57-302
               

               
Cow position:
               
chr14:32553395-32553150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
57-419
               

               
Cow position:
               
chr14:19129417-19129791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 283
               

               
Conread position:
               
58-244
               

               
Cow position:
               
chr14:3943638-3943452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 157
               

               
Conread position:
               
59-247
               

               
Cow position:
               
chr14:34399885-34399687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
59-247
               

               
Cow position:
               
chr14:34449058-34448864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 156
               

               
Conread position:
               
59-614
               

               
Cow position:
               
chr14:14316800-14317362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 88
               

               
Conread position:
               
61-246
               

               
Cow position:
               
chr14:15039698-15039508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
62-598
               

               
Cow position:
               
chr14:19863518-19862982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 160
               

               
Conread position:
               
63-441
               

               
Cow position:
               
chr14:31784886-31785275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
68-450
               

               
Cow position:
               
chr14:37679081-37678685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
70-478
               

               
Cow position:
               
chr14:44848446-44848048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
71-309
               

               
Cow position:
               
chr14:46654616-46654379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
71-324
               

               
Cow position:
               
chr14:1859687-1859433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
71-389
               

               
Cow position:
               
chr14:39037151-39037479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
71-406
               

               
Cow position:
               
chr14:19372264-19372610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 233
               

               
Conread position:
               
71-558
               

               
Cow position:
               
chr14:21284555-21285041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
71-613
               

               
Cow position:
               
chr14:27312338-27312912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 226
               

               
Conread position:
               
72-614
               

               
Cow position:
               
chr14:21964063-21964591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
73-443
               

               
Cow position:
               
chr14:4109563-4109169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
75-614
               

               
Cow position:
               
chr14:10090491-10091033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
75-614
               

               
Cow position:
               
chr14:27791478-27792009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 137
               

               
Conread position:
               
76-401
               

               
Cow position:
               
chr14:33309573-33309248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
76-434
               

               
Cow position:
               
chr14:25362278-25362642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
83-349
               

               
Cow position:
               
chr14:48961524-48961789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
196, 69
               

               
Conread position:
               
83-417
               

               
Cow position:
               
chr14:24796491-24796145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
131, 146
               

               
Conread position:
               
83-608
               

               
Cow position:
               
chr14:41180772-41180252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
84-215
               

               
Cow position:
               
chr14:21019215-21019344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
84-272
               

               
Cow position:
               
chr14:8470513-8470318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
84-315
               

               
Cow position:
               
chr14:45718320-45718094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
84-371
               

               
Cow position:
               
chr14:40283561-40283847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 87
               

               
Conread position:
               
84-385
               

               
Cow position:
               
chr14:26490801-26490500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
84-414
               

               
Cow position:
               
chr14:30017342-30017015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 119
               

               
Conread position:
               
84-443
               

               
Cow position:
               
chr14:30661941-30662291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 18
               

               
Conread position:
               
84-445
               

               
Cow position:
               
chr14:44878828-44878480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
193, 62
               

               
Conread position:
               
84-474
               

               
Cow position:
               
chr14:10702896-10702499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
85-367
               

               
Cow position:
               
chr14:12167467-12167188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 135
               

               
Conread position:
               
86-459
               

               
Cow position:
               
chr14:44793856-44794228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
182, 122
               

               
Conread position:
               
86-613
               

               
Cow position:
               
chr14:34666592-34667118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 65
               

               
Conread position:
               
88-388
               

               
Cow position:
               
chr14:32732699-32732999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
88-460
               

               
Cow position:
               
chr14:22966703-22967072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 17
               

               
Conread position:
               
89-502
               

               
Cow position:
               
chr14:40269893-40269478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 80
               

               
Conread position:
               
89-549
               

               
Cow position:
               
chr14:22918299-22918768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 142
               

               
Conread position:
               
90-215
               

               
Cow position:
               
chr14:3665754-3665884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
90-227
               

               
Cow position:
               
chr14:24839730-24839870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
90-280
               

               
Cow position:
               
chr14:23478776-23478958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
182, 55
               

               
Conread position:
               
90-281
               

               
Cow position:
               
chr14:20045501-20045690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
139, 6
               

               
Conread position:
               
