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Cow genome map

           
Conread name:
           
rpliv0131_d19.y1
        

               
Conread position:
               
1-93
               

               
Cow position:
               
chr16:11634856-11634764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr16:7270350-7270476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr16:41653157-41653026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 73
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr16:8083742-8083882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 44
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr16:26842935-26842793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr16:30054915-30055055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr16:51393202-51393345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr16:42992404-42992261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr16:46184346-46184195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr16:18669146-18668993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr16:49252381-49252525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr16:17617175-17617334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr16:23089026-23088874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr16:33073700-33073852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
89, 46
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr16:19282192-19282033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr16:29060569-29060405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr16:11654229-11654068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr16:30646694-30646538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr16:4277367-4277530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:4615245-4615080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:11775812-11775971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:18429773-18429610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:24672675-24672840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:33717241-33717076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:50569445-50569286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:52325411-52325576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:55961140-55961305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr16:27326937-27327105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:9986871-9987048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:28233120-28233285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr16:6802497-6802672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr16:8809912-8810077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr16:25419066-25419237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr16:33302370-33302201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr16:21044484-21044310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr16:9242393-9242214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:4102657-4102819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:8288766-8288935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 107
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:11019328-11019504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 124
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:29311713-29311535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr16:38581190-38581013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr16:45278723-45278547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
78, 83
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr16:24674487-24674669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr16:28980017-28979841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr16:44144576-44144397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr16:13796452-13796274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr16:15949323-15949500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr16:38355247-38355422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr16:10011663-10011845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 153
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr16:12507074-12507258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr16:22776234-22776418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr16:51531225-51531410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 5
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr16:56912502-56912681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr16:17474941-17474768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr16:28199213-28199032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr16:4507876-4507698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr16:43758461-43758644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr16:10033050-10032867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
89, 151
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr16:11653315-11653138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr16:13053733-13053548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr16:39029908-39030099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr16:4321767-4321590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr16:9097211-9097022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
89, 187
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr16:10249631-10249821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr16:14210597-14210774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr16:15714297-15714107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr16:30211634-30211452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr16:24202676-24202869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 159
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr16:27051233-27051041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr16:30908764-30908952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr16:9836596-9836782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
137, 65
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr16:31484481-31484673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr16:35074750-35074551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 122
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr16:18572870-18573066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr16:56615317-56615518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr16:14376966-14376769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr16:5382371-5382163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr16:56821793-56821584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr16:50286698-50286496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 42
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr16:11003377-11003583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr16:51143984-51143785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
77, 163
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr16:9596552-9596351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr16:48448926-48448704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr16:35297587-35297385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr16:7496434-7496235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr16:15905059-15905273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr16:38251180-38250982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr16:55965371-55965158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr16:45047033-45046810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 156
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr16:11390089-11390313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr16:18243922-18243715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 115
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:7812878-7812663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 210
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:32142277-32142062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:34223637-34223423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 128
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:53408762-53408958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:18953767-18953555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 69
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:20824662-20824448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:31241107-31241319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr16:8205897-8206104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr16:22323625-22323848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr16:49860419-49860202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr16:52357351-52357569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr16:56595202-56595417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
86, 169
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:9560300-9560526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:9730019-9730237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:9959014-9958799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 173
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr16:11584222-11584440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr16:12379157-12379391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
80, 217
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr16:20648092-20647879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr16:258098-258323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 116
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr16:11916022-11916257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 69
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr16:48567713-48567492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr16:9578308-9578542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr16:14733238-14733480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 227
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr16:34291115-34291342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:8953489-8953750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
68, 135
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:51610640-51610892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:51795419-51795656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
87, 120
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr16:20664297-20664066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
20, 139
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr16:10020727-10020478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr16:12077296-12077538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr16:38244433-38244684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 224
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr16:42977659-42977402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr16:46548077-46548337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr16:42432932-42433177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
216, 59
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr16:32869679-32869433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr16:26030691-26030955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
83, 219
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr16:11134800-11135054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:8018142-8017890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
157, 50
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:30305632-30305892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:56670725-56670998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
56, 222
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr16:44429062-44428797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr16:36286502-36286768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:21002187-21002478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr16:44138305-44138593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 149
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr16:39778084-39777810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr16:35067484-35067199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr16:44394472-44394168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr16:45700295-45700576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
86, 219
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr16:47835104-47834836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
148, 77
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr16:889191-889453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr16:28880117-28879844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:30186829-30186539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr16:19052818-19052528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr16:13696494-13696787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
86, 191
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr16:47852413-47852708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 57
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr16:5907544-5907233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr16:44654098-44654390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
86, 146
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr16:34753768-34754078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
68, 223
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr16:43125763-43126064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
74, 161
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr16:12108186-12108505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 233
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr16:16565294-16565005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr16:50409433-50409111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 114
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr16:4851930-4852237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 115
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr16:11083181-11082885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 114
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:30662086-30662386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr16:12324639-12324335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr16:7583583-7583265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 72
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr16:40446453-40446120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 154
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr16:39682914-39683241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 80
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr16:56796469-56796801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 228
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr16:36120811-36121117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 69
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr16:9905281-9904955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 213
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr16:11660285-11660583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
279, 56
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr16:54225332-54225645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 177
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr16:9600601-9600290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr16:22984935-22984615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr16:27723396-27723068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
227, 69
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr16:54709868-54710180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
279, 58
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr16:42398704-42399051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 226
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr16:20614681-20614327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr16:12320408-12320065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr16:38243475-38243819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr16:10504999-10504678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
279, 14
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr16:42201090-42200729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:7441915-7442273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 102
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:20205649-20205285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 214
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:31348577-31348938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr16:591619-591989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 217
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr16:31078918-31079272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
225, 14
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr16:3047157-3047525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr16:4275557-4275925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr16:6344273-6344628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
223, 51
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr16:40514308-40514678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
272, 59
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr16:13707843-13707449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 236
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr16:52274950-52275328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 68
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr16:34153384-34153777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr16:11957393-11957790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 69
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr16:9615030-9615444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 150
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr16:14125306-14124947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
214, 46
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr16:8065700-8066091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 219
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr16:8068631-8069030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr16:7582901-7582497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 5
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr16:51697260-51696880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr16:56126593-56126996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 269
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr16:48581112-48580708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
86, 166
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr16:42444345-42443935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 221
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr16:22773158-22772744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 57
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr16:49336405-49336000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr16:32781557-32781133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 155
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr16:29038102-29037680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 153
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr16:8193641-8193211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr16:25839796-25839380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr16:51247130-51246725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 142
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr16:56082177-56082599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 219
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr16:50282250-50282680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr16:14568306-14568734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 214
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr16:8522206-8522638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr16:11008513-11008093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 38
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr16:38905039-38905477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 226
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr16:26372778-26373205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr16:22850513-22850073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 167
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr16:45813513-45813949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 69
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr16:35195426-35195868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 209
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr16:14242553-14242116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr16:16597744-16597303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 207
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr16:54664614-54665070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr16:8493804-8494254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr16:22841862-22842316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr16:23681546-23681109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr16:48145221-48145662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 81
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr16:17746029-17745570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr16:19670173-19670595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 70
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr16:8958873-8959331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr16:10039659-10040106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 134
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr16:2751159-2750725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr16:14106829-14106365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 219
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr16:43308380-43308843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr16:46655467-46655000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr16:12906628-12907104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr16:29766505-29766053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr16:13611253-13611772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 221
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr16:6343721-6344231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 118
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr16:23472927-23472414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr16:15761966-15762496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 233
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr16:33646200-33645686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr16:11774865-11775384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr16:53428439-53427914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 63
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr16:14754143-14754688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 70
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr16:52834716-52835246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 61
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr16:38708651-38709198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 172
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr16:8841082-8840509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 209
               

