Cow genome map

Conread name: rpliv0131_d19.y1

Conread position: 1-111
Cow position: chr3:42933643-42933528 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 1-127
Cow position: chr3:29944020-29943888 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 1-128
Cow position: chr3:20888501-20888632 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 108

Conread position: 1-137
Cow position: chr3:44218928-44218787 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 1-138
Cow position: chr3:22078238-22078096 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 1-140
Cow position: chr3:42484087-42483945 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 14

Conread position: 1-141
Cow position: chr3:2636774-2636912 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 109

Conread position: 1-141
Cow position: chr3:49787716-49787576 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 82

Conread position: 1-141
Cow position: chr3:53552824-53552962 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 1-142
Cow position: chr3:74515176-74515321 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 51

Conread position: 1-143
Cow position: chr3:59699491-59699635 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 1-147
Cow position: chr3:3453742-3453591 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 1-148
Cow position: chr3:68624379-68624228 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 58

Conread position: 1-153
Cow position: chr3:64909935-64910090 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 1-156
Cow position: chr3:32248174-32248014 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 1-158
Cow position: chr3:5003792-5003634 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 69

Conread position: 1-158
Cow position: chr3:17531576-17531737 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 89, 71

Conread position: 1-159
Cow position: chr3:4931670-4931841 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1-161
Cow position: chr3:635338-635175 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 26

Conread position: 1-161
Cow position: chr3:11027437-11027272 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 1-161
Cow position: chr3:24220420-24220580 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr3:46259872-46259708 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 1-161
Cow position: chr3:76300934-76300768 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 1-164
Cow position: chr3:70333069-70333226 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 64, 83

Conread position: 1-165
Cow position: chr3:6579640-6579480 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 14

Conread position: 1-165
Cow position: chr3:37641486-37641319 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 89, 74

Conread position: 1-165
Cow position: chr3:79398305-79398136 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 1-165
Cow position: chr3:81616290-81616459 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 1-166
Cow position: chr3:2016592-2016428 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 87, 0

Conread position: 1-166
Cow position: chr3:19044608-19044773 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 120

Conread position: 1-166
Cow position: chr3:55730306-55730476 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 89, 0

Conread position: 1-166
Cow position: chr3:58614624-58614449 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 1-166
Cow position: chr3:80910757-80910588 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 72

Conread position: 1-166
Cow position: chr3:83934884-83934718 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 1-167
Cow position: chr3:29234518-29234690 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 16

Conread position: 1-167
Cow position: chr3:60371144-60370974 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 28

Conread position: 1-169
Cow position: chr3:15795381-15795209 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 1-169
Cow position: chr3:15859222-15859389 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 70, 62

Conread position: 1-169
Cow position: chr3:61680477-61680307 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 88, 132

Conread position: 1-170
Cow position: chr3:35802776-35802952 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 1-170
Cow position: chr3:59317860-59317691 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 77, 55

Conread position: 1-170
Cow position: chr3:65022463-65022283 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 1-170
Cow position: chr3:78258590-78258766 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-172
Cow position: chr3:59885691-59885527 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 1-172
Cow position: chr3:83812438-83812259 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 154

Conread position: 1-172
Cow position: chr3:84154565-84154402 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 1-173
Cow position: chr3:76168469-76168646 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 0

Conread position: 1-175
Cow position: chr3:6265950-6265769 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 1-175
Cow position: chr3:25735743-25735922 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 1-176
Cow position: chr3:25702171-25702359 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 1-176
Cow position: chr3:80173159-80172982 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 75

Conread position: 1-177
Cow position: chr3:20158234-20158050 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 1-177
Cow position: chr3:28884002-28884179 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 91, 57

Conread position: 1-177
Cow position: chr3:62370217-62370037 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 89, 139

Conread position: 1-178
Cow position: chr3:22899571-22899762 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 74

Conread position: 1-178
Cow position: chr3:59681747-59681923 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 89, 51

Conread position: 1-179
Cow position: chr3:4518024-4518198 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 57

Conread position: 1-179
Cow position: chr3:23037348-23037527 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 89, 35

Conread position: 1-179
Cow position: chr3:31793721-31793904 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 1-179
Cow position: chr3:41366540-41366730 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 1-179
Cow position: chr3:60186311-60186125 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 74

Conread position: 1-179
Cow position: chr3:62789790-62789974 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 176

Conread position: 1-180
Cow position: chr3:986175-985993 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 91, 0

Conread position: 1-180
Cow position: chr3:9718089-9718272 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 169

Conread position: 1-180
Cow position: chr3:12178221-12178034 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 142

Conread position: 1-180
Cow position: chr3:24304465-24304646 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 95

Conread position: 1-180
Cow position: chr3:28323370-28323194 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 160, 65

Conread position: 1-180
Cow position: chr3:43388965-43389149 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 88, 0

Conread position: 1-180
Cow position: chr3:45744070-45743886 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 58

Conread position: 1-180
Cow position: chr3:58101835-58101658 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 82

Conread position: 1-180
Cow position: chr3:59947828-59947644 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 88, 0

Conread position: 1-180
Cow position: chr3:61023860-61024044 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 151
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 89, 0

Conread position: 1-180
Cow position: chr3:63860450-63860632 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 89, 56

Conread position: 1-180
Cow position: chr3:70402798-70402623 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 1-181
Cow position: chr3:4271525-4271350 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 1-181
Cow position: chr3:21694387-21694203 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 75, 41

Conread position: 1-181
Cow position: chr3:31115118-31115292 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 83

Conread position: 1-181
Cow position: chr3:51150290-51150106 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 75, 8

Conread position: 1-181
Cow position: chr3:74127340-74127525 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 149

Conread position: 1-181
Cow position: chr3:82195644-82195464 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 89, 27

Conread position: 1-182
Cow position: chr3:12669299-12669113 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 126

Conread position: 1-182
Cow position: chr3:75966622-75966804 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 61

Conread position: 1-182
Cow position: chr3:84807166-84807351 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 88, 21

Conread position: 1-183
Cow position: chr3:18699948-18700135 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 89, 0

Conread position: 1-184
Cow position: chr3:79893336-79893522 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 89, 74

Conread position: 1-185
Cow position: chr3:621601-621418 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 51, 145

Conread position: 1-185
Cow position: chr3:45314512-45314318 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 1-185
Cow position: chr3:70756479-70756667 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 89, 183

Conread position: 1-185
Cow position: chr3:76056128-76056311 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 89, 61

Conread position: 1-187
Cow position: chr3:4120211-4120394 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 66

Conread position: 1-187
Cow position: chr3:18479136-18479326 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 89, 113

Conread position: 1-188
Cow position: chr3:20021428-20021240 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 55

Conread position: 1-188
Cow position: chr3:49363267-49363081 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 50

Conread position: 1-188
Cow position: chr3:78071632-78071821 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 89

Conread position: 1-190
Cow position: chr3:26783347-26783536 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 53, 126

Conread position: 1-190
Cow position: chr3:43895903-43896090 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 61

Conread position: 1-191
Cow position: chr3:48483338-48483146 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 89, 14

Conread position: 1-193
Cow position: chr3:44960105-44959908 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 89, 0

Conread position: 1-194
Cow position: chr3:18831578-18831386 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 138, 72

Conread position: 1-194
Cow position: chr3:28902602-28902794 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 89, 55

Conread position: 1-194
Cow position: chr3:42967232-42967413 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 1-195
Cow position: chr3:14517921-14518115 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 46

Conread position: 1-196
Cow position: chr3:653919-654119 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 1-196
Cow position: chr3:83770894-83770694 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 1-197
Cow position: chr3:72255258-72255457 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 110

Conread position: 1-197
Cow position: chr3:84137654-84137853 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 88, 51

Conread position: 1-199
Cow position: chr3:6728161-6728370 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 1-199
Cow position: chr3:58452205-58452008 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 152, 0

Conread position: 1-200
Cow position: chr3:84928267-84928062 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 1-201
Cow position: chr3:54905766-54905576 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 1-202
Cow position: chr3:22888854-22889060 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 39

Conread position: 1-202
Cow position: chr3:23640499-23640303 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 1-202
Cow position: chr3:28896861-28897063 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 74

Conread position: 1-203
Cow position: chr3:15973730-15973522 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-204
Cow position: chr3:52457069-52456873 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 14

Conread position: 1-204
Cow position: chr3:82366289-82366084 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 89, 58

Conread position: 1-205
Cow position: chr3:11229211-11229411 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 89, 16

Conread position: 1-206
Cow position: chr3:5703336-5703131 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 86, 116

Conread position: 1-208
Cow position: chr3:3584500-3584298 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 93, 57

Conread position: 1-208
Cow position: chr3:13882358-13882570 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 76, 132

Conread position: 1-208
Cow position: chr3:29334250-29334465 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 89, 0

Conread position: 1-208
Cow position: chr3:49996557-49996772 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 84, 0

Conread position: 1-208
Cow position: chr3:56704150-56704370 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 1-209
Cow position: chr3:53083823-53084038 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 66

Conread position: 1-210
Cow position: chr3:1028487-1028697 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 89, 173

Conread position: 1-210
Cow position: chr3:4071609-4071814 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 113