90-331
               

               
Cow position:
               
chr14:49767412-49767645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
131, 157
               

               
Conread position:
               
90-337
               

               
Cow position:
               
chr14:12035359-12035603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
189, 62
               

               
Conread position:
               
90-397
               

               
Cow position:
               
chr14:20385036-20384723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
189, 125
               

               
Conread position:
               
90-412
               

               
Cow position:
               
chr14:50055347-50055674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
191, 103
               

               
Conread position:
               
90-416
               

               
Cow position:
               
chr14:25378545-25378214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
90-418
               

               
Cow position:
               
chr14:17841342-17841008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 15
               

               
Conread position:
               
90-418
               

               
Cow position:
               
chr14:29632932-29632604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
90-420
               

               
Cow position:
               
chr14:34355761-34355421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 116
               

               
Conread position:
               
90-446
               

               
Cow position:
               
chr14:35018804-35018449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 155
               

               
Conread position:
               
90-449
               

               
Cow position:
               
chr14:11615272-11614907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
137, 189
               

               
Conread position:
               
90-450
               

               
Cow position:
               
chr14:16834271-16834641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
90-450
               

               
Cow position:
               
chr14:38355137-38355494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 73
               

               
Conread position:
               
90-570
               

               
Cow position:
               
chr14:2967681-2967216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
266, 53
               

               
Conread position:
               
90-611
               

               
Cow position:
               
chr14:35544555-35544044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
90-614
               

               
Cow position:
               
chr14:13426799-13427279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
475, 51
               

               
Conread position:
               
90-614
               

               
Cow position:
               
chr14:20600334-20600861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
90-614
               

               
Cow position:
               
chr14:22381624-22381079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 145
               

               
Conread position:
               
90-614
               

               
Cow position:
               
chr14:25385937-25385411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 53
               

               
Conread position:
               
91-446
               

               
Cow position:
               
chr14:38378966-38379327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 135
               

               
Conread position:
               
91-449
               

               
Cow position:
               
chr14:48412932-48412567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 221
               

               
Conread position:
               
91-611
               

               
Cow position:
               
chr14:8784151-8784647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 26
               

               
Conread position:
               
92-247
               

               
Cow position:
               
chr14:25399020-25399177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
92-311
               

               
Cow position:
               
chr14:3023892-3024108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
189, 124
               

               
Conread position:
               
92-342
               

               
Cow position:
               
chr14:10938162-10937917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
92-397
               

               
Cow position:
               
chr14:16434672-16434363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 134
               

               
Conread position:
               
92-426
               

               
Cow position:
               
chr14:26942257-26942586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr14:17474622-17474264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
92-456
               

               
Cow position:
               
chr14:9837943-9837585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 165
               

               
Conread position:
               
92-570
               

               
Cow position:
               
chr14:39807507-39807031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr14:194108-193593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 80
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr14:15271296-15271820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr14:28992382-28992908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 80
               

               
Conread position:
               
93-549
               

               
Cow position:
               
chr14:1795566-1796027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
187, 51
               

               
Conread position:
               
93-614
               

               
Cow position:
               
chr14:40461538-40462046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
94-445
               

               
Cow position:
               
chr14:23107276-23107632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
135, 123
               

               
Conread position:
               
95-258
               

               
Cow position:
               
chr14:46061896-46062062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
95-460
               

               
Cow position:
               
chr14:35700383-35700753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
95-465
               

               
Cow position:
               
chr14:7582495-7582116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
183, 30
               

               
Conread position:
               
95-508
               

               
Cow position:
               
chr14:33225653-33226072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
160, 120
               

               
Conread position:
               
95-546
               

               
Cow position:
               
chr14:23214648-23215096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 130
               

               
Conread position:
               
96-213
               

               
Cow position:
               
chr14:33643915-33644029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
96-362
               

               
Cow position:
               
chr14:33338520-33338261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
96-471
               

               
Cow position:
               
chr14:9308185-9308558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 74
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr14:26191144-26190886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
101-520
               

               
Cow position:
               
chr14:20468135-20467732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 114
               

               
Conread position:
               
102-391
               

               
Cow position:
               
chr14:29029790-29030080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 44
               

               
Conread position:
               