               
Conread position:
               
1-569
               

               
Cow position:
               
chr16:23822844-23823398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chr16:7665825-7665225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 229
               

               
Conread position:
               
1-588
               

               
Cow position:
               
chr16:49229589-49230176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
1-592
               

               
Cow position:
               
chr16:9497075-9497679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 219
               

               
Conread position:
               
1-599
               

               
Cow position:
               
chr16:7076105-7075491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 162
               

               
Conread position:
               
1-601
               

               
Cow position:
               
chr16:56231997-56231403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 50
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr16:15726167-15726788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr16:19644071-19643468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 39
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr16:45731220-45731797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr16:54288052-54287448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 149
               

               
Conread position:
               
1-610
               

               
Cow position:
               
chr16:6262664-6263282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 336
               

               
Conread position:
               
1-611
               

               
Cow position:
               
chr16:18757650-18758268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 8
               

               
Conread position:
               
1-611
               

               
Cow position:
               
chr16:48398072-48398672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 89
               

               
Conread position:
               
1-611
               

               
Cow position:
               
chr16:53813464-53814085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr16:238451-237816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr16:7011257-7010640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 202
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr16:13990151-13989556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 82
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr16:15824256-15824864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr16:32969897-32970500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr16:40333150-40333751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 81
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr16:46552978-46552377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr16:52170238-52169649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr16:8025684-8026273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 51
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:4910337-4910964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 456
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:4971836-4972457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 222
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:5415560-5416190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 162
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:5725647-5725048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:13698703-13698072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:15370868-15370253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 67
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:16368549-16369160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:17143123-17142499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 220
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:17665840-17665209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:18206140-18205529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 71
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:19756594-19757219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:24128892-24128270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 150
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:26676504-26677123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:29159298-29158700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 19
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:29655499-29654890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 69
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:31559089-31558462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 134
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:33704987-33704374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 51
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:34998437-34999036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 152
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:42340362-42339770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 19
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:43276215-43275585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:47243147-47242523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 61
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:49125336-49125951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:50906663-50906034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 229
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:51043831-51043201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 39
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:51501113-51500502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:51598428-51599034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:51709964-51710552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 55
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr16:53267889-53267287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 38
               

               
Conread position:
               
2-114
               

               
Cow position:
               
chr16:30368641-30368756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
2-146
               

               
Cow position:
               
chr16:53004009-53004157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr16:16543036-16542886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
2-166
               

               
Cow position:
               
chr16:12251208-12251038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 144
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr16:12976654-12976485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr16:12091840-12091670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr16:37299978-37299806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
2-171
               

               
Cow position:
               
chr16:17180343-17180172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr16:9018060-9017885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 131
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr16:9513476-9513297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr16:42253221-42253394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr16:40029701-40029885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr16:9279920-9280129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr16:33632494-33632688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr16:4429390-4429607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 206
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:17283624-17283417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr16:50442736-50442514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr16:13295787-13295559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 197
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr16:37401423-37401209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
135, 56
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr16:589543-589768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr16:31561938-31561691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:21381388-21381647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:50931349-50931602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr16:48917659-48917366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr16:20872195-20871915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 13
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr16:16571084-16570787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
270, 68
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr16:12543175-12542854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr16:33595764-33596067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 49
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr16:45348574-45348254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 208
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr16:12274254-12273911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr16:29712600-29712263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 82
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr16:50078573-50078907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 78
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr16:34256851-34257211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 201
               

               
Conread position:
               
2-368
               

               
Cow position:
               
chr16:14762126-14762492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
73, 178
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr16:24855718-24855356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
278, 80
               

               
Conread position:
               
2-373
               

               
Cow position:
               
chr16:46433140-46433514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 301
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr16:14685207-14685587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr16:6016200-6016601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr16:41530124-41530500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 16
               

               
Conread position:
               
2-402
               

               
Cow position:
               
chr16:13712758-13713134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 13
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr16:28395907-28396317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 14
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr16:32301818-32302211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 221
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr16:45047471-45047862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 61
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr16:10148451-10148041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 65
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr16:42733837-42734303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 13
               

               
Conread position:
               
2-500
               

               
Cow position:
               
chr16:1548697-1549192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 79
               

               
Conread position:
               
2-573
               

               
Cow position:
               
chr16:5096117-5095591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 93
               

               
Conread position:
               
2-601
               

               
Cow position:
               
chr16:13306687-13307284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
2-610
               

               
Cow position:
               
chr16:23564322-23563714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 178
               

               
Conread position:
               
2-612
               

               
Cow position:
               
chr16:25170577-25169965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 210
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr16:2223210-2223836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 458
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr16:8621428-8620820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 101
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr16:9933344-9932732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 147
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr16:39165417-39164831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 50
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr16:48425175-48424574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 180
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr16:49126006-49126615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr16:11467786-11467641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr16:30580936-30581078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr16:42107812-42107670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
3-161
               

               
Cow position:
               
chr16:12492929-12493092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-161
               

               
Cow position:
               
chr16:48455855-48455702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr16:21442425-21442593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 108
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr16:22972587-22972756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 159
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr16:33290570-33290398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr16:16545624-16545445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr16:19076972-19077155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr16:12057235-12057049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 118
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr16:10122315-10122509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr16:8090346-8090542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr16:53720156-53720353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr16:31893721-31893908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr16:12220869-12220666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr16:31573429-31573238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 91
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr16:24895473-24895264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr16:31575330-31575119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr16:16232242-16232027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr16:11928958-11929169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 202
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr16:15407373-15407584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 151
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr16:11359330-11359123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr16:18047969-18048183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr16:31149558-31149349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr16:32893802-32893599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr16:15945069-15945286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr16:22318768-22318981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 119
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr16:45943583-45943804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr16:50395556-50395325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr16:29815156-29814931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 120
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr16:30936046-30935817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr16:9830631-9830391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr16:28444304-28444545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 225
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr16:12687934-12688167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
89, 49
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr16:11094640-11094889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr16:8242744-8242993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
193, 70
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr16:47274541-47274813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
84, 231
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr16:31565558-31565823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
82, 204
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:56665749-56665488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
220, 17
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr16:39516413-39516698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
67, 145
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:50943570-50943287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr16:54226431-54226715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
3-309
               

