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Cow genome map

           
Conread name:
           
rpliv0131_d19.y1
        

               
Conread position:
               
1-120
               

               
Cow position:
               
chr15:43590117-43590241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-130
               

               
Cow position:
               
chr15:22474558-22474684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr15:38228040-38228177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr15:26380842-26380702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr15:14760735-14760593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr15:41049552-41049415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr15:840242-840099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr15:33729790-33729942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr15:20566033-20566184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr15:4284276-4284428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr15:15147303-15147160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 109
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr15:30956419-30956267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr15:10332906-10333075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr15:40562778-40562616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr15:8715277-8715115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr15:18941939-18942097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr15:25366160-25365994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 128
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr15:21520047-21520221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr15:44809971-44810139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr15:52192879-52192712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr15:5964208-5964035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 153
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr15:48351035-48351195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr15:14880427-14880271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr15:26617840-26618011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr15:9314631-9314799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 85
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr15:16415201-16415370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr15:48052693-48052531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr15:41321047-41320876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
137, 81
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr15:4500603-4500781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr15:16230134-16230300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr15:21942957-21943133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr15:25358138-25358313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr15:43634125-43633954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr15:12974239-12974420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr15:11564204-11564378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr15:27975969-27975786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr15:52791845-52792021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 89
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr15:17621416-17621235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:9921859-9921680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:28099017-28099200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:29793297-29793105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr15:12045636-12045446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr15:25595622-25595437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr15:44977718-44977907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr15:36346699-36346878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr15:35577098-35577304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr15:49230408-49230218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr15:7479094-7478890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr15:19002378-19002170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr15:39474030-39473828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
84, 146
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr15:12913594-12913390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr15:22444082-22443878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
89, 147
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr15:26529800-26530000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr15:4248053-4248259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr15:42353302-42353497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr15:26442119-26442327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr15:2931666-2931451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr15:10880976-10880768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr15:42380833-42381044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr15:24462427-24462645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr15:28957247-28957463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 177
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr15:37970708-37970931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr15:50953760-50953548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 120
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr15:21903502-21903289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr15:38652698-38652476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 109
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr15:49483531-49483754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 188
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr15:6037541-6037330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr15:26851319-26851097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
159, 64
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr15:31637200-31637430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr15:8464228-8464000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 222
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr15:15154204-15154431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr15:41056304-41056072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr15:47844183-47843958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
208, 11
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr15:36388204-36388431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:20950157-20950395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
63, 151
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr15:3695542-3695784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
220, 55
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr15:36952294-36952050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr15:52316965-52317208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
212, 51
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr15:38827410-38827174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr15:43114813-43114571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr15:19554021-19553771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr15:19942502-19942753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
215, 79
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr15:15177222-15177470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:8549593-8549325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:20723077-20722827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:39299412-39299159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 64
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr15:1990008-1990270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr15:18073623-18073883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr15:26522920-26522672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
82, 155
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr15:31042787-31043031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
153, 51
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr15:36846282-36846012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 158
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr15:42888930-42888675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
86, 165
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr15:53028267-53028540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr15:29541770-29542054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
46, 254
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr15:41528061-41527802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr15:25349879-25350142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr15:29686467-29686729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
213, 14
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:28047856-28047573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr15:10400370-10400083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
80, 220
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:9465579-9465870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 240
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr15:14888732-14888443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
115, 51
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr15:19950391-19950672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
219, 35
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr15:40379117-40379414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 146
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr15:52126785-52126489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr15:5408989-5408696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
262, 81
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr15:20314387-20314691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr15:5717624-5717921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr15:1857631-1857942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr15:33178521-33178209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr15:51307765-51307464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
279, 50
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr15:662559-662251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 56
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr15:30471074-30470752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 214
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr15:1502818-1503125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 130
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr15:31928993-31928669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr15:49273867-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 56
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr15:915946-915612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 225
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr15:34896666-34896997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr15:38837649-38837986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 168
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr15:28823907-28823581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr15:4418497-4418162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 217
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr15:8353946-8354289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr15:53037057-53036720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
220, 81
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr15:275548-275894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr15:25906823-25907159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
204, 69
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr15:4179034-4178683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 71
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr15:39373550-39373173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
56, 238
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr15:41125652-41125311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
112, 14
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr15:16657375-16657758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 230
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr15:2141417-2141033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
45, 276
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr15:14576235-14576604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr15:21583022-21582649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 195
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr15:244687-245047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr15:32324303-32323932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 151
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr15:85341-84972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr15:36887744-36888102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
279, 110
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr15:2968239-2968620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 51
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr15:45584627-45585015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 155
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr15:5072193-5071801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 187
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr15:1722936-1722548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
278, 81
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr15:20290153-20289768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr15:11996123-11995705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr15:27900600-27900185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr15:50322516-50322920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 28
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr15:225898-225477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 100
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr15:12304544-12304968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr15:49922040-49922466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 61
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr15:35112968-35112560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr15:41225667-41225231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
71, 149
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr15:26158694-26158284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 161
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr15:10246090-10245670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 132
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr15:29810030-29810449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr15:39599354-39599780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr15:8665702-8665240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr15:22553636-22553178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr15:12722989-12723425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 172
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr15:27973301-27972868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr15:39405647-39406081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 82
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr15:40957483-40957928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 103
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr15:22531578-22532011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 55
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr15:14020402-14020823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 65
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr15:19771042-19771479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr15:2799904-2800319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
188, 55
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr15:16822855-16823289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 11
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr15:21941943-21941495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 140
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr15:1297651-1298093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 14
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr15:21893685-21894139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr15:21803760-21803294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 124
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr15:34139896-34140343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 14
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr15:36259692-36259225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 43
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr15:44051576-44051133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 69
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr15:21420852-21421328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr15:22939419-22938931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr15:26753083-26752598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr15:29026978-29026459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 166
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr15:39490756-39490222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 209
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr15:30981857-30982345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr15:47990861-47990326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 89
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr15:45521-44977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr15:16543533-16543017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 28
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr15:26896794-26896274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 199
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr15:4789062-4788497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 79
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr15:22530986-22531524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 65
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr15:23798617-23798050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr15:50177032-50177573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 52
               