Conread position: 1-210
Cow position: chr3:23132008-23132220 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 85

Conread position: 1-211
Cow position: chr3:25904879-25905101 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-211
Cow position: chr3:40100569-40100770 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 203, 51

Conread position: 1-212
Cow position: chr3:11281929-11281713 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 87, 0

Conread position: 1-212
Cow position: chr3:39988092-39988289 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 208, 69

Conread position: 1-213
Cow position: chr3:23753644-23753447 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1-213
Cow position: chr3:71423409-71423605 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 1-213
Cow position: chr3:74787585-74787378 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 80, 5

Conread position: 1-214
Cow position: chr3:5040143-5040362 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 65, 156

Conread position: 1-214
Cow position: chr3:12090837-12090618 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 75, 126

Conread position: 1-214
Cow position: chr3:39996733-39996946 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 144, 19

Conread position: 1-214
Cow position: chr3:72027799-72027580 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 89, 138

Conread position: 1-214
Cow position: chr3:81234548-81234334 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 91, 53

Conread position: 1-215
Cow position: chr3:6182072-6182277 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 50

Conread position: 1-215
Cow position: chr3:26337856-26338083 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1-218
Cow position: chr3:31804610-31804826 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 151, 82

Conread position: 1-219
Cow position: chr3:2638093-2637866 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 1-219
Cow position: chr3:74644720-74644497 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 92, 174

Conread position: 1-224
Cow position: chr3:13240913-13241141 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 89, 206

Conread position: 1-228
Cow position: chr3:72745395-72745632 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 1-229
Cow position: chr3:27082881-27083121 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 66

Conread position: 1-230
Cow position: chr3:9025922-9026157 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 132

Conread position: 1-232
Cow position: chr3:39247872-39248093 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 126, 14

Conread position: 1-233
Cow position: chr3:3275755-3275525 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 138, 67

Conread position: 1-233
Cow position: chr3:35075032-35074811 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 1-237
Cow position: chr3:15160677-15160450 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 1-238
Cow position: chr3:14547159-14546924 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 66

Conread position: 1-241
Cow position: chr3:56483661-56483432 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 165, 51

Conread position: 1-241
Cow position: chr3:76270048-76269817 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 57

Conread position: 1-242
Cow position: chr3:5707050-5707295 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 84, 206

Conread position: 1-242
Cow position: chr3:47316218-47316461 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 77, 160

Conread position: 1-243
Cow position: chr3:23203069-23203317 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 117

Conread position: 1-243
Cow position: chr3:40145627-40145385 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 196

Conread position: 1-243
Cow position: chr3:63845100-63844847 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 1-244
Cow position: chr3:66014478-66014235 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 152

Conread position: 1-244
Cow position: chr3:75608648-75608414 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 214, 63

Conread position: 1-246
Cow position: chr3:19682866-19682607 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 1-247
Cow position: chr3:31349948-31350191 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 1-247
Cow position: chr3:48459169-48459418 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 1-247
Cow position: chr3:51609024-51609272 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 176

Conread position: 1-247
Cow position: chr3:53703787-53704052 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 1-247
Cow position: chr3:64196985-64196738 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 1-248
Cow position: chr3:39605853-39606109 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 226

Conread position: 1-251
Cow position: chr3:10841976-10841723 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 84, 219

Conread position: 1-253
Cow position: chr3:21866878-21867128 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 88, 42

Conread position: 1-256
Cow position: chr3:26792614-26792379 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 1-261
Cow position: chr3:23804662-23804417 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 89, 16

Conread position: 1-263
Cow position: chr3:75238620-75238356 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 220

Conread position: 1-267
Cow position: chr3:22165255-22165523 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 89, 69

Conread position: 1-268
Cow position: chr3:31361583-31361312 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 51

Conread position: 1-270
Cow position: chr3:65019693-65019974 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 229

Conread position: 1-271
Cow position: chr3:73837558-73837826 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 167

Conread position: 1-273
Cow position: chr3:15950757-15951023 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 62

Conread position: 1-273
Cow position: chr3:18059864-18059590 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 69

Conread position: 1-279
Cow position: chr3:58527537-58527280 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 1-283
Cow position: chr3:45700962-45700684 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 65

Conread position: 1-288
Cow position: chr3:5889285-5889573 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 81

Conread position: 1-289
Cow position: chr3:73299225-73298958 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 278, 14

Conread position: 1-293
Cow position: chr3:5696569-5696862 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 62, 38

Conread position: 1-293
Cow position: chr3:30266534-30266829 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 46

Conread position: 1-296
Cow position: chr3:18180123-18179810 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 1-297
Cow position: chr3:74846565-74846847 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 213, 61

Conread position: 1-298
Cow position: chr3:13380118-13380424 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 66

Conread position: 1-298
Cow position: chr3:61116711-61116995 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 234, 51

Conread position: 1-299
Cow position: chr3:76024663-76024381 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 89, 16

Conread position: 1-300
Cow position: chr3:3649079-3649355 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 103, 50

Conread position: 1-300
Cow position: chr3:17235044-17235348 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 52, 177

Conread position: 1-300
Cow position: chr3:76156146-76155846 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 91

Conread position: 1-301
Cow position: chr3:60264562-60264856 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 279, 5

Conread position: 1-301
Cow position: chr3:74939741-74939417 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 109

Conread position: 1-303
Cow position: chr3:1517353-1517656 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 51

Conread position: 1-303
Cow position: chr3:60389912-60389625 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 65

Conread position: 1-303
Cow position: chr3:73820205-73820512 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 14

Conread position: 1-304
Cow position: chr3:3656675-3656366 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 14

Conread position: 1-304
Cow position: chr3:33329994-33329671 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 0

Conread position: 1-304
Cow position: chr3:34871728-34871425 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 120

Conread position: 1-304
Cow position: chr3:48900170-48900481 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 158

Conread position: 1-304
Cow position: chr3:58317783-58318097 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 1-306
Cow position: chr3:47417411-47417711 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 89, 156

Conread position: 1-307
Cow position: chr3:48468336-48468033 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 89, 208

Conread position: 1-308
Cow position: chr3:3036781-3037073 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 103, 46

Conread position: 1-308
Cow position: chr3:6299618-6299321 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 86, 17

Conread position: 1-308
Cow position: chr3:22221486-22221173 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 56

Conread position: 1-309
Cow position: chr3:12978455-12978764 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 128

Conread position: 1-309
Cow position: chr3:79196923-79196612 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 57, 76

Conread position: 1-313
Cow position: chr3:24468224-24468530 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 19

Conread position: 1-314
Cow position: chr3:45667183-45667505 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 50

Conread position: 1-314
Cow position: chr3:55177591-55177905 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 208, 67

Conread position: 1-315
Cow position: chr3:70333809-70334118 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 89

Conread position: 1-317
Cow position: chr3:81440000-81439679 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 84, 30

Conread position: 1-320
Cow position: chr3:15443566-15443890 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 170

Conread position: 1-327
Cow position: chr3:48072726-48073039 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 16

Conread position: 1-330
Cow position: chr3:2648348-2648686 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 80

Conread position: 1-330
Cow position: chr3:71478752-71478423 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 19

Conread position: 1-334
Cow position: chr3:23920266-23920602 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 219

Conread position: 1-337
Cow position: chr3:19793057-19792717 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 16

Conread position: 1-337
Cow position: chr3:54506866-54506534 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 69, 91

Conread position: 1-337
Cow position: chr3:62046831-62046487 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 206

Conread position: 1-341
Cow position: chr3:70761963-70762302 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 146

Conread position: 1-341
Cow position: chr3:76922513-76922842 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 70

Conread position: 1-342
Cow position: chr3:57274218-57273886 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 28

Conread position: 1-342
Cow position: chr3:75853175-75853511 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 20

Conread position: 1-346
Cow position: chr3:52487789-52487450 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 179

Conread position: 1-346
Cow position: chr3:58764926-58765262 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 196, 54

Conread position: 1-347
Cow position: chr3:12705387-12705731 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 225
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 279, 57

Conread position: 1-347
Cow position: chr3:23105205-23105551 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 223, 90

Conread position: 1-347
Cow position: chr3:53318570-53318218 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 114

Conread position: 1-347
Cow position: chr3:74079478-74079824 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 137

Conread position: 1-348
Cow position: chr3:55434491-55434145 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 85, 184

Conread position: 1-348
Cow position: chr3:75687277-75687625 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 20

Conread position: 1-356
Cow position: chr3:55318738-55319097 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 74

Conread position: 1-358
Cow position: chr3:83699708-83700070 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 89, 122

Conread position: 1-360
Cow position: chr3:54100553-54100915 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 224

Conread position: 1-365
Cow position: chr3:20841719-20842059 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 84

Conread position: 1-367
Cow position: chr3:56612522-56612154 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 21

Conread position: 1-369
Cow position: chr3:4319879-4319503 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 224

Conread position: 1-369
Cow position: chr3:25477952-25477605 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 278, 68

Conread position: 1-369
Cow position: chr3:45211464-45211088 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 242

Conread position: 1-369
Cow position: chr3:76713152-76713529 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 173

Conread position: 1-370
Cow position: chr3:38035428-38035801 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 103