               
Cow position:
               
chr16:27020252-27019950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
278, 212
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr16:42539399-42539716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr16:8738250-8737936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 77
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr16:33198250-33198592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr16:424626-425012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
67, 105
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr16:15504349-15504755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 75
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr16:39695297-39695711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 229
               

               
Conread position:
               
3-419
               

               
Cow position:
               
chr16:4192248-4192656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr16:4135042-4134627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
3-439
               

               
Cow position:
               
chr16:47519015-47518593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
3-462
               

               
Cow position:
               
chr16:29380440-29379974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 234
               

               
Conread position:
               
3-473
               

               
Cow position:
               
chr16:56850531-56850031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
87, 209
               

               
Conread position:
               
3-477
               

               
Cow position:
               
chr16:3633460-3632997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
3-521
               

               
Cow position:
               
chr16:53553533-53554050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 216
               

               
Conread position:
               
3-526
               

               
Cow position:
               
chr16:38663525-38664052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
3-537
               

               
Cow position:
               
chr16:35758384-35757862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
3-541
               

               
Cow position:
               
chr16:32587391-32586843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 205
               

               
Conread position:
               
3-596
               

               
Cow position:
               
chr16:3289194-3288619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 218
               

               
Conread position:
               
3-607
               

               
Cow position:
               
chr16:30290494-30289890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 220
               

               
Conread position:
               
3-610
               

               
Cow position:
               
chr16:54579348-54578746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 89
               

               
Conread position:
               
3-612
               

               
Cow position:
               
chr16:7136163-7136777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 296
               

               
Conread position:
               
3-614
               

               
Cow position:
               
chr16:2396504-2395904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 225
               

               
Conread position:
               
3-614
               

               
Cow position:
               
chr16:7542469-7541866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 57
               

               
Conread position:
               
3-614
               

               
Cow position:
               
chr16:42078665-42079270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 69
               

               
Conread position:
               
4-167
               

               
Cow position:
               
chr16:11364875-11365043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr16:15203175-15203363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr16:32512121-32512302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr16:10171723-10171528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr16:34728925-34728712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr16:18255999-18256215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr16:40454727-40454512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr16:30369532-30369221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
84, 221
               

               
Conread position:
               
4-383
               

               
Cow position:
               
chr16:16875864-16875491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 173
               

               
Conread position:
               
4-433
               

               
Cow position:
               
chr16:9729380-9728953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 230
               

               
Conread position:
               
4-465
               

               
Cow position:
               
chr16:3614919-3614465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
4-465
               

               
Cow position:
               
chr16:47820756-47820288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 155
               

               
Conread position:
               
4-475
               

               
Cow position:
               
chr16:14361278-14360814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 88
               

               
Conread position:
               
4-614
               

               
Cow position:
               
chr16:5654683-5654084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 163
               

               
Conread position:
               
5-159
               

               
Cow position:
               
chr16:27759419-27759581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr16:34687417-34687582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr16:14343763-14343596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr16:12819180-12819002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr16:37557713-37557890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr16:39385670-39385497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 102
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr16:9602988-9602809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 108
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr16:8919034-8918853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 179
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr16:5360086-5360269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr16:42038246-42038053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr16:55626948-55626761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr16:26843907-26843714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 152
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr16:55613320-55613516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr16:13252138-13252325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr16:12342418-12342205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr16:42864554-42864769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr16:47180984-47181196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 132
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr16:32536821-32536603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 108
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr16:33238515-33238747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr16:12523239-12522986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr16:35741060-35740796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr16:40377631-40377894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 225
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr16:15981210-15981479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr16:2417405-2417695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 206
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr16:23739848-23740145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
5-303
               

               
Cow position:
               
chr16:56173400-56173687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
80, 209
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr16:19047252-19047564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr16:28655475-28655804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr16:3821711-3821374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr16:6887267-6887608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 223
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr16:47302060-47301721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
87, 136
               

               
Conread position:
               
5-351
               

               
Cow position:
               
chr16:8231183-8231520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 107
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr16:44147248-44147599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 231
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr16:13461297-13461640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 118
               

               
Conread position:
               
5-369
               

               
Cow position:
               
chr16:38191658-38191290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 206
               

               
Conread position:
               
5-407
               

               
Cow position:
               
chr16:26702737-26703140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
5-427
               

               
Cow position:
               
chr16:29557443-29557876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
5-431
               

               
Cow position:
               
chr16:33588842-33588419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr16:44210378-44210809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 321
               

               
Conread position:
               
5-469
               

               
Cow position:
               
chr16:38903274-38903721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 184
               

               
Conread position:
               
5-470
               

               
Cow position:
               
chr16:46522072-46521616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
5-552
               

               
Cow position:
               
chr16:33299578-33299024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 201
               

               
Conread position:
               
5-557
               

               
Cow position:
               
chr16:21451031-21450475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 223
               

               
Conread position:
               
5-585
               

               
Cow position:
               
chr16:18718769-18719325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 117
               

               
Conread position:
               
5-598
               

               
Cow position:
               
chr16:26610823-26610214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 202
               

               
Conread position:
               
5-607
               

               
Cow position:
               
chr16:45139845-45139243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
5-612
               

               
Cow position:
               
chr16:16402138-16402764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 153
               

               
Conread position:
               
5-614
               

               
Cow position:
               
chr16:42241942-42242561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 51
               

               
Conread position:
               
5-614
               

               
Cow position:
               
chr16:42969740-42970363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 272
               

               
Conread position:
               
5-614
               

               
Cow position:
               
chr16:46752089-46752711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
6-186
               

               
Cow position:
               
chr16:43866666-43866856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
6-196
               

               
Cow position:
               
chr16:34993399-34993594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr16:50678090-50678300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr16:23718794-23719040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
84, 212
               

               
Conread position:
               
6-369
               

               
Cow position:
               
chr16:7977164-7976805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 142
               

               
Conread position:
               
6-440
               

               
Cow position:
               
chr16:47245767-47245330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
6-465
               

               
Cow position:
               
chr16:34168768-34168312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 214
               

               
Conread position:
               
6-614
               

               
Cow position:
               
chr16:23058253-23058846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
7-187
               

               
Cow position:
               
chr16:7928203-7928388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
7-216
               

               
Cow position:
               
chr16:30174342-30174560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 176
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr16:45109029-45108791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 221
               

               
Conread position:
               
7-247
               

               
Cow position:
               
chr16:8673429-8673683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr16:54734428-54734080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
50, 114
               

               
Conread position:
               
7-387
               

               
Cow position:
               
chr16:16552745-16552358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 202
               

               
Conread position:
               
8-182
               

               
Cow position:
               
chr16:53451882-53451707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
8-188
               