               
Conread position:
               
1-588
               

               
Cow position:
               
chr15:8579232-8578633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 136
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr15:20370547-20369965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
1-597
               

               
Cow position:
               
chr15:17196050-17196648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 216
               

               
Conread position:
               
1-599
               

               
Cow position:
               
chr15:24797898-24797297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 67
               

               
Conread position:
               
1-600
               

               
Cow position:
               
chr15:608048-608662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 220
               

               
Conread position:
               
1-610
               

               
Cow position:
               
chr15:795112-794496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 70
               

               
Conread position:
               
1-610
               

               
Cow position:
               
chr15:20422860-20422246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
1-611
               

               
Cow position:
               
chr15:43827867-43827259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 133
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr15:1330204-1329587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 217
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr15:30047649-30047018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 167
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr15:36391576-36392181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 214
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr15:4919165-4918540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:1301051-1301661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 81
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:4138039-4138651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:6647355-6647969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:6905444-6906073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 57
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:6969892-6970498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:7429871-7430503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 219
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:17233091-17233704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 218
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:18017832-18018449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:20390805-20390181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:20534548-20533929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 261
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:24967706-24968308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 87
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:25667320-25666694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 220
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:28924857-28924246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:35839192-35838550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 225
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:36435107-36435725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 209
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:37381534-37382144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:40798513-40797909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:42142778-42143370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 89
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:45245636-45245034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:47821738-47822306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 56
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr15:50957906-50957272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 228
               

               
Conread position:
               
2-140
               

               
Cow position:
               
chr15:22242308-22242450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr15:15680938-15680788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
2-161
               

               
Cow position:
               
chr15:16644882-16644719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr15:28705621-28705451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr15:33751195-33751024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr15:5691008-5691182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 141
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr15:28067800-28067627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr15:17124565-17124382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr15:38386492-38386674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr15:37719682-37719503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
90, 60
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr15:44402044-44401860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr15:7956173-7955966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr15:48095262-48095467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 159
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr15:21363047-21362847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 61
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr15:4076237-4076474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr15:8127815-8128070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 226
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr15:6427740-6427468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 92
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr15:41624991-41624717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
88, 205
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr15:13432388-13432665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 259
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr15:37865265-37865567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 286
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr15:35419688-35419375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 122
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr15:5158277-5158582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 232
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr15:43674040-43673699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr15:18671543-18671203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr15:4295665-4296016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 229
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr15:8610428-8610062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 186
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr15:23572783-23572419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
2-371
               

               
Cow position:
               
chr15:23275439-23275813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 224
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr15:20279492-20279112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 220
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr15:20286091-20285711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
71, 220
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr15:33642996-33643373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
2-388
               

               
Cow position:
               
chr15:10608403-10608010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr15:26919363-26918972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr15:39598151-39598560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 88
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr15:22938861-22938449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 222
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr15:30001602-30002024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 213
               

               
Conread position:
               
2-441
               

               
Cow position:
               
chr15:35641918-35642368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 117
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr15:286378-286810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 256
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr15:16928184-16927727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr15:28141168-28140714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
178, 215
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr15:48851587-48851131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
2-526
               

               
Cow position:
               
chr15:47803439-47803960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
2-556
               

               
Cow position:
               
chr15:43626371-43626919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
2-571
               

               
Cow position:
               
chr15:46563571-46563000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 78
               

               
Conread position:
               
2-612
               

               
Cow position:
               
chr15:20459405-20458783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 221
               

               
Conread position:
               
2-612
               

               
Cow position:
               
chr15:25208853-25208248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr15:6227270-6226674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 15
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr15:16112300-16112928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 229
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr15:17268711-17268104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 52
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr15:24616473-24617084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 221
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr15:26079440-26078847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 80
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr15:38161906-38162528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
3-156
               