106-449
               

               
Cow position:
               
chr14:3564249-3564583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 100
               

               
Conread position:
               
109-614
               

               
Cow position:
               
chr14:41454550-41454058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
110-212
               

               
Cow position:
               
chr14:26499574-26499676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-404
               

               
Cow position:
               
chr14:50504375-50504084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
116-212
               

               
Cow position:
               
chr14:18717248-18717344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
116-611
               

               
Cow position:
               
chr14:28137530-28138030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
116-612
               

               
Cow position:
               
chr14:20563259-20562753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
116-612
               

               
Cow position:
               
chr14:24896618-24896116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 94
               

               
Conread position:
               
116-613
               

               
Cow position:
               
chr14:8997329-8997818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
116-613
               

               
Cow position:
               
chr14:12739103-12739604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 56
               

               
Conread position:
               
116-613
               

               
Cow position:
               
chr14:45603534-45604040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
116-613
               

               
Cow position:
               
chr14:48250511-48251012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 56
               

               
Conread position:
               
116-614
               

               
Cow position:
               
chr14:13296670-13297165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 67
               

               
Conread position:
               
117-565
               

               
Cow position:
               
chr14:37791574-37791124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
119-445
               

               
Cow position:
               
chr14:25231672-25231343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 183
               

               
Conread position:
               
119-446
               

               
Cow position:
               
chr14:47591935-47591614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
160, 8
               

               
Conread position:
               
119-501
               

               
Cow position:
               
chr14:6789362-6789734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
212, 31
               

               
Conread position:
               
124-247
               

               
Cow position:
               
chr14:33568968-33569087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
128-445
               

               
Cow position:
               
chr14:15032743-15033062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
132-240
               

               
Cow position:
               
chr14:11073871-11073978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
132-614
               

               
Cow position:
               
chr14:33538945-33538453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 214
               

               
Conread position:
               
133-614
               

               
Cow position:
               
chr14:24893760-24894232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
136-526
               

               
Cow position:
               
chr14:27362035-27362434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 84
               

               
Conread position:
               
136-553
               

               
Cow position:
               
chr14:33326400-33325981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 78
               

               
Conread position:
               
139-394
               

               
Cow position:
               
chr14:6175582-6175838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
140, 71
               

               
Conread position:
               
140-350
               

               
Cow position:
               
chr14:24991115-24991330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
142-297
               

               
Cow position:
               
chr14:6226624-6226472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
137, 72
               

               
Conread position:
               
142-518
               

               
Cow position:
               
chr14:37236508-37236853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
144-614
               

               
Cow position:
               
chr14:49563658-49563190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
145-614
               

               
Cow position:
               
chr14:10912961-10912508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
146-525
               

               
Cow position:
               
chr14:33828167-33828530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 69
               

               
Conread position:
               
146-614
               

               
Cow position:
               
chr14:7558436-7557965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 258
               

               
Conread position:
               
147-495
               

               
Cow position:
               
chr14:46965580-46965916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 29
               

               
Conread position:
               
147-614
               

               
Cow position:
               
chr14:24684126-24683649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
147-614
               

               
Cow position:
               
chr14:41756270-41756732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 57
               

               
Conread position:
               
149-380
               

               
Cow position:
               
chr14:33643772-33643550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
150-614
               

               
Cow position:
               
chr14:10906722-10907200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
151-385
               

               
Cow position:
               
chr14:44234170-44233937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
151-431
               

               
Cow position:
               
chr14:41716126-41716399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
151-600
               

               
Cow position:
               
chr14:46751682-46752115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
152-357
               

               
Cow position:
               
chr14:35819602-35819400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 133
               

               
Conread position:
               
152-612
               

               
Cow position:
               
chr14:12857597-12858062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 58
               

               
Conread position:
               
152-614
               

               
Cow position:
               
chr14:38296271-38295817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 47
               

               
Conread position:
               
154-369
               

               
Cow position:
               
chr14:14580882-14581092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
125, 64
               

               
Conread position:
               
155-291
               

               
Cow position:
               
chr14:35288719-35288852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
83, 120
               

               
Conread position:
               
155-303
               

               
Cow position:
               
chr14:16932094-16932236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 62
               

               
Conread position:
               