Conread position: 1-370
Cow position: chr3:67520016-67520384 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 61

Conread position: 1-370
Cow position: chr3:74754475-74754121 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 237
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 60, 72

Conread position: 1-372
Cow position: chr3:7662017-7661640 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 151

Conread position: 1-378
Cow position: chr3:38828911-38828551 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 32

Conread position: 1-380
Cow position: chr3:83215429-83215032 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-387
Cow position: chr3:53836550-53836913 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 264
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 243, 83

Conread position: 1-392
Cow position: chr3:67930010-67930411 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 139

Conread position: 1-394
Cow position: chr3:189035-188624 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 1-396
Cow position: chr3:17134491-17134102 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 67

Conread position: 1-398
Cow position: chr3:22232508-22232882 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 269
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 279, 17

Conread position: 1-398
Cow position: chr3:81087476-81087848 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 150

Conread position: 1-406
Cow position: chr3:76267814-76268225 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 68

Conread position: 1-407
Cow position: chr3:43233663-43233255 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 67

Conread position: 1-407
Cow position: chr3:44932672-44932260 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 58

Conread position: 1-410
Cow position: chr3:52651920-52652325 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 71

Conread position: 1-412
Cow position: chr3:18725503-18725887 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 279, 17

Conread position: 1-412
Cow position: chr3:26970971-26970572 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 11

Conread position: 1-416
Cow position: chr3:18687061-18686660 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 70

Conread position: 1-416
Cow position: chr3:56476834-56476425 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 34

Conread position: 1-417
Cow position: chr3:54881916-54881498 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 284
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 205, 51

Conread position: 1-417
Cow position: chr3:71238310-71237899 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 62

Conread position: 1-420
Cow position: chr3:51233944-51234357 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 82

Conread position: 1-424
Cow position: chr3:73395275-73394851 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 38

Conread position: 1-426
Cow position: chr3:83454997-83455419 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 290
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 83, 10

Conread position: 1-429
Cow position: chr3:13301689-13302126 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 44

Conread position: 1-431
Cow position: chr3:69416618-69417061 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 220

Conread position: 1-434
Cow position: chr3:7330978-7331394 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 302
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 279, 14

Conread position: 1-437
Cow position: chr3:5374469-5374057 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 13

Conread position: 1-438
Cow position: chr3:78443407-78443842 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 166

Conread position: 1-439
Cow position: chr3:38864278-38863833 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 44

Conread position: 1-439
Cow position: chr3:49482554-49482984 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 19

Conread position: 1-439
Cow position: chr3:75158515-75158085 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 14

Conread position: 1-440
Cow position: chr3:17456107-17456550 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 216

Conread position: 1-441
Cow position: chr3:16333964-16333517 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 217

Conread position: 1-441
Cow position: chr3:66900567-66901024 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 10

Conread position: 1-443
Cow position: chr3:52419107-52418681 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 312
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 157

Conread position: 1-443
Cow position: chr3:73764055-73764477 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 66

Conread position: 1-444
Cow position: chr3:21081220-21081670 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 1-444
Cow position: chr3:68707862-68708286 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 82

Conread position: 1-444
Cow position: chr3:68880971-68881394 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 82

Conread position: 1-445
Cow position: chr3:13329633-13330058 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 62

Conread position: 1-445
Cow position: chr3:15159192-15158755 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 14

Conread position: 1-445
Cow position: chr3:23471303-23471754 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 81

Conread position: 1-445
Cow position: chr3:54739740-54740157 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 16

Conread position: 1-445
Cow position: chr3:59333918-59333489 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 308
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 19, 28

Conread position: 1-445
Cow position: chr3:78945662-78946125 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 196

Conread position: 1-446
Cow position: chr3:29813386-29812957 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 52

Conread position: 1-447
Cow position: chr3:73467786-73467331 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 1-448
Cow position: chr3:71161948-71161505 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 13

Conread position: 1-449
Cow position: chr3:64280778-64281226 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 64

Conread position: 1-455
Cow position: chr3:74533494-74533051 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 61

Conread position: 1-459
Cow position: chr3:30463016-30463466 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 30

Conread position: 1-460
Cow position: chr3:72474082-72473606 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 346

Conread position: 1-462
Cow position: chr3:53910266-53909811 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 14

Conread position: 1-465
Cow position: chr3:27274687-27274233 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 71

Conread position: 1-469
Cow position: chr3:59391965-59392412 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 126

Conread position: 1-469
Cow position: chr3:70676391-70675907 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 226

Conread position: 1-480
Cow position: chr3:65058859-65058381 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 52

Conread position: 1-485
Cow position: chr3:49679294-49678796 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 73

Conread position: 1-488
Cow position: chr3:59597333-59596876 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 69

Conread position: 1-488
Cow position: chr3:76138619-76138161 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 94

Conread position: 1-489
Cow position: chr3:31309194-31309692 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 14

Conread position: 1-493
Cow position: chr3:78077350-78076858 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 69

Conread position: 1-501
Cow position: chr3:2392809-2393314 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 57

Conread position: 1-503
Cow position: chr3:17221973-17222495 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 268

Conread position: 1-503
Cow position: chr3:77582266-77581777 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 66

Conread position: 1-507
Cow position: chr3:70896199-70895699 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 35

Conread position: 1-508
Cow position: chr3:80973511-80973005 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 96

Conread position: 1-509
Cow position: chr3:71496969-71497496 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 292

Conread position: 1-511
Cow position: chr3:210482-209970 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 268

Conread position: 1-516
Cow position: chr3:55970675-55970156 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 219

Conread position: 1-519
Cow position: chr3:57764373-57763847 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 19

Conread position: 1-519
Cow position: chr3:68648337-68647800 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 228

Conread position: 1-525
Cow position: chr3:79884320-79884852 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 169

Conread position: 1-526
Cow position: chr3:60597697-60597187 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 70

Conread position: 1-529
Cow position: chr3:55189590-55190116 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 233

Conread position: 1-537
Cow position: chr3:18067290-18066756 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 14

Conread position: 1-540
Cow position: chr3:54781833-54782392 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 218

Conread position: 1-543
Cow position: chr3:11987488-11986947 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 216

Conread position: 1-544
Cow position: chr3:59605002-59604487 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 83

Conread position: 1-544
Cow position: chr3:68145695-68146209 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 14

Conread position: 1-545
Cow position: chr3:7763818-7763283 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 138

Conread position: 1-553
Cow position: chr3:5365825-5365291 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 53

Conread position: 1-554
Cow position: chr3:74500417-74499845 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 471

Conread position: 1-569
Cow position: chr3:20663382-20663948 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 165

Conread position: 1-570
Cow position: chr3:16752094-16752658 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 151

Conread position: 1-580
Cow position: chr3:7337627-7338196 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-583
Cow position: chr3:56583008-56582416 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 105

Conread position: 1-584
Cow position: chr3:26904259-26903692 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 51

Conread position: 1-589
Cow position: chr3:48241767-48241191 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 16

Conread position: 1-589
Cow position: chr3:83491240-83490654 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 71

Conread position: 1-590
Cow position: chr3:20802480-20803058 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 80

Conread position: 1-592
Cow position: chr3:59474280-59473678 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 50

Conread position: 1-597
Cow position: chr3:49118870-49119456 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 139

Conread position: 1-601
Cow position: chr3:50768839-50768233 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 217

Conread position: 1-601
Cow position: chr3:80740713-80740141 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 14

Conread position: 1-608
Cow position: chr3:2506316-2506928 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 123

Conread position: 1-609
Cow position: chr3:57577856-57577250 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 30

Conread position: 1-610
Cow position: chr3:18393242-18393833 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 69

Conread position: 1-611
Cow position: chr3:55734118-55733491 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 109

Conread position: 1-611
Cow position: chr3:76172522-76173114 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 82

Conread position: 1-612
Cow position: chr3:10958084-10958662 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 14

Conread position: 1-612
Cow position: chr3:31225582-31225002 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 14

Conread position: 1-612
Cow position: chr3:48363229-48362631 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 81

Conread position: 1-612
Cow position: chr3:54435128-54434520 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 83

Conread position: 1-612
Cow position: chr3:61169970-61169346 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 122

Conread position: 1-614
Cow position: chr3:2008438-2007818 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 179

Conread position: 1-614
Cow position: chr3:2036464-2035844 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 223

Conread position: 1-614
Cow position: chr3:3032569-3031946 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 60

Conread position: 1-614
Cow position: chr3:7566261-7566869 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 61

Conread position: 1-614
Cow position: chr3:11254005-11254601 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 220

Conread position: 1-614
Cow position: chr3:17936687-17937305 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 81

Conread position: 1-614
Cow position: chr3:18459377-18459975 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 14

Conread position: 1-614
Cow position: chr3:20471225-20471825 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 40

Conread position: 1-614
Cow position: chr3:23734929-23735557 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 57

Conread position: 1-614
Cow position: chr3:24872852-24872302 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 14

Conread position: 1-614
Cow position: chr3:28908056-28908677 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 439, 66

Conread position: 1-614
Cow position: chr3:30180243-30179628 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 61

Conread position: 1-614
Cow position: chr3:35883772-35884407 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 331