               
Cow position:
               
chr15:17227022-17226861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr15:39892921-39892752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr15:44089258-44089081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr15:17853811-17853639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr15:4334004-4333837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr15:34552984-34552801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 160
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr15:25877347-25877532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr15:6082693-6082501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 186
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr15:14811120-14811313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr15:9062667-9062469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr15:33662418-33662627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr15:1284168-1284389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr15:18718555-18718341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 205
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr15:7751007-7750793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr15:12546332-12546097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr15:32984487-32984714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 192
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr15:20856572-20856339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr15:28187341-28187574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 124
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr15:31416264-31416021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 117
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr15:31028753-31028510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
84, 230
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr15:8679852-8679601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 181
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr15:25571905-25571658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 227
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr15:38860225-38859979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
77, 175
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr15:23901470-23901206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 235
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr15:13783061-13782805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr15:27230670-27230938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr15:50552627-50552352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
86, 121
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr15:36776176-36776451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
89, 129
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr15:35425885-35425626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
277, 49
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr15:36635936-36636244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 210
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr15:39326594-39326297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 44
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr15:24804893-24804568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 202
               

               
Conread position:
               
3-341
               

               
Cow position:
               
chr15:36643939-36643611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr15:21822020-21821674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 215
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr15:16667591-16667243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 130
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr15:31137558-31137173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 214
               

               
Conread position:
               
3-443
               

               
Cow position:
               
chr15:12785336-12785786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
3-445
               

               
Cow position:
               
chr15:17100797-17100364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr15:2953226-2952777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr15:51427919-51427460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 65
               

               
Conread position:
               
3-480
               

               
Cow position:
               
chr15:5420975-5420517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
3-485
               

               
Cow position:
               
chr15:53101491-53101980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 224
               

               
Conread position:
               
3-488
               

               
Cow position:
               
chr15:17084113-17084604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 263
               

               
Conread position:
               
3-507
               

               
Cow position:
               
chr15:52482922-52482415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 77
               

               
Conread position:
               
3-507
               

               
Cow position:
               
chr15:53163927-53164433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 77
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr15:4485055-4485562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 202
               

               
Conread position:
               
3-593
               

               
Cow position:
               
chr15:22532160-22532733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 176
               

               
Conread position:
               
3-612
               

               
Cow position:
               
chr15:43031119-43030503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 140
               

               
Conread position:
               
3-614
               

               
Cow position:
               
chr15:16603736-16604351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 56
               

               
Conread position:
               
3-614
               

               
Cow position:
               
chr15:30799804-30800403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 65
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr15:15511914-15512096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-223
               

               
Cow position:
               
chr15:38811829-38811609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 137
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr15:11614187-11613941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr15:39833070-39832795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr15:5719897-5719621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr15:14474248-14474532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
81, 222
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr15:6233107-6232811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
126, 84
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr15:34284502-34284205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr15:44658274-44658664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 64
               

               
Conread position:
               
4-439
               

               
Cow position:
               
chr15:34478596-34479029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 279
               

               
Conread position:
               
4-593
               

               
Cow position:
               
chr15:51822058-51822640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 208
               

               
Conread position:
               
4-614
               

               
Cow position:
               
chr15:19402913-19403507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
4-614
               

               
Cow position:
               
chr15:52778616-52778014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 123
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr15:25845980-25846131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr15:18827735-18827573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr15:21710201-21710024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr15:44449842-44450021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr15:51315975-51316157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr15:5627128-5626947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr15:29927873-29928055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 116
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr15:22124886-22124697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr15:38420646-38420453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 156
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr15:37069979-37069775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 200
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr15:31542149-31542355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 113
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr15:867600-867387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr15:22984477-22984692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr15:15738292-15738507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr15:13701863-13701635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr15:697888-698124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 220
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr15:34273707-34273946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 223
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr15:15986984-15986722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 231
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr15:41053862-41053604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 99
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr15:43851678-43851410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
80, 163
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr15:40231027-40231293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 185
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr15:26942332-26942622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr15:10231834-10231515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 80
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr15:36353578-36353896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
5-335
               

               
Cow position:
               
chr15:7308249-7307914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr15:4861998-4861654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 216
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr15:41045311-41045683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr15:16439925-16439540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 220
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr15:22930441-22930047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
5-390
               

               
Cow position:
               
chr15:1804424-1804031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr15:44436666-44437033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
5-398
               

               
Cow position:
               
chr15:6168624-6168210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
80, 153
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr15:8006887-8007287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 132
               

               
Conread position:
               
5-412
               

               
Cow position:
               
chr15:10088228-10088633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
5-417
               

               
Cow position:
               
chr15:26903102-26903519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 49
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr15:17762817-17763226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr15:38394336-38394747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 214
               

               
Conread position:
               
5-431
               

               
Cow position:
               
chr15:31857498-31857930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr15:38883051-38883509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
5-471
               

               
Cow position:
               
chr15:36621309-36621797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
5-564
               

               
Cow position:
               
chr15:20472635-20472075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 79
               

               
Conread position:
               
5-576
               

               
Cow position:
               
chr15:32980125-32979548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
5-587
               

               
Cow position:
               
chr15:27123626-27123056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 134
               

               
Conread position:
               
5-592
               

               
Cow position:
               
chr15:45478908-45479507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 258
               

               
Conread position:
               
5-612
               

               
Cow position:
               
chr15:1083461-1082868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 9
               

               
Conread position:
               
5-614
               

               
Cow position:
               
chr15:5235082-5234485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 27
               

               
Conread position:
               
6-166
               

               
Cow position:
               
chr15:13876807-13876647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-172
               

               
Cow position:
               
chr15:33382488-33382660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
6-181
               

               
Cow position:
               
chr15:13863825-13863645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 117
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr15:42704707-42704889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 107
               