155-570
               

               
Cow position:
               
chr14:34221067-34221485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 106
               

               
Conread position:
               
155-571
               

               
Cow position:
               
chr14:36439936-36440334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 15
               

               
Conread position:
               
155-610
               

               
Cow position:
               
chr14:26448761-26449222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
155-610
               

               
Cow position:
               
chr14:39821175-39821643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 45
               

               
Conread position:
               
155-614
               

               
Cow position:
               
chr14:445420-445855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
155-614
               

               
Cow position:
               
chr14:21018123-21018592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 118
               

               
Conread position:
               
156-302
               

               
Cow position:
               
chr14:20361741-20361598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
156-391
               

               
Cow position:
               
chr14:35021908-35022154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
156-515
               

               
Cow position:
               
chr14:37151645-37151264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 50
               

               
Conread position:
               
157-310
               

               
Cow position:
               
chr14:5667869-5667717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
157-441
               

               
Cow position:
               
chr14:7482072-7482357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
158-317
               

               
Cow position:
               
chr14:26456526-26456684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
159-426
               

               
Cow position:
               
chr14:27988664-27988934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 148
               

               
Conread position:
               
160-437
               

               
Cow position:
               
chr14:11820101-11819826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 53
               

               
Conread position:
               
160-517
               

               
Cow position:
               
chr14:8964567-8964926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 56
               

               
Conread position:
               
162-614
               

               
Cow position:
               
chr14:32470647-32471118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
163-293
               

               
Cow position:
               
chr14:4044700-4044826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
163-390
               

               
Cow position:
               
chr14:20483435-20483216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
163-418
               

               
Cow position:
               
chr14:17397572-17397326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
116, 43
               

               
Conread position:
               
164-331
               

               
Cow position:
               
chr14:3836142-3836304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
6, 50
               

               
Conread position:
               
164-613
               

               
Cow position:
               
chr14:8754342-8754801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 159
               

               
Conread position:
               
168-464
               

               
Cow position:
               
chr14:26118033-26118334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
169-363
               

               
Cow position:
               
chr14:21230631-21230825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
169-601
               

               
Cow position:
               
chr14:35266983-35266554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 14
               

               
Conread position:
               
169-614
               

               
Cow position:
               
chr14:33462191-33462630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
170-419
               

               
Cow position:
               
chr14:39422564-39422307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
170-422
               

               
Cow position:
               
chr14:24785974-24786215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
170-445
               

               
Cow position:
               
chr14:14280440-14280723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 70
               

               
Conread position:
               
170-536
               

               
Cow position:
               
chr14:3878490-3878847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 46
               

               
Conread position:
               
170-609
               

               
Cow position:
               
chr14:24991851-24992282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 47
               

               
Conread position:
               
170-610
               

               
Cow position:
               
chr14:24580957-24581409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
170-613
               

               
Cow position:
               
chr14:23055641-23056078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
170-614
               

               
Cow position:
               
chr14:40347132-40346703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 47
               

               
Conread position:
               
171-556
               

               
Cow position:
               
chr14:37624458-37624071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
173-314
               

               
Cow position:
               
chr14:37467730-37467590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
173-427
               

               
Cow position:
               
chr14:23464784-23464527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
173-610
               

               
Cow position:
               
chr14:35651161-35650731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
174-320
               

               
Cow position:
               
chr14:44731137-44731288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
174-341
               

               
Cow position:
               
chr14:50518936-50518776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
174-369
               

               
Cow position:
               
chr14:37435270-37435069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
174-450
               

               
Cow position:
               
chr14:11748877-11748611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
174-612
               

               
Cow position:
               
chr14:11981670-11982126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
174-614
               

               
Cow position:
               
chr14:44383176-44382723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 237
               

               
Conread position:
               
175-336
               

               
Cow position:
               
chr14:38673598-38673438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
176-289
               

               
Cow position:
               
chr14:19513378-19513265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
176-582
               

               
Cow position:
               
chr14:12250161-12249758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
179-521
               

               
Cow position:
               
chr14:4649973-4649641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
180-614
               

               
Cow position:
               
chr14:6419263-6418835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
184-391
               