Conread position: 1-614
Cow position: chr3:48253039-48252440 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 69

Conread position: 1-614
Cow position: chr3:50614783-50614184 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 51

Conread position: 1-614
Cow position: chr3:51033532-51032890 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 21

Conread position: 1-614
Cow position: chr3:53046498-53047096 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 156

Conread position: 1-614
Cow position: chr3:58540357-58540994 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 140

Conread position: 1-614
Cow position: chr3:61224589-61225195 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 85

Conread position: 1-614
Cow position: chr3:62998835-62999452 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 17

Conread position: 1-614
Cow position: chr3:64010648-64011275 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 189

Conread position: 1-614
Cow position: chr3:65237183-65236558 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 55

Conread position: 1-614
Cow position: chr3:65969334-65968700 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 434

Conread position: 1-614
Cow position: chr3:67929099-67929726 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 44

Conread position: 1-614
Cow position: chr3:68303478-68302857 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 167

Conread position: 1-614
Cow position: chr3:71231558-71230951 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 145

Conread position: 1-614
Cow position: chr3:82055968-82056565 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 50

Conread position: 2-126
Cow position: chr3:78115431-78115560 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 2-143
Cow position: chr3:55105987-55106133 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 2-148
Cow position: chr3:28643570-28643422 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 70

Conread position: 2-150
Cow position: chr3:56754376-56754524 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 119

Conread position: 2-155
Cow position: chr3:67942374-67942532 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 2-160
Cow position: chr3:44594783-44594623 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 83, 147

Conread position: 2-166
Cow position: chr3:62186317-62186144 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 2-179
Cow position: chr3:59588803-59588622 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 158

Conread position: 2-182
Cow position: chr3:27246808-27246982 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 81

Conread position: 2-183
Cow position: chr3:47198967-47199151 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 90, 15

Conread position: 2-191
Cow position: chr3:42589258-42589077 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 74, 15

Conread position: 2-204
Cow position: chr3:59828229-59828438 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 2-209
Cow position: chr3:81923634-81923849 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 44

Conread position: 2-210
Cow position: chr3:16107216-16107408 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 2-211
Cow position: chr3:59702333-59702120 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 148

Conread position: 2-218
Cow position: chr3:83889408-83889188 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 88, 158

Conread position: 2-224
Cow position: chr3:79272417-79272639 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 220, 80

Conread position: 2-231
Cow position: chr3:2484161-2483932 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 62

Conread position: 2-240
Cow position: chr3:10668720-10668958 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 62, 148

Conread position: 2-244
Cow position: chr3:59299732-59299493 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 122, 80

Conread position: 2-267
Cow position: chr3:3316649-3316918 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 144

Conread position: 2-273
Cow position: chr3:39912528-39912796 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 83, 18

Conread position: 2-296
Cow position: chr3:72342407-72342109 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 219

Conread position: 2-299
Cow position: chr3:17058388-17058678 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 88, 55

Conread position: 2-299
Cow position: chr3:53209848-53210159 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 55, 230

Conread position: 2-303
Cow position: chr3:3889418-3889709 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 79

Conread position: 2-303
Cow position: chr3:79271550-79271865 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 2-308
Cow position: chr3:46146570-46146879 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 81, 13

Conread position: 2-309
Cow position: chr3:50615104-50615416 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 20

Conread position: 2-330
Cow position: chr3:48810479-48810805 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 223

Conread position: 2-337
Cow position: chr3:1889947-1890286 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 226
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 87, 289

Conread position: 2-343
Cow position: chr3:68616176-68616506 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 210, 68

Conread position: 2-347
Cow position: chr3:54373698-54374046 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 220

Conread position: 2-356
Cow position: chr3:74119271-74119636 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 18

Conread position: 2-368
Cow position: chr3:53875603-53875966 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 209

Conread position: 2-416
Cow position: chr3:3556707-3556287 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 217

Conread position: 2-429
Cow position: chr3:51578165-51578591 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 55

Conread position: 2-437
Cow position: chr3:68627528-68627953 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 73

Conread position: 2-442
Cow position: chr3:3985475-3985047 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 83

Conread position: 2-443
Cow position: chr3:8393499-8393062 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 69

Conread position: 2-445
Cow position: chr3:63180023-63179582 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 216

Conread position: 2-446
Cow position: chr3:29360005-29360422 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 49

Conread position: 2-450
Cow position: chr3:33252733-33253171 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 60

Conread position: 2-467
Cow position: chr3:59610560-59611024 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 45

Conread position: 2-509
Cow position: chr3:75570287-75570782 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 40

Conread position: 2-609
Cow position: chr3:53384121-53384733 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 47

Conread position: 2-611
Cow position: chr3:2025362-2024718 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 268

Conread position: 2-612
Cow position: chr3:2538396-2537805 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 60

Conread position: 2-612
Cow position: chr3:16656326-16656920 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 220

Conread position: 2-614
Cow position: chr3:2675191-2674574 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 219

Conread position: 2-614
Cow position: chr3:9641714-9641093 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 60

Conread position: 2-614
Cow position: chr3:14553031-14552425 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 65

Conread position: 2-614
Cow position: chr3:14725475-14724843 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 510

Conread position: 2-614
Cow position: chr3:15051793-15052382 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 68

Conread position: 2-614
Cow position: chr3:20996843-20997426 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 61

Conread position: 2-614
Cow position: chr3:29596554-29595917 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 18

Conread position: 3-141
Cow position: chr3:58929374-58929517 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 3-149
Cow position: chr3:35079347-35079498 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 3-156
Cow position: chr3:63069203-63069363 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 3-167
Cow position: chr3:33289920-33290089 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 3-168
Cow position: chr3:83199671-83199502 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 87, 77

Conread position: 3-169
Cow position: chr3:2258038-2257867 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 3-171
Cow position: chr3:64800389-64800562 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 3-172
Cow position: chr3:20065989-20066167 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 3-174
Cow position: chr3:52845713-52845541 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 3-177
Cow position: chr3:62312956-62312778 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 87, 137

Conread position: 3-177
Cow position: chr3:73943714-73943892 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 36

Conread position: 3-177
Cow position: chr3:83705377-83705555 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 87, 146

Conread position: 3-183
Cow position: chr3:27286673-27286496 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 3-186
Cow position: chr3:14589072-14589268 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 3-188
Cow position: chr3:32317671-32317860 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 82, 0

Conread position: 3-191
Cow position: chr3:53604586-53604778 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 69

Conread position: 3-194
Cow position: chr3:18249113-18248917 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 3-196
Cow position: chr3:7860092-7860290 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 3-196
Cow position: chr3:19006301-19006104 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 3-196
Cow position: chr3:81136211-81136016 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 14

Conread position: 3-201
Cow position: chr3:35624385-35624586 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 89, 142

Conread position: 3-206
Cow position: chr3:73525077-73525286 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 3-208
Cow position: chr3:1011650-1011437 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 3-212
Cow position: chr3:40212877-40213086 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 81

Conread position: 3-212
Cow position: chr3:80733692-80733906 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 204

Conread position: 3-213
Cow position: chr3:56948938-56949142 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 3-214
Cow position: chr3:41874065-41873846 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 3-215
Cow position: chr3:8181791-8182007 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 129

Conread position: 3-218
Cow position: chr3:80037376-80037589 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 3-244
Cow position: chr3:71474249-71474491 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 56

Conread position: 3-247
Cow position: chr3:11640894-11640642 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 222

Conread position: 3-247
Cow position: chr3:84174462-84174215 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 89, 206

Conread position: 3-270
Cow position: chr3:57704490-57704214 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 65

Conread position: 3-279
Cow position: chr3:58134526-58134805 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 73

Conread position: 3-284
Cow position: chr3:22668570-22668295 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 80, 199

Conread position: 3-289
Cow position: chr3:14194031-14194307 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 216, 65

Conread position: 3-290
Cow position: chr3:42796360-42796638 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 86, 77

Conread position: 3-303
Cow position: chr3:21014798-21015102 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 3-303
Cow position: chr3:79098258-79097961 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 83, 122

Conread position: 3-308
Cow position: chr3:3883662-3883965 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 209, 78

Conread position: 3-314
Cow position: chr3:28648661-28648353 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 86, 63

Conread position: 3-317
Cow position: chr3:15153846-15153537 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 60

Conread position: 3-324
Cow position: chr3:42671691-42671377 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 80, 220

Conread position: 3-325
Cow position: chr3:19793432-19793755 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 68

Conread position: 3-336
Cow position: chr3:58960435-58960763 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 245, 60

Conread position: 3-339
Cow position: chr3:83797665-83798016 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 86, 234

Conread position: 3-340
Cow position: chr3:3913282-3913629 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 3-340
Cow position: chr3:42434170-42434512 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 240
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 82, 30

Conread position: 3-341
Cow position: chr3:77427535-77427221 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 48

Conread position: 3-355
Cow position: chr3:79824761-79825113 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 89, 41

Conread position: 3-356
Cow position: chr3:22845063-22844720 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 82, 126

Conread position: 3-366
Cow position: chr3:55712589-55712221 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 40

Conread position: 3-379
Cow position: chr3:82175667-82175283 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 270
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 115