               
Conread position:
               
6-210
               

               
Cow position:
               
chr15:16489589-16489374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr15:8766887-8766675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 157
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr15:6102251-6102042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 116
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr15:864088-864309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr15:52929-53168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 205
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr15:49392408-49392647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
6-256
               

               
Cow position:
               
chr15:8444382-8444628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr15:38935314-38935605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 118
               

               
Conread position:
               
6-309
               

               
Cow position:
               
chr15:11424883-11425179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 141
               

               
Conread position:
               
6-489
               

               
Cow position:
               
chr15:8961933-8962394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 89
               

               
Conread position:
               
6-497
               

               
Cow position:
               
chr15:5984677-5984198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 202
               

               
Conread position:
               
7-199
               

               
Cow position:
               
chr15:31613850-31614047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 112
               

               
Conread position:
               
8-161
               

               
Cow position:
               
chr15:11320888-11320730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
8-183
               

               
Cow position:
               
chr15:32205248-32205070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr15:13395460-13395700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
81, 140
               

               
Conread position:
               
8-614
               

               
Cow position:
               
chr15:7192333-7191735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 48
               

               
Conread position:
               
9-172
               

               
Cow position:
               
chr15:25333468-25333301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 110
               

               
Conread position:
               
9-177
               

               
Cow position:
               
chr15:16246507-16246679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chr15:23075065-23074890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
9-184
               

               
Cow position:
               
chr15:8978229-8978401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
9-206
               

               
Cow position:
               
chr15:52445729-52445930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 101
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr15:16530858-16530652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 198
               

               
Conread position:
               
9-214
               

               
Cow position:
               
chr15:13554019-13554228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 177
               

               
Conread position:
               
9-214
               

               
Cow position:
               
chr15:31491154-31490944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr15:52432251-52432473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
9-278
               

               
Cow position:
               
chr15:49950577-49950839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
200, 67
               

               
Conread position:
               
9-349
               

               
Cow position:
               
chr15:32241888-32242231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 224
               

               
Conread position:
               
9-464
               

               
Cow position:
               
chr15:31283295-31283739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 203
               

               
Conread position:
               
9-476
               

               
Cow position:
               
chr15:38806592-38806116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 202
               

               
Conread position:
               
9-479
               

               
Cow position:
               
chr15:23180358-23180808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 59
               

               
Conread position:
               
9-614
               

               
Cow position:
               
chr15:5499111-5498511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 140
               

               
Conread position:
               
9-614
               

               
Cow position:
               
chr15:21832527-21831903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
10-172
               

               
Cow position:
               
chr15:7916651-7916484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
10-262
               

               
Cow position:
               
chr15:40015091-40014834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 223
               

               
Conread position:
               
11-172
               

               
Cow position:
               
chr15:33525379-33525544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
11-182
               

               
Cow position:
               
chr15:13184706-13184533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 107
               

               
Conread position:
               
11-251
               

               
Cow position:
               
chr15:41023706-41023464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 214
               

               
Conread position:
               
11-355
               

               
Cow position:
               
chr15:11560603-11560251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 220
               

               
Conread position:
               
11-441
               

               
Cow position:
               
chr15:6462578-6462154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 45
               

               
Conread position:
               
11-540
               

               
Cow position:
               
chr15:25585177-25584633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
12-246
               

               
Cow position:
               
chr15:4694663-4694895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
12-324
               

               
Cow position:
               
chr15:17337285-17337586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
268, 70
               

               
Conread position:
               
13-612
               

               
Cow position:
               
chr15:26912156-26911562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
17-145
               

               
Cow position:
               
chr15:32300295-32300429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
17-202
               

               
Cow position:
               
chr15:13674266-13674082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
17-202
               

               
Cow position:
               
chr15:39520078-39520276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
17-219
               

               
Cow position:
               
chr15:38862014-38862219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 138
               

               
Conread position:
               
17-223
               

               
Cow position:
               
chr15:24453156-24452945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr15:18975845-18975525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
17-341
               

               
Cow position:
               
chr15:5726233-5726569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 207
               

               
Conread position:
               
17-488
               

               
Cow position:
               
chr15:19186697-19186223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
17-557
               

               
Cow position:
               
chr15:18605325-18605844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 208
               

               
Conread position:
               
17-613
               

               
Cow position:
               
chr15:31948924-31949520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 147
               

               
Conread position:
               
17-614
               

               
Cow position:
               
chr15:30985855-30985276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
18-300
               

               
Cow position:
               
chr15:12358957-12359240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 6
               

               
Conread position:
               
18-340
               

               
Cow position:
               
chr15:50265566-50265246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 206
               

               
Conread position:
               
18-441
               

               
Cow position:
               
chr15:50341035-50341456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 140
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr15:36793574-36793297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 242
               

               
Conread position:
               
20-308
               

               
Cow position:
               
chr15:50664546-50664274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
259, 48
               

               
Conread position:
               
20-333
               

               
Cow position:
               
chr15:10512345-10512034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
20-349
               

               
Cow position:
               
chr15:11559430-11559104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
20-420
               

               
Cow position:
               
chr15:21907867-21908261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
260, 63
               

               
Conread position:
               
20-481
               

               
Cow position:
               
chr15:24128583-24129035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 183
               

               
Conread position:
               