               
Cow position:
               
chr16:23811301-23811120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
8-264
               

               
Cow position:
               
chr16:1220000-1220261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
8-410
               

               
Cow position:
               
chr16:50289329-50288929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
8-614
               

               
Cow position:
               
chr16:820429-819830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr16:14386768-14386567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
9-212
               

               
Cow position:
               
chr16:11389393-11389602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
9-218
               

               
Cow position:
               
chr16:9447692-9447485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
78, 122
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr16:46807361-46807640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr16:38020288-38019999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 225
               

               
Conread position:
               
9-340
               

               
Cow position:
               
chr16:31269320-31268986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 242
               

               
Conread position:
               
9-347
               

               
Cow position:
               
chr16:30910796-30910457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
78, 119
               

               
Conread position:
               
9-432
               

               
Cow position:
               
chr16:56522296-56522722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 128
               

               
Conread position:
               
9-470
               

               
Cow position:
               
chr16:13578678-13579131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 214
               

               
Conread position:
               
9-549
               

               
Cow position:
               
chr16:44743953-44744516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 221
               

               
Conread position:
               
10-166
               

               
Cow position:
               
chr16:32068999-32069157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
10-177
               

               
Cow position:
               
chr16:8469856-8469684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr16:50841419-50841209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
10-455
               

               
Cow position:
               
chr16:56845725-56846171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 199
               

               
Conread position:
               
11-203
               

               
Cow position:
               
chr16:13996018-13996214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 175
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr16:33267896-33267584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 176
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr16:48360290-48360632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
66, 195
               

               
Conread position:
               
11-614
               

               
Cow position:
               
chr16:7151995-7152587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 56
               

               
Conread position:
               
12-206
               

               
Cow position:
               
chr16:29026390-29026186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr16:12467793-12468074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 183
               

               
Conread position:
               
12-315
               

               
Cow position:
               
chr16:23955654-23955956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 208
               

               
Conread position:
               
12-352
               

               
Cow position:
               
chr16:23366401-23366075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
13-441
               

               
Cow position:
               
chr16:27659588-27659985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
146, 39
               

               
Conread position:
               
14-450
               

               
Cow position:
               
chr16:7619002-7619464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 143
               

               
Conread position:
               
17-128
               

               
Cow position:
               
chr16:24202986-24203102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
17-213
               

               
Cow position:
               
chr16:25484491-25484310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
17-229
               

               
Cow position:
               
chr16:15023460-15023675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
17-258
               

               
Cow position:
               
chr16:9161245-9161006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
203, 63
               

               
Conread position:
               
17-270
               

               
Cow position:
               
chr16:32426553-32426805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 180
               

               
Conread position:
               
17-304
               

               
Cow position:
               
chr16:33405320-33405605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
48, 239
               

               
Conread position:
               
17-463
               

               
Cow position:
               
chr16:15960110-15960575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 293
               

               
Conread position:
               
17-466
               

               
Cow position:
               
chr16:3246037-3246476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
17-614
               

               
Cow position:
               
chr16:7456287-7456888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 136
               

               
Conread position:
               
17-614
               

               
Cow position:
               
chr16:51112712-51113303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
18-181
               

               
Cow position:
               
chr16:38743191-38743031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
18-198
               

               
Cow position:
               
chr16:9932661-9932483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 154
               

               
Conread position:
               
18-356
               

               
Cow position:
               
chr16:5975261-5974903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 217
               

               
Conread position:
               
18-401
               

               
Cow position:
               
chr16:8322822-8323205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 35
               

               
Conread position:
               
18-451
               

               
Cow position:
               
chr16:7429544-7429109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 66
               

               
Conread position:
               
18-471
               

               
Cow position:
               
chr16:43505661-43506089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 34
               

               
Conread position:
               
19-386
               

               
Cow position:
               
chr16:17981981-17982348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 49
               

               
Conread position:
               
20-204
               

               
Cow position:
               
chr16:43185465-43185277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
20-205
               

               
Cow position:
               
chr16:8711020-8711217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
20-396
               

               
Cow position:
               
chr16:10592609-10592226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
20-437
               

               
Cow position:
               
chr16:11615077-11615483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
20-445
               

               
Cow position:
               
chr16:48385247-48385664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 51
               

               
Conread position:
               
20-450
               

               
Cow position:
               
chr16:47662897-47662445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 150
               

               
Conread position:
               
20-614
               

               
Cow position:
               
chr16:49217395-49217992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 146
               

               
Conread position:
               
20-614
               

               
Cow position:
               
chr16:53508822-53509420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 27
               

               
Conread position:
               
21-207
               

               
Cow position:
               
chr16:10523800-10523609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
21-212
               

               
Cow position:
               
chr16:2819557-2819759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
21-212
               

               
Cow position:
               
chr16:38606902-38607097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
21-212
               

               
Cow position:
               
chr16:45460871-45461067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
21-218
               

               
Cow position:
               
chr16:27534263-27534062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
64, 142
               

               
Conread position:
               
21-324
               

               
Cow position:
               
chr16:22334998-22335285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
265, 35
               

               
Conread position:
               
21-434
               

               
Cow position:
               
chr16:37452451-37452868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
21-476
               

               
Cow position:
               
chr16:23483449-23482994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 199
               

               
Conread position:
               
21-612
               

               
Cow position:
               
chr16:31978018-31978618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 200
               

               
Conread position:
               
21-614
               

               
Cow position:
               
chr16:54298636-54298049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 182
               

               
Conread position:
               
23-187
               

               
Cow position:
               
chr16:19053719-19053886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
23-225
               

               
Cow position:
               
chr16:22738440-22738240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
67, 160
               

               
Conread position:
               
23-246
               

               
Cow position:
               
chr16:55944983-55945203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
23-271
               

               
Cow position:
               
chr16:51241374-51241625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
62, 184
               

               
Conread position:
               
23-309
               

               
Cow position:
               
chr16:50453920-50453638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
23-328
               

               
Cow position:
               
chr16:56565760-56565453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
23-342
               

               
Cow position:
               
chr16:22380190-22380512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
23-416
               

               
Cow position:
               
chr16:5896583-5896185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
24-356
               

               
Cow position:
               
chr16:7418538-7418213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
24-613
               

               
Cow position:
               
chr16:49215843-49216388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
537, 70
               

               
Conread position:
               
25-165
               

               
Cow position:
               
chr16:22927683-22927541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
25-235
               

               
Cow position:
               
chr16:15953652-15953872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
25-247
               

               
Cow position:
               
chr16:22327680-22327438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
29, 215
               

               
Conread position:
               
25-614
               

               
Cow position:
               
chr16:45610149-45609554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 154
               

               
Conread position:
               
26-446
               

               
Cow position:
               
chr16:37117235-37116810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
28-614
               

               
Cow position:
               
chr16:675649-675070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
31-480
               

               
Cow position:
               
chr16:33482604-33482141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 170
               

               
Conread position:
               