Conread position: 3-391
Cow position: chr3:22887768-22888148 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 82, 219

Conread position: 3-417
Cow position: chr3:8061278-8060874 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 17

Conread position: 3-445
Cow position: chr3:70334534-70334989 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 216

Conread position: 3-450
Cow position: chr3:66884872-66885331 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 314
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 76, 54

Conread position: 3-453
Cow position: chr3:55124127-55124574 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 13

Conread position: 3-470
Cow position: chr3:2518383-2518848 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 60

Conread position: 3-479
Cow position: chr3:57754317-57754800 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 53

Conread position: 3-482
Cow position: chr3:54903725-54903250 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 169

Conread position: 3-501
Cow position: chr3:13577061-13577539 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 50

Conread position: 3-503
Cow position: chr3:34095814-34096293 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 74

Conread position: 3-504
Cow position: chr3:16547828-16547331 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 201

Conread position: 3-537
Cow position: chr3:49460768-49461315 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 32

Conread position: 3-557
Cow position: chr3:13899296-13899850 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 126

Conread position: 3-557
Cow position: chr3:68587176-68586643 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 58

Conread position: 3-581
Cow position: chr3:17694844-17695425 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 160

Conread position: 3-585
Cow position: chr3:29891248-29891837 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 15

Conread position: 3-596
Cow position: chr3:59000605-59001177 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 61

Conread position: 3-607
Cow position: chr3:75480156-75479571 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 133

Conread position: 3-612
Cow position: chr3:45882057-45881455 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 67

Conread position: 3-613
Cow position: chr3:39066487-39065879 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 3-614
Cow position: chr3:15953924-15954531 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 229

Conread position: 3-614
Cow position: chr3:19711178-19711770 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 126

Conread position: 3-614
Cow position: chr3:25690958-25690338 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 229

Conread position: 3-614
Cow position: chr3:31419853-31419241 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 218

Conread position: 3-614
Cow position: chr3:60933576-60932977 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 224

Conread position: 3-614
Cow position: chr3:73961536-73962134 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 253

Conread position: 4-158
Cow position: chr3:8975004-8974845 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 4-167
Cow position: chr3:67737477-67737309 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 4-170
Cow position: chr3:38817508-38817679 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 4-173
Cow position: chr3:24924974-24924807 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 4-177
Cow position: chr3:8775477-8775300 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 4-196
Cow position: chr3:75222662-75222466 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 4-197
Cow position: chr3:8813944-8814150 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 200

Conread position: 4-208
Cow position: chr3:5149795-5150005 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 4-214
Cow position: chr3:29828257-29828472 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 4-246
Cow position: chr3:36240266-36240020 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 81, 14

Conread position: 4-246
Cow position: chr3:80597884-80597638 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 200

Conread position: 4-247
Cow position: chr3:84250392-84250630 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 181, 53

Conread position: 4-268
Cow position: chr3:83988691-83988425 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 70, 11

Conread position: 4-279
Cow position: chr3:26992730-26992449 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 4-339
Cow position: chr3:26739267-26739597 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 85, 112

Conread position: 4-412
Cow position: chr3:5044653-5045063 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 211

Conread position: 4-453
Cow position: chr3:72577-72121 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 53

Conread position: 4-603
Cow position: chr3:31055856-31056445 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 17

Conread position: 4-614
Cow position: chr3:1830416-1831020 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 146

Conread position: 5-165
Cow position: chr3:67966334-67966498 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 134

Conread position: 5-173
Cow position: chr3:70431590-70431417 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 47, 121

Conread position: 5-180
Cow position: chr3:59271987-59271812 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 68

Conread position: 5-181
Cow position: chr3:24516050-24516233 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 5-181
Cow position: chr3:63202078-63201895 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 5-182
Cow position: chr3:79730675-79730493 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 5-188
Cow position: chr3:51329075-51329261 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 144

Conread position: 5-188
Cow position: chr3:63336649-63336462 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 134

Conread position: 5-191
Cow position: chr3:15792252-15792061 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 182

Conread position: 5-191
Cow position: chr3:46271630-46271820 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 77, 181

Conread position: 5-196
Cow position: chr3:55541175-55540977 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 5-209
Cow position: chr3:22878743-22878543 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 191, 71

Conread position: 5-212
Cow position: chr3:18855234-18855022 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 5-212
Cow position: chr3:45822863-45823075 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 0

Conread position: 5-214
Cow position: chr3:68599779-68599557 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 138

Conread position: 5-239
Cow position: chr3:80709708-80709948 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 80, 0

Conread position: 5-241
Cow position: chr3:27976366-27976606 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 45

Conread position: 5-246
Cow position: chr3:15671997-15672245 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 115

Conread position: 5-260
Cow position: chr3:77081878-77082125 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 191, 57

Conread position: 5-263
Cow position: chr3:59945283-59945024 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 81, 210

Conread position: 5-272
Cow position: chr3:20033991-20034256 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 80, 197

Conread position: 5-288
Cow position: chr3:56678191-56678481 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 227

Conread position: 5-314
Cow position: chr3:11199820-11200136 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 83, 220

Conread position: 5-336
Cow position: chr3:18426544-18426875 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 202

Conread position: 5-337
Cow position: chr3:35153762-35153446 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 5-340
Cow position: chr3:69144852-69144526 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 201

Conread position: 5-349
Cow position: chr3:19199143-19198800 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 74, 22

Conread position: 5-349
Cow position: chr3:44837210-44837567 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 279

Conread position: 5-352
Cow position: chr3:41129870-41129532 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 81, 216

Conread position: 5-356
Cow position: chr3:67698435-67698085 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 179

Conread position: 5-380
Cow position: chr3:2199020-2198661 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 254
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 274, 47

Conread position: 5-386
Cow position: chr3:32310257-32310666 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 283
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 82, 372

Conread position: 5-445
Cow position: chr3:54049873-54050305 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 172

Conread position: 5-449
Cow position: chr3:39969707-39970162 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 225

Conread position: 5-499
Cow position: chr3:61857665-61857156 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 135

Conread position: 5-516
Cow position: chr3:53270989-53270463 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 210

Conread position: 5-597
Cow position: chr3:74088021-74088599 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 136

Conread position: 5-600
Cow position: chr3:55116821-55117409 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 172

Conread position: 5-614
Cow position: chr3:7678821-7678207 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 88

Conread position: 5-614
Cow position: chr3:20130093-20129493 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 215

Conread position: 5-614
Cow position: chr3:79902653-79902048 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 116

Conread position: 6-181
Cow position: chr3:6724357-6724177 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 6-195
Cow position: chr3:44207722-44207920 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 79, 122

Conread position: 6-210
Cow position: chr3:38248811-38248600 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 146

Conread position: 6-213
Cow position: chr3:62864233-62864014 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 105

Conread position: 6-271
Cow position: chr3:44234862-44234610 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 78

Conread position: 6-306
Cow position: chr3:35055821-35056125 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 74

Conread position: 6-337
Cow position: chr3:55819904-55819572 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 46

Conread position: 6-339
Cow position: chr3:59035198-59034859 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 227

Conread position: 6-365
Cow position: chr3:83846050-83845701 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 206, 57

Conread position: 6-399
Cow position: chr3:39661299-39661690 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 150

Conread position: 6-417
Cow position: chr3:30008751-30009168 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 38

Conread position: 6-445
Cow position: chr3:17957616-17957181 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 70

Conread position: 6-500
Cow position: chr3:48851812-48852302 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 205

Conread position: 6-610
Cow position: chr3:34271054-34270484 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 59

Conread position: 6-614
Cow position: chr3:3954659-3954040 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 118

Conread position: 6-614
Cow position: chr3:8591213-8591795 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 194

Conread position: 6-614
Cow position: chr3:15388374-15387750 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 9

Conread position: 7-180
Cow position: chr3:77171472-77171294 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 7-347
Cow position: chr3:46005861-46006212 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 126

Conread position: 7-418
Cow position: chr3:52608335-52607924 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 209

Conread position: 7-614
Cow position: chr3:59649412-59648809 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 69

Conread position: 9-177
Cow position: chr3:31168698-31168531 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 9-193
Cow position: chr3:5551657-5551847 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 9-197
Cow position: chr3:6288387-6288579 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 177

Conread position: 9-214
Cow position: chr3:81480809-81480601 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 124

Conread position: 9-220
Cow position: chr3:52643780-52643996 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 31, 102

Conread position: 9-298
Cow position: chr3:30026522-30026239 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 76, 211

Conread position: 9-348
Cow position: chr3:8564707-8565059 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 61

Conread position: 9-355
Cow position: chr3:83727097-83727440 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 188

Conread position: 9-364
Cow position: chr3:1788091-1787745 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 76, 214

Conread position: 9-407
Cow position: chr3:55947751-55947327 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 212

Conread position: 9-431
Cow position: chr3:45279621-45279185 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 258

Conread position: 9-476
Cow position: chr3:24548682-24549149 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 281

Conread position: 9-541
Cow position: chr3:53592534-53593081 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 197

Conread position: 9-614
Cow position: chr3:18185229-18184619 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 217