               
Cow position:
               
chr14:10721685-10721483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 33
               

               
Conread position:
               
192-442
               

               
Cow position:
               
chr14:35712131-35711877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
203-439
               

               
Cow position:
               
chr14:23154827-23154584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
205-383
               

               
Cow position:
               
chr14:42277006-42277182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
205-613
               

               
Cow position:
               
chr14:37228043-37227638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
207-613
               

               
Cow position:
               
chr14:39711020-39710606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 217
               

               
Conread position:
               
208-342
               

               
Cow position:
               
chr14:17563972-17564109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
208-379
               

               
Cow position:
               
chr14:22952929-22952758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 124
               

               
Conread position:
               
208-498
               

               
Cow position:
               
chr14:31888637-31888356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 85
               

               
Conread position:
               
209-502
               

               
Cow position:
               
chr14:12488633-12488327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
161, 135
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr14:29606166-29605934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
165, 73
               

               
Conread position:
               
216-614
               

               
Cow position:
               
chr14:12614021-12613660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 134
               

               
Conread position:
               
216-614
               

               
Cow position:
               
chr14:44252983-44253371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
155, 63
               

               
Conread position:
               
217-449
               

               
Cow position:
               
chr14:36151480-36151703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
230, 81
               

               
Conread position:
               
217-501
               

               
Cow position:
               
chr14:7316901-7317198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
218-439
               

               
Cow position:
               
chr14:19624160-19624390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
218-596
               

               
Cow position:
               
chr14:18913390-18913768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
220-369
               

               
Cow position:
               
chr14:28924462-28924612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
221-614
               

               
Cow position:
               
chr14:20069438-20069042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 62
               

               
Conread position:
               
221-614
               

               
Cow position:
               
chr14:47483771-47484178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
222-614
               

               
Cow position:
               
chr14:12484221-12483838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
223-614
               

               
Cow position:
               
chr14:46735384-46735791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 284
               

               
Conread position:
               
228-614
               

               
Cow position:
               
chr14:5502077-5501677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
229-455
               

               
Cow position:
               
chr14:19996402-19996639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
230-614
               

               
Cow position:
               
chr14:39518782-39519181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
232-342
               

               
Cow position:
               
chr14:8936562-8936449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
232-428
               

               
Cow position:
               
chr14:8006238-8006049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
232-445
               

               
Cow position:
               
chr14:23819199-23818990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
112, 48
               

               
Conread position:
               
232-533
               

               
Cow position:
               
chr14:41190787-41190502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
234-440
               

               
Cow position:
               
chr14:29884976-29884766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
234-613
               

               
Cow position:
               
chr14:34675929-34675543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 156
               

               
Conread position:
               
235-392
               

               
Cow position:
               
chr14:26470719-26470882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
239-429
               

               
Cow position:
               
chr14:47385741-47385925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
241-468
               

               
Cow position:
               
chr14:11641472-11641247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
245-471
               

               
Cow position:
               
chr14:16310803-16310585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
254-404
               

               
Cow position:
               
chr14:24840065-24839913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
254-441
               

               
Cow position:
               
chr14:34330655-34330841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
254-601
               

               
Cow position:
               
chr14:31399682-31400051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
255-614
               

               
Cow position:
               
chr14:15781825-15781453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
258-524
               

               
Cow position:
               
chr14:1796405-1796676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
268-556
               

               
Cow position:
               
chr14:35509840-35509558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
270-441
               

               
Cow position:
               
chr14:34329527-34329357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
279-459
               

               
Cow position:
               
chr14:19106009-19106192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
282-564
               

               
Cow position:
               
chr14:21569738-21570019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 5
               

               
Conread position:
               
288-614
               

               
Cow position:
               
chr14:35360345-35360682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 129
               

               
Conread position:
               
294-614
               

               
Cow position:
               
chr14:45300674-45300354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 160
               

               
Conread position:
               
297-614
               

               
Cow position:
               
chr14:37331677-37332005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 73
               

               
Conread position:
               
298-614
               

               
Cow position:
               
chr14:19513221-19512913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 126
               

               
Conread position:
               
300-495
               

               
Cow position:
               
chr14:36585801-36585604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
66, 154
               
Show alignments to all cow chromosomes.