31-614
               

               
Cow position:
               
chr16:42753000-42752442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
32-614
               

               
Cow position:
               
chr16:601102-600511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
34-164
               

               
Cow position:
               
chr16:12836074-12836209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
34-303
               

               
Cow position:
               
chr16:41841065-41840769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
34-328
               

               
Cow position:
               
chr16:8448500-8448787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 115
               

               
Conread position:
               
34-338
               

               
Cow position:
               
chr16:47964670-47964968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
246, 57
               

               
Conread position:
               
34-432
               

               
Cow position:
               
chr16:13969208-13969629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 198
               

               
Conread position:
               
34-589
               

               
Cow position:
               
chr16:7702676-7702122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
34-612
               

               
Cow position:
               
chr16:35188392-35187819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 49
               

               
Conread position:
               
35-601
               

               
Cow position:
               
chr16:52854873-52855441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 186
               

               
Conread position:
               
38-239
               

               
Cow position:
               
chr16:6213745-6213538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
41-301
               

               
Cow position:
               
chr16:21317455-21317712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
42-431
               

               
Cow position:
               
chr16:11806813-11806433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
44-614
               

               
Cow position:
               
chr16:28922918-28922359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 154
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr16:25154599-25154951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr16:52636246-52636621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
47-424
               

               
Cow position:
               
chr16:45785877-45785496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
47-524
               

               
Cow position:
               
chr16:56185304-56185799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
48-215
               

               
Cow position:
               
chr16:56563975-56564144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
48-594
               

               
Cow position:
               
chr16:49169240-49169791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 259
               

               
Conread position:
               
48-614
               

               
Cow position:
               
chr16:16264967-16265530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 67
               

               
Conread position:
               
49-215
               

               
Cow position:
               
chr16:24403290-24403460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
49-340
               

               
Cow position:
               
chr16:6319343-6319043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
49-380
               

               
Cow position:
               
chr16:17627069-17626732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 171
               

               
Conread position:
               
49-614
               

               
Cow position:
               
chr16:18353817-18354377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
49-614
               

               
Cow position:
               
chr16:56812828-56813399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
51-433
               

               
Cow position:
               
chr16:42633606-42633999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 134
               

               
Conread position:
               
51-614
               

               
Cow position:
               
chr16:18141191-18141756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
51-614
               

               
Cow position:
               
chr16:43800779-43801329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 147
               

               
Conread position:
               
52-175
               

               
Cow position:
               
chr16:54091257-54091386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
52-187
               

               
Cow position:
               
chr16:9950802-9950939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 119
               

               
Conread position:
               
52-226
               

               
Cow position:
               
chr16:17460300-17460125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
52-237
               

               
Cow position:
               
chr16:4938230-4938039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
52-263
               

               
Cow position:
               
chr16:9500655-9500439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
52-285
               

               
Cow position:
               
chr16:42176774-42176543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
163, 23
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:10945304-10945555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:53089223-53089463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
228, 19
               

               
Conread position:
               
52-412
               

               
Cow position:
               
chr16:48190876-48191232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
52-442
               

               
Cow position:
               
chr16:20025573-20025184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 93
               

               
Conread position:
               
52-446
               

               
Cow position:
               
chr16:53086203-53086588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
52-495
               

               
Cow position:
               
chr16:28833984-28833529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 237
               

               
Conread position:
               
52-581
               

               
Cow position:
               
chr16:25965630-25965110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 23
               

               
Conread position:
               
52-612
               

               
Cow position:
               
chr16:6378989-6379537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
52-613
               

               
Cow position:
               
chr16:5727065-5726498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
52-614
               

               
Cow position:
               
chr16:4059492-4058934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 147
               

               
Conread position:
               
52-614
               

               
Cow position:
               
chr16:11102698-11103276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 17
               

               
Conread position:
               
53-296
               

               
Cow position:
               
chr16:43675010-43674763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
53-301
               

               
Cow position:
               
chr16:18052468-18052214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
53-331
               

               
Cow position:
               
chr16:10773256-10772987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
53-349
               

               
Cow position:
               
chr16:35297214-35296909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 231
               

               
Conread position:
               
53-356
               

               
Cow position:
               
chr16:52133382-52133686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
53-562
               

               
Cow position:
               
chr16:24826203-24825687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 37
               

               
Conread position:
               
53-611
               

               
Cow position:
               
chr16:40562367-40561797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 246
               

               
Conread position:
               
54-330
               

               
Cow position:
               
chr16:54342121-54341843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 170
               

               
Conread position:
               
54-356
               

               
Cow position:
               
chr16:7550101-7549797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
55-214
               

               
Cow position:
               
chr16:44713346-44713510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
55-245
               

               
Cow position:
               
chr16:33530543-33530353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
37, 163
               

               
Conread position:
               
55-263
               

               
Cow position:
               
chr16:40700603-40700806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
55-392
               

               
Cow position:
               
chr16:53830458-53830799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr16:8933294-8933675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
55-444
               

               
Cow position:
               
chr16:35623117-35623512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
55-613
               

               
Cow position:
               
chr16:8438518-8439050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 160
               

               
Conread position:
               
56-224
               

               
Cow position:
               
chr16:22329294-22329120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
56-237
               

               
Cow position:
               
chr16:11477950-11478132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
148, 51
               

               
Conread position:
               
56-279
               

               
Cow position:
               
chr16:48545954-48545727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 159
               

               
Conread position:
               
57-212
               

               
Cow position:
               
chr16:6310569-6310729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
57-279
               

               
Cow position:
               
chr16:12501029-12501255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
57-407
               

               
Cow position:
               
chr16:12360844-12361197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
57-408
               

               
Cow position:
               
chr16:43105385-43105739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
57-449
               

               
Cow position:
               
chr16:5257122-5256736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
58-260
               

               
Cow position:
               
chr16:8273707-8273912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 153
               

               
Conread position:
               
58-445
               

               
Cow position:
               
chr16:20633744-20634133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 128
               

               
Conread position:
               
60-211
               

               
Cow position:
               
chr16:15254628-15254780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
60-300
               

               
Cow position:
               
chr16:29677505-29677745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
30, 163
               

               
Conread position:
               
60-417
               

               
Cow position:
               
chr16:30036863-30037229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
61-565
               

               
Cow position:
               
chr16:32132634-32132151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
67-614
               

               
Cow position:
               
chr16:4698872-4699385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 16
               

               
Conread position:
               
68-535
               

               
Cow position:
               
chr16:56445297-56445755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 101
               

               
Conread position:
               
71-272
               

               
Cow position:
               
chr16:30358945-30359147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
21, 149
               

               
Conread position:
               
71-362
               

               
Cow position:
               
chr16:8076384-8076685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
71-523
               

               
Cow position:
               
chr16:23729811-23730277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 358
               

               
Conread position:
               
72-294
               

               
Cow position:
               
chr16:31163015-31163236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 78
               

               
Conread position:
               