Conread position: 10-165
Cow position: chr3:73305265-73305105 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 10-233
Cow position: chr3:76931965-76932177 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 10-355
Cow position: chr3:13890631-13890274 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 220

Conread position: 11-351
Cow position: chr3:62434993-62435358 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 240
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 11-369
Cow position: chr3:25945245-25944870 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 27

Conread position: 11-471
Cow position: chr3:46160709-46161157 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 116

Conread position: 11-612
Cow position: chr3:65413124-65413744 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 205

Conread position: 12-441
Cow position: chr3:14801896-14801469 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 197

Conread position: 13-440
Cow position: chr3:77365139-77365575 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 330

Conread position: 13-614
Cow position: chr3:55010023-55010620 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 57

Conread position: 14-181
Cow position: chr3:19788684-19788852 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 46

Conread position: 14-331
Cow position: chr3:54551563-54551899 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 120

Conread position: 14-438
Cow position: chr3:44102114-44101702 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 52

Conread position: 17-258
Cow position: chr3:59829469-59829231 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 90

Conread position: 17-306
Cow position: chr3:34784369-34784062 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 243

Conread position: 17-314
Cow position: chr3:29946533-29946242 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 68, 203

Conread position: 17-380
Cow position: chr3:22734114-22734496 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 62, 217

Conread position: 17-610
Cow position: chr3:74234329-74233760 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 177

Conread position: 17-614
Cow position: chr3:37041565-37040985 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 58

Conread position: 18-177
Cow position: chr3:36411940-36412106 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 18-503
Cow position: chr3:59451746-59451251 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 15

Conread position: 20-155
Cow position: chr3:17039758-17039616 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 20-175
Cow position: chr3:20911266-20911426 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 20-210
Cow position: chr3:5305949-5305747 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 20-213
Cow position: chr3:46266344-46266147 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 174

Conread position: 20-308
Cow position: chr3:1093331-1093026 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 126, 11

Conread position: 20-335
Cow position: chr3:24615699-24616010 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 50, 134

Conread position: 20-343
Cow position: chr3:81039605-81039927 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 67, 27

Conread position: 20-606
Cow position: chr3:75050480-75051076 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 47

Conread position: 20-614
Cow position: chr3:72391229-72390628 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 202

Conread position: 21-172
Cow position: chr3:58010688-58010841 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 69, 114

Conread position: 21-259
Cow position: chr3:79899499-79899250 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 21-299
Cow position: chr3:64526989-64526710 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 71, 14

Conread position: 21-337
Cow position: chr3:18143973-18144292 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 280

Conread position: 21-380
Cow position: chr3:74134847-74134484 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 21

Conread position: 21-417
Cow position: chr3:30055309-30055704 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 64, 204

Conread position: 21-450
Cow position: chr3:18498158-18497734 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 207

Conread position: 21-513
Cow position: chr3:53572609-53573104 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 209

Conread position: 22-214
Cow position: chr3:33048253-33048450 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 22-348
Cow position: chr3:1452984-1453308 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 128

Conread position: 23-176
Cow position: chr3:25037856-25038009 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 46

Conread position: 23-180
Cow position: chr3:38283424-38283585 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 23-211
Cow position: chr3:15237552-15237743 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 102

Conread position: 23-337
Cow position: chr3:27108740-27109077 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 241

Conread position: 23-342
Cow position: chr3:15751576-15751902 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 28

Conread position: 23-345
Cow position: chr3:26982196-26981881 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 174

Conread position: 23-348
Cow position: chr3:14599067-14598764 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 60

Conread position: 23-443
Cow position: chr3:4032105-4031684 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 117

Conread position: 23-450
Cow position: chr3:14601565-14602004 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 47

Conread position: 23-482
Cow position: chr3:61323472-61323031 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 172

Conread position: 23-614
Cow position: chr3:54960304-54959744 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 29

Conread position: 23-614
Cow position: chr3:77271140-77271732 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 47

Conread position: 24-181
Cow position: chr3:7045447-7045286 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 24-218
Cow position: chr3:21642133-21641927 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 140

Conread position: 25-213
Cow position: chr3:69650753-69650943 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 31

Conread position: 25-535
Cow position: chr3:31207015-31206497 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 219

Conread position: 26-614
Cow position: chr3:70565599-70566193 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 197

Conread position: 27-612
Cow position: chr3:73709181-73708601 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 32

Conread position: 28-614
Cow position: chr3:61539937-61539342 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 115

Conread position: 31-612
Cow position: chr3:80565094-80564501 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 60

Conread position: 33-600
Cow position: chr3:79220989-79220409 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 202

Conread position: 34-337
Cow position: chr3:79270837-79271134 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 97, 27

Conread position: 34-470
Cow position: chr3:53739067-53739500 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 49

Conread position: 34-484
Cow position: chr3:28898092-28898553 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 187

Conread position: 35-176
Cow position: chr3:3163979-3164127 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 35-242
Cow position: chr3:36160066-36160276 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 32

Conread position: 35-253
Cow position: chr3:3947158-3946939 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 180, 26

Conread position: 36-356
Cow position: chr3:20677724-20678028 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 244, 44

Conread position: 36-433
Cow position: chr3:75045745-75046144 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 119

Conread position: 38-312
Cow position: chr3:79645304-79645594 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 179

Conread position: 39-612
Cow position: chr3:82461298-82460713 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 51

Conread position: 42-278
Cow position: chr3:63177601-63177362 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 43-610
Cow position: chr3:59630393-59630957 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 9

Conread position: 44-614
Cow position: chr3:80581775-80581224 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 106

Conread position: 47-250
Cow position: chr3:74900522-74900727 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 174

Conread position: 48-308
Cow position: chr3:84243654-84243915 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 78

Conread position: 48-310
Cow position: chr3:5366884-5366622 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 102

Conread position: 48-614
Cow position: chr3:59588629-59588064 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 115

Conread position: 49-322
Cow position: chr3:58973411-58973143 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 16, 195

Conread position: 49-356
Cow position: chr3:49790695-49791007 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 156

Conread position: 49-479
Cow position: chr3:67704655-67704216 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 41

Conread position: 52-211
Cow position: chr3:64373044-64373209 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 52-217
Cow position: chr3:28258199-28258037 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 52-233
Cow position: chr3:61467081-61467264 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 52-262
Cow position: chr3:26230221-26229996 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 176

Conread position: 52-270
Cow position: chr3:55984210-55983986 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 85

Conread position: 52-279
Cow position: chr3:10104150-10103930 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 19

Conread position: 52-293
Cow position: chr3:22510135-22509894 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 52-294
Cow position: chr3:84175712-84175959 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 29

Conread position: 52-369
Cow position: chr3:59621536-59621845 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 163

Conread position: 52-409
Cow position: chr3:15752524-15752878 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 104

Conread position: 52-431
Cow position: chr3:70900002-70899628 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 53

Conread position: 52-445
Cow position: chr3:52863071-52863469 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 158

Conread position: 52-485
Cow position: chr3:17934825-17935253 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 179

Conread position: 52-501
Cow position: chr3:80072235-80071775 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 38

Conread position: 52-537
Cow position: chr3:49231111-49230637 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 29

Conread position: 52-553
Cow position: chr3:49383062-49382558 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 52-611
Cow position: chr3:46901304-46900744 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 52-614
Cow position: chr3:35299777-35299220 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 16

Conread position: 53-285
Cow position: chr3:35621411-35621178 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 17

Conread position: 53-291
Cow position: chr3:83822478-83822713 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 39, 15

Conread position: 53-303
Cow position: chr3:71238577-71238331 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 95

Conread position: 53-405
Cow position: chr3:55835709-55836075 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 253

Conread position: 53-408
Cow position: chr3:74878483-74878838 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 162

Conread position: 53-415
Cow position: chr3:2680622-2680255 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 16

Conread position: 53-614
Cow position: chr3:14263503-14262940 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 136

Conread position: 53-614
Cow position: chr3:48296807-48296250 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 54-573
Cow position: chr3:12711805-12712339 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 521

Conread position: 55-272
Cow position: chr3:27727721-27727940 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 112

Conread position: 55-366
Cow position: chr3:57760607-57760294 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 159

Conread position: 55-386
Cow position: chr3:15506558-15506220 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 92

Conread position: 55-601
Cow position: chr3:79292928-79292388 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 16

Conread position: 55-613
Cow position: chr3:31421838-31422400 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 206

Conread position: 56-307
Cow position: chr3:43727179-43726931 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 57-498
Cow position: chr3:81470989-81471436 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 166

Conread position: 58-212
Cow position: chr3:21997682-21997841 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 58-279
Cow position: chr3:72503790-72504016 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 58-450
Cow position: chr3:8394050-8393648 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 160

Conread position: 59-396
Cow position: chr3:27940038-27940365 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 96

Conread position: 60-612
Cow position: chr3:80053440-80053992 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 22

Conread position: 61-612
Cow position: chr3:4050296-4049749 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 124

Conread position: 65-247
Cow position: chr3:23667719-23667537 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 153

Conread position: 68-385
Cow position: chr3:26960492-26960821 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 166

Conread position: 68-614
Cow position: chr3:52017867-52017305 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 377

Conread position: 70-216
Cow position: chr3:67959828-67959975 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 78