20-614
               

               
Cow position:
               
chr15:32226942-32226367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 50
               

               
Conread position:
               
21-178
               

               
Cow position:
               
chr15:45160384-45160223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
21-242
               

               
Cow position:
               
chr15:9837838-9838062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 204
               

               
Conread position:
               
21-309
               

               
Cow position:
               
chr15:23866147-23865855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 212
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr15:38037023-38036698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
21-341
               

               
Cow position:
               
chr15:16017958-16018279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 211
               

               
Conread position:
               
21-581
               

               
Cow position:
               
chr15:5571707-5571145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 181
               

               
Conread position:
               
22-167
               

               
Cow position:
               
chr15:33784901-33784746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
22-258
               

               
Cow position:
               
chr15:12203472-12203712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 203
               

               
Conread position:
               
22-610
               

               
Cow position:
               
chr15:47274290-47274876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 107
               

               
Conread position:
               
23-188
               

               
Cow position:
               
chr15:3591323-3591484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
23-342
               

               
Cow position:
               
chr15:25386365-25386688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
23-380
               

               
Cow position:
               
chr15:36773761-36773407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 49
               

               
Conread position:
               
23-456
               

               
Cow position:
               
chr15:43914171-43913721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 159
               

               
Conread position:
               
23-554
               

               
Cow position:
               
chr15:20487283-20486748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 195
               

               
Conread position:
               
25-327
               

               
Cow position:
               
chr15:9106970-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 26
               

               
Conread position:
               
27-167
               

               
Cow position:
               
chr15:16892475-16892617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
30-181
               

               
Cow position:
               
chr15:28603673-28603517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
31-434
               

               
Cow position:
               
chr15:39621266-39621679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 307
               

               
Conread position:
               
34-262
               

               
Cow position:
               
chr15:14176565-14176334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 189
               

               
Conread position:
               
34-299
               

               
Cow position:
               
chr15:7662022-7661745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 210
               

               
Conread position:
               
36-614
               

               
Cow position:
               
chr15:14505377-14505946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 36
               

               
Conread position:
               
40-442
               

               
Cow position:
               
chr15:51898169-51898573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 182
               

               
Conread position:
               
41-614
               

               
Cow position:
               
chr15:22095082-22095628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
42-211
               

               
Cow position:
               
chr15:6129020-6128850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
42-429
               

               
Cow position:
               
chr15:35945473-35945878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
47-416
               

               
Cow position:
               
chr15:26573328-26573711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 173
               

               
Conread position:
               
47-487
               

               
Cow position:
               
chr15:24941414-24940992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 45
               

               
Conread position:
               
52-203
               

               
Cow position:
               
chr15:18776799-18776642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
52-236
               

               
Cow position:
               
chr15:44280055-44280242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
52-239
               

               
Cow position:
               
chr15:14281506-14281694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
52-288
               

               
Cow position:
               
chr15:12601-12843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 229
               

               
Conread position:
               
52-310
               

               
Cow position:
               
chr15:35205198-35204934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
52-349
               

               
Cow position:
               
chr15:10737779-10737496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
52-356
               

               
Cow position:
               
chr15:23598363-23598048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
52-366
               

               
Cow position:
               
chr15:22871567-22871880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
52-376
               

               
Cow position:
               
chr15:39316889-39316554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 210
               

               
Conread position:
               
52-446
               

               
Cow position:
               
chr15:33303285-33303686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 26
               

               
Conread position:
               
52-449
               

               
Cow position:
               
chr15:36782372-36781980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
52-560
               

               
Cow position:
               
chr15:13554307-13554807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
52-614
               

               
Cow position:
               
chr15:10335709-10336268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
52-614
               

               
Cow position:
               
chr15:33976742-33976171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 208
               

               
Conread position:
               
53-228
               

               
Cow position:
               
chr15:40368244-40368424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
53-232
               

               
Cow position:
               
chr15:14261303-14261124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 115
               

               
Conread position:
               
53-298
               

               
Cow position:
               
chr15:23780113-23779869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
53-337
               

               
Cow position:
               
chr15:5566887-5567183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
55-233
               

               
Cow position:
               
chr15:23719527-23719344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
55-285
               

               
Cow position:
               
chr15:35441122-35440886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
55-308
               

               
Cow position:
               
chr15:5929853-5930104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
55-517
               

               
Cow position:
               
chr15:41000113-40999628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
55-584
               

               
Cow position:
               
chr15:42415210-42415757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 170
               

               
Conread position:
               
57-612
               

               
Cow position:
               
chr15:50302142-50302721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr15:52454391-52454815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 164
               

               
Conread position:
               
66-334
               

               
Cow position:
               
chr15:12870897-12870626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 154
               

               
Conread position:
               
68-219
               

               
Cow position:
               
chr15:5535391-5535235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
71-245
               

               
Cow position:
               
chr15:6272915-6272739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
71-260
               

               
Cow position:
               
chr15:9497528-9497336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 151
               

               
Conread position:
               
71-290
               

               
Cow position:
               
chr15:17664267-17664056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
71-314
               

               
Cow position:
               
chr15:9781443-9781684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
71-614
               

               
Cow position:
               
chr15:13284998-13285569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 145
               

               
Conread position:
               