72-355
               

               
Cow position:
               
chr16:50521586-50521308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 23
               

               
Conread position:
               
72-612
               

               
Cow position:
               
chr16:3634233-3633686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
72-614
               

               
Cow position:
               
chr16:4399852-4399293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 139
               

               
Conread position:
               
73-348
               

               
Cow position:
               
chr16:25380379-25380659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
83-612
               

               
Cow position:
               
chr16:11105655-11105125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 147
               

               
Conread position:
               
84-213
               

               
Cow position:
               
chr16:8030879-8030750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
84-294
               

               
Cow position:
               
chr16:18745832-18745624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
194, 17
               

               
Conread position:
               
84-298
               

               
Cow position:
               
chr16:33869665-33869874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
195, 116
               

               
Conread position:
               
84-316
               

               
Cow position:
               
chr16:10162917-10162689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
121, 136
               

               
Conread position:
               
84-356
               

               
Cow position:
               
chr16:38119350-38119616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 120
               

               
Conread position:
               
84-394
               

               
Cow position:
               
chr16:12060516-12060201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
196, 120
               

               
Conread position:
               
84-424
               

               
Cow position:
               
chr16:30096035-30096372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 56
               

               
Conread position:
               
84-428
               

               
Cow position:
               
chr16:54515817-54515481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
206, 12
               

               
Conread position:
               
84-526
               

               
Cow position:
               
chr16:54673340-54672898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
84-560
               

               
Cow position:
               
chr16:30027973-30027490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 120
               

               
Conread position:
               
84-593
               

               
Cow position:
               
chr16:23871550-23872067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 121
               

               
Conread position:
               
86-614
               

               
Cow position:
               
chr16:32327756-32327228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 161
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr16:46627744-46628006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
131, 75
               

               
Conread position:
               
88-473
               

               
Cow position:
               
chr16:51869735-51869347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 127
               

               
Conread position:
               
88-614
               

               
Cow position:
               
chr16:39646641-39646128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
89-450
               

               
Cow position:
               
chr16:52889316-52889678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 42
               

               
Conread position:
               
90-201
               

               
Cow position:
               
chr16:22824740-22824851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
90-211
               

               
Cow position:
               
chr16:4736493-4736611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
90-263
               

               
Cow position:
               
chr16:38091129-38091302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
90-293
               

               
Cow position:
               
chr16:27160770-27160974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
90-297
               

               
Cow position:
               
chr16:50667385-50667173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
90-302
               

               
Cow position:
               
chr16:21761876-21762089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
132, 107
               

               
Conread position:
               
90-306
               

               
Cow position:
               
chr16:46452649-46452857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 150
               

               
Conread position:
               
90-356
               

               
Cow position:
               
chr16:14974450-14974703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
183, 55
               

               
Conread position:
               
90-357
               

               
Cow position:
               
chr16:41689787-41689526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
190, 118
               

               
Conread position:
               
90-362
               

               
Cow position:
               
chr16:5836679-5836405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 142
               

               
Conread position:
               
90-369
               

               
Cow position:
               
chr16:17289041-17288757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
186, 139
               

               
Conread position:
               
90-436
               

               
Cow position:
               
chr16:43661545-43661198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 170
               

               
Conread position:
               
90-450
               

               
Cow position:
               
chr16:14758829-14758471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
90-481
               

               
Cow position:
               
chr16:53627334-53627719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 124
               

               
Conread position:
               
90-485
               

               
Cow position:
               
chr16:15809072-15808673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 108
               

               
Conread position:
               
90-519
               

               
Cow position:
               
chr16:30715598-30715155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 215
               

               
Conread position:
               
90-562
               

               
Cow position:
               
chr16:16548703-16548226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 24
               

               
Conread position:
               
90-571
               

               
Cow position:
               
chr16:23738275-23737796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 152
               

               
Conread position:
               
90-606
               

               
Cow position:
               
chr16:22804504-22804997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
90-614
               

               
Cow position:
               
chr16:18427276-18426743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 6
               

               
Conread position:
               
91-445
               

               
Cow position:
               
chr16:570827-571180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 58
               

               
Conread position:
               
92-336
               

               
Cow position:
               
chr16:40330866-40331107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr16:16293303-16293546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
189, 125
               

               
Conread position:
               
92-421
               

               
Cow position:
               
chr16:18074170-18074498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
105, 141
               

               
Conread position:
               
92-424
               

               
Cow position:
               
chr16:37075301-37074967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
92-434
               

               
Cow position:
               
chr16:3322072-3321723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
140, 80
               

               
Conread position:
               
92-439
               

               
Cow position:
               
chr16:18402778-18402439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
92-477
               

               
Cow position:
               
chr16:33442896-33443276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
189, 117
               

               
Conread position:
               
92-482
               

               
Cow position:
               
chr16:7974967-7974569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
92-558
               

               
Cow position:
               
chr16:52228899-52228437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
121, 141
               

               
Conread position:
               
92-578
               

               
Cow position:
               
chr16:12633976-12633515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 93
               

               
Conread position:
               
92-589
               

               
Cow position:
               
chr16:20731330-20731835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 82
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr16:7468237-7467711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 80
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr16:10441866-10441340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 80
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr16:14611772-14611245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr16:23532374-23532900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
92-613
               

               
Cow position:
               
chr16:29051763-29051233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 22
               

               
Conread position:
               
93-422
               

               
Cow position:
               
chr16:53048643-53048311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 106
               

               
Conread position:
               
93-573
               

               
Cow position:
               
chr16:7077652-7078117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 126
               

               
Conread position:
               
94-549
               

               
Cow position:
               
chr16:40382182-40382652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
95-357
               

               
Cow position:
               
chr16:9136257-9136004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 66
               

               
Conread position:
               
95-364
               

               
Cow position:
               
chr16:40315642-40315911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 124
               

               
Conread position:
               
95-429
               

               
Cow position:
               
chr16:52577546-52577212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
133, 29
               

               
Conread position:
               
95-541
               

               
Cow position:
               
chr16:13195251-13195687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr16:45693233-45692974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 23
               

               
Conread position:
               
96-439
               

               
Cow position:
               
chr16:42257535-42257198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
133, 23
               

               
Conread position:
               
96-445
               

               
Cow position:
               
chr16:50014608-50014267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
192, 20
               

               
Conread position:
               
96-455
               

               
Cow position:
               
chr16:51069825-51070203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
96-612
               

               
Cow position:
               
chr16:16096824-16096310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
99-412
               

               
Cow position:
               
chr16:33790753-33791074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
101-401
               

               
Cow position:
               
chr16:56787694-56787996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
180, 16
               

               
Conread position:
               
101-444
               

               
Cow position:
               
chr16:15522175-15521835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
179, 115
               

               
Conread position:
               
101-477
               

               
Cow position:
               
chr16:39278987-39279373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 97
               

               
Conread position:
               