Conread position: 70-612
Cow position: chr3:55271951-55272485 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 147

Conread position: 71-210
Cow position: chr3:20515725-20515869 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 71-210
Cow position: chr3:53904546-53904406 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 62

Conread position: 71-330
Cow position: chr3:24935457-24935203 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 14, 145

Conread position: 71-438
Cow position: chr3:57624557-57624184 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 149

Conread position: 71-444
Cow position: chr3:49139961-49140332 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 207, 97

Conread position: 71-453
Cow position: chr3:38691314-38691696 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 10

Conread position: 71-464
Cow position: chr3:70401989-70401598 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 82

Conread position: 71-614
Cow position: chr3:26218960-26219515 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 153

Conread position: 71-614
Cow position: chr3:26553631-26554177 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 8

Conread position: 71-614
Cow position: chr3:58767356-58766841 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 188

Conread position: 72-375
Cow position: chr3:63269314-63269013 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 147

Conread position: 72-596
Cow position: chr3:31046865-31047377 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 74

Conread position: 72-613
Cow position: chr3:62826527-62827066 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 67

Conread position: 73-213
Cow position: chr3:22871759-22871897 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 73-292
Cow position: chr3:73237281-73237063 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 207, 13

Conread position: 76-268
Cow position: chr3:45897687-45897499 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 76-268
Cow position: chr3:45972369-45972557 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 83-356
Cow position: chr3:3638254-3637992 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 198, 60

Conread position: 83-449
Cow position: chr3:54771083-54770714 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 66

Conread position: 83-469
Cow position: chr3:27545743-27546144 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 112

Conread position: 84-211
Cow position: chr3:5249307-5249429 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 84-223
Cow position: chr3:11292173-11292312 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 84-247
Cow position: chr3:81277393-81277556 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 134
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 84-258
Cow position: chr3:74088626-74088796 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 84-324
Cow position: chr3:59883994-59884235 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 84-347
Cow position: chr3:74502250-74502507 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 41

Conread position: 84-356
Cow position: chr3:66883869-66884135 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 66

Conread position: 84-369
Cow position: chr3:15903886-15904178 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 137

Conread position: 84-437
Cow position: chr3:42367439-42367767 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 47, 31

Conread position: 84-443
Cow position: chr3:68582925-68583286 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 19

Conread position: 84-476
Cow position: chr3:53113250-53112851 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 141

Conread position: 84-601
Cow position: chr3:37599353-37599858 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 131

Conread position: 84-612
Cow position: chr3:49650463-49649928 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 144

Conread position: 84-612
Cow position: chr3:59799324-59798800 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 142

Conread position: 84-613
Cow position: chr3:55085094-55085643 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 470

Conread position: 84-614
Cow position: chr3:14626075-14626611 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 139

Conread position: 85-582
Cow position: chr3:27290014-27289514 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 88-442
Cow position: chr3:39171414-39171767 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 79

Conread position: 88-526
Cow position: chr3:58285837-58286264 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 88-614
Cow position: chr3:34556169-34556676 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 57

Conread position: 89-356
Cow position: chr3:27696909-27697173 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 22

Conread position: 89-445
Cow position: chr3:54862348-54862710 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 195, 29

Conread position: 89-450
Cow position: chr3:71430134-71430498 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 346

Conread position: 89-454
Cow position: chr3:66597682-66598049 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 243
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 227, 133

Conread position: 89-512
Cow position: chr3:5456160-5456598 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 283
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 105, 380

Conread position: 89-526
Cow position: chr3:36671925-36672371 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 45

Conread position: 89-590
Cow position: chr3:52147581-52148106 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 364

Conread position: 89-614
Cow position: chr3:42178221-42177702 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 22

Conread position: 89-614
Cow position: chr3:51012483-51012993 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 72

Conread position: 90-220
Cow position: chr3:11606389-11606252 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 90-302
Cow position: chr3:20993882-20993670 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 130, 100

Conread position: 90-329
Cow position: chr3:30222260-30222018 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 90-352
Cow position: chr3:34669664-34669918 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 88

Conread position: 90-367
Cow position: chr3:7940488-7940761 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 123, 53

Conread position: 90-385
Cow position: chr3:53240325-53240047 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 42

Conread position: 90-405
Cow position: chr3:23444819-23445136 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 167

Conread position: 90-424
Cow position: chr3:8733290-8733599 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 277, 56

Conread position: 90-443
Cow position: chr3:44861244-44861592 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 242
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 6

Conread position: 90-445
Cow position: chr3:56308-56655 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 60

Conread position: 90-447
Cow position: chr3:17895917-17895566 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 90-459
Cow position: chr3:45648199-45647835 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 55

Conread position: 90-465
Cow position: chr3:12287291-12286930 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 34

Conread position: 90-524
Cow position: chr3:5100703-5101125 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 123

Conread position: 90-582
Cow position: chr3:72676160-72675665 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 120

Conread position: 90-601
Cow position: chr3:61840344-61839849 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 60

Conread position: 90-601
Cow position: chr3:80468609-80469093 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 31

Conread position: 90-608
Cow position: chr3:53588316-53588848 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 6

Conread position: 90-613
Cow position: chr3:37485728-37486244 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 56

Conread position: 90-614
Cow position: chr3:26920979-26920438 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 92

Conread position: 90-614
Cow position: chr3:35852402-35852931 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 162

Conread position: 90-614
Cow position: chr3:38347259-38346744 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 55

Conread position: 90-614
Cow position: chr3:81371718-81371201 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 192

Conread position: 91-388
Cow position: chr3:76015360-76015070 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 188, 145

Conread position: 91-519
Cow position: chr3:20437588-20438021 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 120

Conread position: 92-356
Cow position: chr3:56150988-56150722 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 181, 125

Conread position: 92-369
Cow position: chr3:78896714-78896444 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 118

Conread position: 92-445
Cow position: chr3:5097274-5096917 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 124

Conread position: 92-497
Cow position: chr3:57479259-57479667 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 270
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 189, 80

Conread position: 92-508
Cow position: chr3:83815721-83816150 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 32

Conread position: 92-534
Cow position: chr3:56698013-56697564 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 119

Conread position: 92-537
Cow position: chr3:20136783-20137231 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 50

Conread position: 92-564
Cow position: chr3:13517090-13517561 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 126

Conread position: 92-613
Cow position: chr3:6863558-6864081 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 84

Conread position: 92-613
Cow position: chr3:33124021-33124544 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 80

Conread position: 92-613
Cow position: chr3:47271636-47272165 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 25

Conread position: 92-613
Cow position: chr3:66828697-66829236 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 74

Conread position: 92-613
Cow position: chr3:78111181-78110659 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 79

Conread position: 92-614
Cow position: chr3:6443305-6442780 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 124

Conread position: 92-614
Cow position: chr3:20746493-20747035 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 288

Conread position: 92-614
Cow position: chr3:54809227-54808704 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 116

Conread position: 93-417
Cow position: chr3:23448071-23448389 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 133

Conread position: 93-455
Cow position: chr3:27532589-27532959 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 25

Conread position: 93-561
Cow position: chr3:31771747-31771293 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 95-303
Cow position: chr3:34675786-34675581 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 95-407
Cow position: chr3:55991804-55992120 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 191, 60

Conread position: 95-451
Cow position: chr3:48629525-48629878 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 51, 24

Conread position: 95-501
Cow position: chr3:66708003-66708414 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 24

Conread position: 95-544
Cow position: chr3:50462400-50461956 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 24

Conread position: 95-563
Cow position: chr3:54340358-54340815 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 23

Conread position: 95-601
Cow position: chr3:31907080-31907607 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 21

Conread position: 95-613
Cow position: chr3:23477054-23476548 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 354
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 61

Conread position: 95-614
Cow position: chr3:15684858-15685361 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 24

Conread position: 96-341
Cow position: chr3:81359042-81359292 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 123

Conread position: 96-440
Cow position: chr3:26493168-26493505 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 234
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 23

Conread position: 96-450
Cow position: chr3:73759454-73759810 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 50

Conread position: 96-465
Cow position: chr3:66292113-66292480 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 130

Conread position: 96-479
Cow position: chr3:78530605-78530222 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 277
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 20, 16

Conread position: 99-365
Cow position: chr3:55778096-55777834 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 20

Conread position: 100-240
Cow position: chr3:45222092-45222234 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 121
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 100-613
Cow position: chr3:59604028-59603512 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 72

Conread position: 101-246
Cow position: chr3:31505038-31505183 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 120

Conread position: 101-582
Cow position: chr3:75727524-75728012 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 101-614
Cow position: chr3:79591833-79592343 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 103

Conread position: 102-340
Cow position: chr3:79092335-79092573 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 125

Conread position: 102-614
Cow position: chr3:66609787-66610294 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 61

Conread position: 103-608
Cow position: chr3:46350727-46350193 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 25

Conread position: 106-532
Cow position: chr3:10347404-10346974 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 39

Conread position: 109-279
Cow position: chr3:6403469-6403304 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 109-468
Cow position: chr3:65800635-65800286 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 33

Conread position: 109-614
Cow position: chr3:4457021-4457529 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 120