72-440
               

               
Cow position:
               
chr15:22136663-22137030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
72-611
               

               
Cow position:
               
chr15:34207214-34206683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
75-439
               

               
Cow position:
               
chr15:21836665-21837035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
76-443
               

               
Cow position:
               
chr15:45322763-45323133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr15:45216818-45217152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
201, 72
               

               
Conread position:
               
81-380
               

               
Cow position:
               
chr15:9970991-9970696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
137, 85
               

               
Conread position:
               
82-446
               

               
Cow position:
               
chr15:6657087-6657458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 33
               

               
Conread position:
               
83-610
               

               
Cow position:
               
chr15:9871430-9870898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
83-614
               

               
Cow position:
               
chr15:33624946-33625494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 80
               

               
Conread position:
               
84-256
               

               
Cow position:
               
chr15:19920343-19920175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
84-303
               

               
Cow position:
               
chr15:28258467-28258248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 62
               

               
Conread position:
               
84-614
               

               
Cow position:
               
chr15:17261174-17260643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
84-614
               

               
Cow position:
               
chr15:44640886-44641416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 133
               

               
Conread position:
               
84-614
               

               
Cow position:
               
chr15:47843261-47842747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 171
               

               
Conread position:
               
85-273
               

               
Cow position:
               
chr15:4508138-4508325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
85-449
               

               
Cow position:
               
chr15:37931768-37931413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
130, 74
               

               
Conread position:
               
86-533
               

               
Cow position:
               
chr15:13387069-13387520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 75
               

               
Conread position:
               
86-570
               

               
Cow position:
               
chr15:26421604-26421124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 10
               

               
Conread position:
               
87-541
               

               
Cow position:
               
chr15:25111178-25110718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 67
               

               
Conread position:
               
87-614
               

               
Cow position:
               
chr15:16639770-16640313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 131
               

               
Conread position:
               
89-554
               

               
Cow position:
               
chr15:6385360-6385819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 122
               

               
Conread position:
               
89-614
               

               
Cow position:
               
chr15:22168067-22168584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 39
               

               
Conread position:
               
90-259
               

               
Cow position:
               
chr15:17162191-17162353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
90-302
               

               
Cow position:
               
chr15:31560392-31560196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
190, 52
               

               
Conread position:
               
90-313
               

               
Cow position:
               
chr15:39782959-39783174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
185, 33
               

               
Conread position:
               
90-330
               

               
Cow position:
               
chr15:43599185-43599418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
190, 126
               

               
Conread position:
               
90-341
               

               
Cow position:
               
chr15:43788258-43788488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 53
               

               
Conread position:
               
90-410
               

               
Cow position:
               
chr15:22886555-22886866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
193, 6
               

               
Conread position:
               
90-445
               

               
Cow position:
               
chr15:4534907-4535259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 44
               

               
Conread position:
               
90-451
               

               
Cow position:
               
chr15:35417629-35417262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 126
               

               
Conread position:
               
90-479
               

               
Cow position:
               
chr15:16307418-16307802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 26
               

               
Conread position:
               
90-610
               

               
Cow position:
               
chr15:20351828-20352359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 123
               

               
Conread position:
               
90-612
               

               
Cow position:
               
chr15:52611299-52611850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 147
               

               
Conread position:
               
90-614
               

               
Cow position:
               
chr15:5727651-5728151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 13
               

               
Conread position:
               
90-614
               

               
Cow position:
               
chr15:21389168-21388651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 55
               

               
Conread position:
               
91-224
               

               
Cow position:
               
chr15:38845898-38846030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
91-348
               

               
Cow position:
               
chr15:53045880-53045627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
189, 39
               

               
Conread position:
               
91-611
               

               
Cow position:
               
chr15:23568130-23567606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 125
               

               
Conread position:
               
92-247
               

               
Cow position:
               
chr15:36618100-36618253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr15:37205046-37205285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
187, 124
               

               
Conread position:
               
92-368
               

               
Cow position:
               
chr15:21900331-21900055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
186, 80
               

               
Conread position:
               
92-443
               

               
Cow position:
               
chr15:23768259-23767915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 122
               

               
Conread position:
               
92-454
               

               
Cow position:
               
chr15:24298240-24297872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
92-475
               

               
Cow position:
               
chr15:26192077-26191690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
140, 79
               

               
Conread position:
               
92-498
               

               
Cow position:
               
chr15:48404143-48403742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
193, 105
               

               
Conread position:
               
92-517
               

               
Cow position:
               
chr15:28150247-28150672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
92-557
               

               
Cow position:
               
chr15:41323454-41323920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 80
               

               
Conread position:
               
92-567
               

               
Cow position:
               
chr15:32648112-32647639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
166, 97
               

               
Conread position:
               
92-567
               

               
Cow position:
               
chr15:32674924-32675397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
166, 97
               

               
Conread position:
               
92-611
               

               
Cow position:
               
chr15:4926112-4925595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 77
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr15:4643175-4642648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr15:7579135-7578607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 62
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr15:7842298-7841769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr15:20414550-20414022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
92-614
               

               
Cow position:
               
chr15:21913133-21913666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
94-614
               

               
Cow position:
               
chr15:53183575-53183065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 103
               

               
Conread position:
               
95-398
               

               
Cow position:
               
chr15:31599335-31599638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
95-439
               