101-612
               

               
Cow position:
               
chr16:3333480-3332995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 44
               

               
Conread position:
               
102-600
               

               
Cow position:
               
chr16:30143118-30143631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 119
               

               
Conread position:
               
104-599
               

               
Cow position:
               
chr16:46253606-46254132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
106-437
               

               
Cow position:
               
chr16:13752054-13752378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 101
               

               
Conread position:
               
109-273
               

               
Cow position:
               
chr16:13496117-13495951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
109-489
               

               
Cow position:
               
chr16:37380345-37379962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 202
               

               
Conread position:
               
109-614
               

               
Cow position:
               
chr16:9235407-9235932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
110-259
               

               
Cow position:
               
chr16:9811139-9811291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 112
               

               
Conread position:
               
110-365
               

               
Cow position:
               
chr16:54084110-54083854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 99
               

               
Conread position:
               
110-480
               

               
Cow position:
               
chr16:18037023-18036668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
112-451
               

               
Cow position:
               
chr16:24672286-24672628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 34
               

               
Conread position:
               
116-431
               

               
Cow position:
               
chr16:689443-689132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
250, 101
               

               
Conread position:
               
116-462
               

               
Cow position:
               
chr16:4840016-4839688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
165, 58
               

               
Conread position:
               
116-468
               

               
Cow position:
               
chr16:21019476-21019119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
116-495
               

               
Cow position:
               
chr16:47343543-47343158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
172, 101
               

               
Conread position:
               
116-608
               

               
Cow position:
               
chr16:48520528-48520031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
116-613
               

               
Cow position:
               
chr16:23248361-23248861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
116-613
               

               
Cow position:
               
chr16:37444823-37445325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
116-613
               

               
Cow position:
               
chr16:52527825-52527329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
116-614
               

               
Cow position:
               
chr16:25453876-25454379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
117-247
               

               
Cow position:
               
chr16:55968509-55968372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 116
               

               
Conread position:
               
117-394
               

               
Cow position:
               
chr16:22860702-22860971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
162, 89
               

               
Conread position:
               
117-399
               

               
Cow position:
               
chr16:13232882-13233162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 102
               

               
Conread position:
               
117-614
               

               
Cow position:
               
chr16:4981310-4981801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 183
               

               
Conread position:
               
119-408
               

               
Cow position:
               
chr16:24747351-24747083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
159, 96
               

               
Conread position:
               
120-348
               

               
Cow position:
               
chr16:10650824-10651053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
99, 180
               

               
Conread position:
               
120-495
               

               
Cow position:
               
chr16:39854518-39854889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 96
               

               
Conread position:
               
121-259
               

               
Cow position:
               
chr16:42638574-42638433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
121-340
               

               
Cow position:
               
chr16:30078736-30078516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
121-583
               

               
Cow position:
               
chr16:33739077-33739538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
123-613
               

               
Cow position:
               
chr16:15978782-15979276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
124-362
               

               
Cow position:
               
chr16:21369544-21369303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
125-317
               

               
Cow position:
               
chr16:14699977-14699787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
125-380
               

               
Cow position:
               
chr16:39238005-39237745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 162
               

               
Conread position:
               
126-259
               

               
Cow position:
               
chr16:15752759-15752630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
130-408
               

               
Cow position:
               
chr16:21905216-21904936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 44
               

               
Conread position:
               
130-418
               

               
Cow position:
               
chr16:1725022-1725309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
130-418
               

               
Cow position:
               
chr16:45535229-45534947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
130-445
               

               
Cow position:
               
chr16:30515535-30515843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 105
               

               
Conread position:
               
131-358
               

               
Cow position:
               
chr16:10207321-10207559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
131-421
               

               
Cow position:
               
chr16:11274956-11274670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
205, 94
               

               
Conread position:
               
131-445
               

               
Cow position:
               
chr16:11619802-11619491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
132-309
               

               
Cow position:
               
chr16:24249778-24249957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
132-317
               

               
Cow position:
               
chr16:30135845-30136026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
147, 17
               

               
Conread position:
               
133-553
               

               
Cow position:
               
chr16:4145114-4144689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 30
               

               
Conread position:
               
134-299
               

               
Cow position:
               
chr16:16015269-16015432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
134-444
               

               
Cow position:
               
chr16:22868126-22868439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
135-401
               

               
Cow position:
               
chr16:53595476-53595741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
136-495
               

               
Cow position:
               
chr16:16479890-16480254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
131, 80
               

               
Conread position:
               
137-412
               

               
Cow position:
               
chr16:26342313-26342047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
144, 78
               

               
Conread position:
               
141-356
               

               
Cow position:
               
chr16:13792615-13792827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
145-272
               

               
Cow position:
               
chr16:30371630-30371507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
145-412
               

               
Cow position:
               
chr16:13973247-13973512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
62, 126
               

               
Conread position:
               
146-360
               

               
Cow position:
               
chr16:42072692-42072902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
147-446
               

               
Cow position:
               
chr16:4372456-4372760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 128
               

               
Conread position:
               
147-568
               

               
Cow position:
               
chr16:14571011-14570586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 69
               

               
Conread position:
               
147-612
               

               
Cow position:
               
chr16:39787431-39787901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 70
               

               
Conread position:
               
149-446
               

               
Cow position:
               
chr16:46434081-46434380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
150-369
               

               
Cow position:
               
chr16:7496231-7496018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
150-410
               

               
Cow position:
               
chr16:27249438-27249181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
150-601
               

               
Cow position:
               
chr16:7082692-7083152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 202
               

               
Conread position:
               
150-610
               

               
Cow position:
               
chr16:24228318-24228778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 56
               

               
Conread position:
               
150-610
               

               
Cow position:
               
chr16:44676908-44676463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
151-584
               

               
Cow position:
               
chr16:40305964-40305529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
151-614
               

               
Cow position:
               
chr16:23990446-23990922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
153-425
               

               
Cow position:
               
chr16:4277681-4277957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
153-523
               

               
Cow position:
               
chr16:13791548-13791164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 104
               

               
Conread position:
               
153-613
               

               
Cow position:
               
chr16:51399721-51400177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
154-614
               

               
Cow position:
               
chr16:43850800-43851261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 142
               

               
Conread position:
               
155-403
               

               
Cow position:
               
chr16:30706136-30705886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
155-450
               

               
Cow position:
               
chr16:27005232-27004930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
155-597
               

               
Cow position:
               
chr16:56912684-56913127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 292
               

               
Conread position:
               
155-614
               

               
Cow position:
               
chr16:4712929-4712471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
156-519
               

               
Cow position:
               
chr16:29538114-29538488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
156-614
               

               
Cow position:
               
chr16:55308513-55308972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 93
               

               
Conread position:
               
157-300
               

               
Cow position:
               
chr16:30614953-30615095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
122, 59
               

               
Conread position:
               
157-614
               

               
Cow position:
               
chr16:50189564-50190020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 59
               

               
Conread position:
               