               
Cow position:
               
chr15:15215018-15215366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
95-450
               

               
Cow position:
               
chr15:19280090-19279741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
95-451
               

               
Cow position:
               
chr15:3572698-3572346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
181, 24
               

               
Conread position:
               
95-601
               

               
Cow position:
               
chr15:22713827-22713330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
96-290
               

               
Cow position:
               
chr15:10660553-10660357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
96-352
               

               
Cow position:
               
chr15:12655914-12655656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
119, 101
               

               
Conread position:
               
96-436
               

               
Cow position:
               
chr15:29604698-29604374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 110
               

               
Conread position:
               
96-502
               

               
Cow position:
               
chr15:27247509-27247917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 23
               

               
Conread position:
               
99-572
               

               
Cow position:
               
chr15:27732417-27732877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
100-259
               

               
Cow position:
               
chr15:4461041-4460884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
101-242
               

               
Cow position:
               
chr15:46585554-46585413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
101-503
               

               
Cow position:
               
chr15:13515373-13515779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 198
               

               
Conread position:
               
101-576
               

               
Cow position:
               
chr15:47280132-47279672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 115
               

               
Conread position:
               
101-614
               

               
Cow position:
               
chr15:15880933-15881441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 132
               

               
Conread position:
               
106-570
               

               
Cow position:
               
chr15:7962089-7962560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 124
               

               
Conread position:
               
109-614
               

               
Cow position:
               
chr15:5535774-5536274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
114-450
               

               
Cow position:
               
chr15:41620170-41619827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 29
               

               
Conread position:
               
115-610
               

               
Cow position:
               
chr15:2929165-2928692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr15:12884710-12884488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
165, 100
               

               
Conread position:
               
116-446
               

               
Cow position:
               
chr15:31181380-31181045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
165, 56
               

               
Conread position:
               
116-573
               

               
Cow position:
               
chr15:49685258-49685716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
116-610
               

               
Cow position:
               
chr15:42534782-42534282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 56
               

               
Conread position:
               
117-341
               

               
Cow position:
               
chr15:17859203-17858993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
117-612
               

               
Cow position:
               
chr15:20753232-20752737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
118-614
               

               
Cow position:
               
chr15:6538876-6538382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 89
               

               
Conread position:
               
120-425
               

               
Cow position:
               
chr15:5632706-5633004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 96
               

               
Conread position:
               
121-510
               

               
Cow position:
               
chr15:27280898-27281279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 79
               

               
Conread position:
               
124-365
               

               
Cow position:
               
chr15:9000981-9001228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
128-369
               

               
Cow position:
               
chr15:38877270-38877030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
152, 123
               

               
Conread position:
               
129-322
               

               
Cow position:
               
chr15:11268741-11268933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
149, 177
               

               
Conread position:
               
129-538
               

               
Cow position:
               
chr15:693869-693462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
151, 88
               

               
Conread position:
               
131-347
               

               
Cow position:
               
chr15:16904667-16904878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
150, 81
               

               
Conread position:
               
134-611
               

               
Cow position:
               
chr15:18206472-18206001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 29
               

               
Conread position:
               
134-611
               

               
Cow position:
               
chr15:19119572-19119099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 214
               

               
Conread position:
               
134-612
               

               
Cow position:
               
chr15:37716890-37716420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
136-391
               

               
Cow position:
               
chr15:25306587-25306843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
144, 79
               

               
Conread position:
               
140-393
               

               
Cow position:
               
chr15:11646446-11646189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
74, 161
               

               
Conread position:
               
144-593
               

               
Cow position:
               
chr15:6331989-6331562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 76
               

               
Conread position:
               
146-356
               

               
Cow position:
               
chr15:43750547-43750774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
146-451
               

               
Cow position:
               
chr15:14856415-14856126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 64
               

               
Conread position:
               
149-512
               

               
Cow position:
               
chr15:52380343-52380709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 185
               

               
Conread position:
               
150-445
               

               
Cow position:
               
chr15:2210630-2210918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
150-450
               

               
Cow position:
               
chr15:40009598-40009293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 156
               

               
Conread position:
               
150-570
               

               
Cow position:
               
chr15:43248719-43248275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
154-342
               

               
Cow position:
               
chr15:6083108-6082912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 183
               

               
Conread position:
               
155-489
               

               
Cow position:
               
chr15:52740065-52739728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
156-325
               

               
Cow position:
               
chr15:36725116-36724951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
156-347
               

               
Cow position:
               
chr15:12441763-12441574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
149, 59
               

               
Conread position:
               
156-512
               

               
Cow position:
               
chr15:46610994-46611337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
156-614
               

               
Cow position:
               
chr15:22751514-22751980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
157-422
               

               
Cow position:
               
chr15:47105104-47105365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
181, 118
               

               
Conread position:
               
157-614
               

               
Cow position:
               
chr15:44256540-44256985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
159-472
               

               
Cow position:
               
chr15:10615668-10615363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
240, 11
               

               
Conread position:
               
159-599
               

               
Cow position:
               
chr15:39851-40284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 51
               

               
Conread position:
               
160-462
               

               
Cow position:
               
chr15:20725550-20725248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr15:28126980-28126660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
160-557
               