159-356
               

               
Cow position:
               
chr16:8236297-8236489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
160-348
               

               
Cow position:
               
chr16:33230100-33229914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 57
               

               
Conread position:
               
160-446
               

               
Cow position:
               
chr16:53613333-53613035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
162-614
               

               
Cow position:
               
chr16:16280426-16280848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 54
               

               
Conread position:
               
163-459
               

               
Cow position:
               
chr16:39417099-39417384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
163-581
               

               
Cow position:
               
chr16:12249844-12249392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 55
               

               
Conread position:
               
164-612
               

               
Cow position:
               
chr16:11568098-11568539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
164-614
               

               
Cow position:
               
chr16:499118-498657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 6
               

               
Conread position:
               
166-563
               

               
Cow position:
               
chr16:5293665-5293279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
167-317
               

               
Cow position:
               
chr16:26068949-26068800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
167-541
               

               
Cow position:
               
chr16:9790614-9790984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
167-573
               

               
Cow position:
               
chr16:4103145-4103550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
169-548
               

               
Cow position:
               
chr16:44973509-44973123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
169-580
               

               
Cow position:
               
chr16:41037705-41037289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 44
               

               
Conread position:
               
170-519
               

               
Cow position:
               
chr16:29067175-29066831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 46
               

               
Conread position:
               
170-614
               

               
Cow position:
               
chr16:8807079-8807522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
170-614
               

               
Cow position:
               
chr16:30311092-30311537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 312
               

               
Conread position:
               
170-614
               

               
Cow position:
               
chr16:56150310-56149878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 49
               

               
Conread position:
               
171-300
               

               
Cow position:
               
chr16:15888050-15888177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
108, 45
               

               
Conread position:
               
171-404
               

               
Cow position:
               
chr16:47116681-47116448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 135
               

               
Conread position:
               
171-526
               

               
Cow position:
               
chr16:47509964-47510318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 45
               

               
Conread position:
               
172-352
               

               
Cow position:
               
chr16:51280912-51280732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
172-602
               

               
Cow position:
               
chr16:43804505-43804080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 76
               

               
Conread position:
               
173-388
               

               
Cow position:
               
chr16:10462512-10462723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
6, 44
               

               
Conread position:
               
174-342
               

               
Cow position:
               
chr16:24672876-24673043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
174-399
               

               
Cow position:
               
chr16:28692711-28692927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
174-582
               

               
Cow position:
               
chr16:31159562-31159970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
174-612
               

               
Cow position:
               
chr16:30209760-30209350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
174-614
               

               
Cow position:
               
chr16:26501168-26500732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 125
               

               
Conread position:
               
175-570
               

               
Cow position:
               
chr16:15189195-15188809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
176-477
               

               
Cow position:
               
chr16:42253550-42253865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 245
               

               
Conread position:
               
177-425
               

               
Cow position:
               
chr16:23810918-23810679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
183-614
               

               
Cow position:
               
chr16:39385411-39384969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 117
               

               
Conread position:
               
184-443
               

               
Cow position:
               
chr16:25287691-25287951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
185-417
               

               
Cow position:
               
chr16:4875992-4875763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
190-472
               

               
Cow position:
               
chr16:7997628-7997904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
191-441
               

               
Cow position:
               
chr16:5243964-5243704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
191-455
               

               
Cow position:
               
chr16:25043714-25043456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr16:51530976-51531201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
195-290
               

               
Cow position:
               
chr16:23829582-23829678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
195-445
               

               
Cow position:
               
chr16:36911054-36911294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
200-390
               

               
Cow position:
               
chr16:24637343-24637542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
200-614
               

               
Cow position:
               
chr16:46222964-46223413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
205-614
               

               
Cow position:
               
chr16:28111938-28112352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 215
               

               
Conread position:
               
211-500
               

               
Cow position:
               
chr16:18496187-18496483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 260
               

               
Conread position:
               
217-546
               

               
Cow position:
               
chr16:30587744-30587413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
218-440
               

               
Cow position:
               
chr16:52182234-52182026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
218-467
               

               
Cow position:
               
chr16:33752164-33751911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
218-609
               

               
Cow position:
               
chr16:30939702-30939315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 196
               

               
Conread position:
               
220-353
               

               
Cow position:
               
chr16:30045885-30045748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
221-568
               

               
Cow position:
               
chr16:28816130-28816494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
222-594
               

               
Cow position:
               
chr16:17867509-17867876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
225-614
               

               
Cow position:
               
chr16:49252795-49253169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
227-475
               

               
Cow position:
               
chr16:56198481-56198226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 248
               

               
Conread position:
               
232-614
               

               
Cow position:
               
chr16:43742989-43743352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
233-506
               

               
Cow position:
               
chr16:589964-590227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
234-439
               

               
Cow position:
               
chr16:41892044-41892257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
234-613
               

               
Cow position:
               
chr16:2723732-2724123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 347
               

               
Conread position:
               
234-613
               

               
Cow position:
               
chr16:12159628-12160015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
253-614
               

               
Cow position:
               
chr16:15363677-15363322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
256-438
               

               
Cow position:
               
chr16:33235202-33235390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
256-450
               

               
Cow position:
               
chr16:53989170-53988978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
260-613
               

               
Cow position:
               
chr16:11632380-11632743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
260-614
               

               
Cow position:
               
chr16:39344321-39343965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
265-613
               

               
Cow position:
               
chr16:15495892-15495537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
266-614
               

               
Cow position:
               
chr16:40271976-40271620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
270-614
               

               
Cow position:
               
chr16:44138623-44138968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
275-460
               

               
Cow position:
               
chr16:41654199-41654008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
5, 60
               

               
Conread position:
               
278-460
               

               
Cow position:
               
chr16:6840281-6840469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 177
               

               
Conread position:
               
278-536
               

               
Cow position:
               
chr16:8706641-8706904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 219
               

               
Conread position:
               
278-610
               

               
Cow position:
               
chr16:30019108-30018773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 150
               

               
Conread position:
               
278-612
               

               
Cow position:
               
chr16:33674844-33675192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 152
               

               
Conread position:
               
278-614
               

               
Cow position:
               
chr16:17456393-17456735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
284-609
               

               
Cow position:
               
chr16:47341579-47341915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
285-535
               

               
Cow position:
               
chr16:54227825-54228080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
287-614
               

               
Cow position:
               
chr16:11099897-11100226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
288-432
               

               
Cow position:
               
chr16:18574287-18574135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
288-614
               

               
Cow position:
               
chr16:29967377-29967048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
106, 79
               

               
Conread position:
               
290-446
               

               
Cow position:
               
chr16:33405862-33406021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
291-482
               

               
Cow position:
               
chr16:7458559-7458368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 134
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr16:45173651-45173979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 190
               

               
Conread position:
               
297-591
               

               
Cow position:
               
chr16:17003631-17003320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
37, 123
               
Show alignments to all cow chromosomes.