               
Cow position:
               
chr15:16936782-16936403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 117
               

               
Conread position:
               
160-612
               

               
Cow position:
               
chr15:15708048-15707600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
161-612
               

               
Cow position:
               
chr15:23702846-23703285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 55
               

               
Conread position:
               
163-378
               

               
Cow position:
               
chr15:4350534-4350315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 94
               

               
Conread position:
               
164-407
               

               
Cow position:
               
chr15:10845789-10846036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
115, 52
               

               
Conread position:
               
165-614
               

               
Cow position:
               
chr15:13684197-13683767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
166-301
               

               
Cow position:
               
chr15:29861394-29861530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
169-267
               

               
Cow position:
               
chr15:17813246-17813344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
169-347
               

               
Cow position:
               
chr15:51374082-51374259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
169-477
               

               
Cow position:
               
chr15:6046241-6045931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
170-302
               

               
Cow position:
               
chr15:31467137-31467264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 44
               

               
Conread position:
               
170-347
               

               
Cow position:
               
chr15:23927398-23927219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
170-364
               

               
Cow position:
               
chr15:2522909-2523104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
170-380
               

               
Cow position:
               
chr15:34145078-34144868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
111, 35
               

               
Conread position:
               
170-503
               

               
Cow position:
               
chr15:53680684-53680361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
170-586
               

               
Cow position:
               
chr15:32204823-32204421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr15:51632958-51632526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 20
               

               
Conread position:
               
174-438
               

               
Cow position:
               
chr15:13846515-13846232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
177-430
               

               
Cow position:
               
chr15:21522869-21523127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
177-488
               

               
Cow position:
               
chr15:11363095-11362782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
177-610
               

               
Cow position:
               
chr15:36422741-36423163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
177-614
               

               
Cow position:
               
chr15:7750054-7749619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
179-479
               

               
Cow position:
               
chr15:53402906-53402616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
178, 37
               

               
Conread position:
               
184-449
               

               
Cow position:
               
chr15:12316016-12316280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
184-607
               

               
Cow position:
               
chr15:14322968-14322528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
193-551
               

               
Cow position:
               
chr15:31855420-31855069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 5
               

               
Conread position:
               
193-614
               

               
Cow position:
               
chr15:6806572-6806151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
194-542
               

               
Cow position:
               
chr15:27281899-27282238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
89, 102
               

               
Conread position:
               
200-612
               

               
Cow position:
               
chr15:41583015-41583434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
206-443
               

               
Cow position:
               
chr15:50059460-50059212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
209-570
               

               
Cow position:
               
chr15:29272301-29272670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
212-450
               

               
Cow position:
               
chr15:23332761-23332529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
6, 47
               

               
Conread position:
               
212-570
               

               
Cow position:
               
chr15:16741920-16741559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
215-497
               

               
Cow position:
               
chr15:7827919-7827632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 148
               

               
Conread position:
               
217-412
               

               
Cow position:
               
chr15:15025528-15025723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
219-348
               

               
Cow position:
               
chr15:36346882-36347017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
219-614
               

               
Cow position:
               
chr15:9072307-9071900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
229-473
               

               
Cow position:
               
chr15:51831465-51831211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
231-614
               

               
Cow position:
               
chr15:1128129-1128503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
232-558
               

               
Cow position:
               
chr15:9062460-9062111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
234-503
               

               
Cow position:
               
chr15:19733499-19733772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
235-471
               

               
Cow position:
               
chr15:1701823-1702067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
46, 168
               

               
Conread position:
               
244-422
               

               
Cow position:
               
chr15:52683317-52683498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
254-597
               

               
Cow position:
               
chr15:12837163-12836826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
256-451
               

               
Cow position:
               
chr15:241001-241206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
262-601
               

               
Cow position:
               
chr15:9393150-9392812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 183
               

               
Conread position:
               
262-613
               

               
Cow position:
               
chr15:18580704-18580346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 161
               

               
Conread position:
               
262-614
               

               
Cow position:
               
chr15:6549806-6550166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 320
               

               
Conread position:
               
265-614
               

               
Cow position:
               
chr15:24822210-24821857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
265-614
               

               
Cow position:
               
chr15:31085704-31086077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
266-498
               

               
Cow position:
               
chr15:34284191-34283945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
266-540
               

               
Cow position:
               
chr15:18284406-18284689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 156
               

               
Conread position:
               
268-609
               

               
Cow position:
               
chr15:13669731-13669389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
278-588
               

               
Cow position:
               
chr15:53129986-53130301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
279-601
               

               
Cow position:
               
chr15:36618358-36618711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
280-611
               

               
Cow position:
               
chr15:29542175-29542514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 143
               

               
Conread position:
               
284-426
               

               
Cow position:
               
chr15:36787490-36787641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
287-614
               

               
Cow position:
               
chr15:12259526-12259841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
290-537
               

               
Cow position:
               
chr15:10450711-10450452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
298-571
               

               
Cow position:
               
chr15:53481650-53481919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
65, 95
               

               
Conread position:
               
299-519
               

               
Cow position:
               
chr15:45919586-45919811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
300-590
               

               
Cow position:
               
chr15:12359449-12359751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
308-441
               

               
Cow position:
               
chr15:38935911-38936046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 108
               
Show alignments to all cow chromosomes.