Conread position: 110-428
Cow position: chr3:14632934-14633255 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 187

Conread position: 110-519
Cow position: chr3:72019165-72018763 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 35

Conread position: 110-614
Cow position: chr3:32325717-32326236 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 108

Conread position: 110-614
Cow position: chr3:65325321-65325836 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 109

Conread position: 111-397
Cow position: chr3:34937892-34937602 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 106, 44

Conread position: 111-425
Cow position: chr3:35915754-35915438 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 106

Conread position: 116-613
Cow position: chr3:21101016-21100517 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 60

Conread position: 116-613
Cow position: chr3:24441892-24442392 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 56

Conread position: 116-613
Cow position: chr3:73212034-73211543 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 105

Conread position: 117-416
Cow position: chr3:22820613-22820312 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 23

Conread position: 117-485
Cow position: chr3:83921226-83920875 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 28

Conread position: 119-445
Cow position: chr3:23091935-23092274 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 180, 0

Conread position: 119-556
Cow position: chr3:19708068-19708494 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 31

Conread position: 120-518
Cow position: chr3:67022604-67022203 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 224, 96

Conread position: 121-559
Cow position: chr3:64717069-64716623 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 124-356
Cow position: chr3:36446683-36446911 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 87, 106

Conread position: 124-407
Cow position: chr3:63332853-63332562 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 91

Conread position: 126-303
Cow position: chr3:80953680-80953504 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 154, 8

Conread position: 126-610
Cow position: chr3:61171475-61171938 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 88

Conread position: 126-614
Cow position: chr3:43528199-43528692 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 161

Conread position: 127-613
Cow position: chr3:23203470-23203958 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 45

Conread position: 128-613
Cow position: chr3:24433579-24433091 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 44

Conread position: 130-324
Cow position: chr3:15992747-15992552 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 170

Conread position: 130-373
Cow position: chr3:70632050-70631809 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 195
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 39, 121

Conread position: 130-439
Cow position: chr3:75057105-75057394 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 85, 20

Conread position: 130-612
Cow position: chr3:29807492-29807011 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 32

Conread position: 131-348
Cow position: chr3:35005804-35005595 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 148, 79

Conread position: 132-548
Cow position: chr3:69849484-69849891 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 17

Conread position: 133-380
Cow position: chr3:22907702-22907938 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 198, 92

Conread position: 133-392
Cow position: chr3:55106413-55106676 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 147, 81

Conread position: 133-567
Cow position: chr3:39328426-39328004 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 195

Conread position: 134-296
Cow position: chr3:34117182-34117020 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 134-455
Cow position: chr3:81277673-81278001 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 82

Conread position: 135-399
Cow position: chr3:83201500-83201768 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 82

Conread position: 139-385
Cow position: chr3:66866381-66866626 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 39

Conread position: 139-613
Cow position: chr3:6078310-6078789 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 29

Conread position: 140-614
Cow position: chr3:68342229-68342715 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 168

Conread position: 143-612
Cow position: chr3:48530649-48530185 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 18

Conread position: 144-380
Cow position: chr3:72290375-72290138 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 71

Conread position: 145-614
Cow position: chr3:28634711-28635182 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 27

Conread position: 146-455
Cow position: chr3:5416207-5416528 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 96

Conread position: 147-412
Cow position: chr3:41328453-41328202 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 132, 24

Conread position: 147-614
Cow position: chr3:49218302-49218763 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 69

Conread position: 148-330
Cow position: chr3:23037609-23037798 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 148-598
Cow position: chr3:59515115-59514684 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 61

Conread position: 149-507
Cow position: chr3:19824246-19824608 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 132, 67

Conread position: 149-586
Cow position: chr3:8147657-8148090 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 67

Conread position: 150-294
Cow position: chr3:54551873-54552014 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 129, 13

Conread position: 150-411
Cow position: chr3:25755033-25754784 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 130, 64

Conread position: 150-614
Cow position: chr3:27544326-27544794 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 20

Conread position: 150-614
Cow position: chr3:80081804-80082272 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 156

Conread position: 151-273
Cow position: chr3:15683175-15683298 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 69

Conread position: 151-409
Cow position: chr3:62789996-62790257 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 99

Conread position: 151-437
Cow position: chr3:56703841-56704132 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 10, 134

Conread position: 151-589
Cow position: chr3:49793404-49792983 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 95

Conread position: 154-614
Cow position: chr3:9843592-9843119 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 55

Conread position: 155-427
Cow position: chr3:52650524-52650797 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 51

Conread position: 155-428
Cow position: chr3:17450935-17451203 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 189, 96

Conread position: 155-430
Cow position: chr3:84000617-84000341 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 61

Conread position: 155-440
Cow position: chr3:22171195-22170908 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 65, 142

Conread position: 155-570
Cow position: chr3:36174061-36174487 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 142

Conread position: 155-572
Cow position: chr3:51146662-51147075 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 25

Conread position: 155-614
Cow position: chr3:48269869-48269405 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 156-418
Cow position: chr3:16362732-16362998 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 122, 61

Conread position: 156-464
Cow position: chr3:18763893-18763589 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 33

Conread position: 158-371
Cow position: chr3:15859665-15859875 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 205, 121

Conread position: 160-435
Cow position: chr3:48923522-48923789 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 183, 54

Conread position: 161-386
Cow position: chr3:22899998-22900220 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 119, 9

Conread position: 161-438
Cow position: chr3:42483906-42483621 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 161-511
Cow position: chr3:12324068-12323716 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 59

Conread position: 162-612
Cow position: chr3:28675983-28675536 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 8

Conread position: 163-330
Cow position: chr3:53192430-53192590 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 52

Conread position: 163-335
Cow position: chr3:15232027-15231857 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 54

Conread position: 163-421
Cow position: chr3:28692433-28692691 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 79

Conread position: 163-502
Cow position: chr3:22953860-22954192 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 15

Conread position: 163-593
Cow position: chr3:57553852-57554277 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 133

Conread position: 163-614
Cow position: chr3:44622890-44623366 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 45

Conread position: 164-314
Cow position: chr3:18056434-18056291 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 115, 33

Conread position: 164-445
Cow position: chr3:78894330-78894600 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 52

Conread position: 164-464
Cow position: chr3:83934503-83934209 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 117, 53

Conread position: 164-551
Cow position: chr3:31501343-31500963 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 52

Conread position: 164-614
Cow position: chr3:79207991-79208443 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 110

Conread position: 165-478
Cow position: chr3:78201261-78200948 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 5

Conread position: 165-612
Cow position: chr3:61678699-61678236 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 180

Conread position: 166-348
Cow position: chr3:25060073-25059891 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 115, 51

Conread position: 167-366
Cow position: chr3:59885385-59885180 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 168-461
Cow position: chr3:49787405-49787108 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 111, 47

Conread position: 169-303
Cow position: chr3:76169294-76169427 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 110, 47

Conread position: 169-611
Cow position: chr3:30358643-30359084 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 46

Conread position: 170-307
Cow position: chr3:1534627-1534766 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 170-312
Cow position: chr3:30907356-30907498 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 12

Conread position: 170-324
Cow position: chr3:27247200-27247351 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 115, 51

Conread position: 170-353
Cow position: chr3:83707984-83708159 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 111, 44

Conread position: 170-356
Cow position: chr3:61024312-61024498 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 109, 39

Conread position: 170-380
Cow position: chr3:80908294-80908074 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 46

Conread position: 170-423
Cow position: chr3:73590005-73590262 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 130

Conread position: 170-439
Cow position: chr3:63860900-63861181 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 81

Conread position: 170-459
Cow position: chr3:24304926-24305205 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 40

Conread position: 170-488
Cow position: chr3:59271532-59271230 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 127

Conread position: 170-612
Cow position: chr3:6265506-6265053 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 71

Conread position: 170-612
Cow position: chr3:77227314-77226863 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 129

Conread position: 170-614
Cow position: chr3:3164506-3164947 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 49

Conread position: 170-614
Cow position: chr3:41366991-41367437 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 128

Conread position: 170-614
Cow position: chr3:44534770-44535215 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 45

Conread position: 171-438
Cow position: chr3:49731651-49731916 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 46

Conread position: 171-611
Cow position: chr3:30701298-30700867 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 129

Conread position: 171-614
Cow position: chr3:14717781-14717353 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 5

Conread position: 172-612
Cow position: chr3:2903306-2903750 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 111

Conread position: 172-614
Cow position: chr3:47284823-47284381 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 43

Conread position: 173-514
Cow position: chr3:17952644-17952301 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 44

Conread position: 174-334
Cow position: chr3:54557613-54557446 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 174-361
Cow position: chr3:3062553-3062363 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 134

Conread position: 174-599
Cow position: chr3:27286216-27285789 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 45

Conread position: 175-369
Cow position: chr3:55062887-55063075 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 176-348
Cow position: chr3:27212347-27212176 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 103, 123

Conread position: 176-594
Cow position: chr3:67161927-67161495 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 42

Conread position: 177-417
Cow position: chr3:4087177-4087424 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 170

Conread position: 178-445
Cow position: chr3:23945083-23944811 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 85

Conread position: 178-567
Cow position: chr3:16004005-16004392 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 128

Conread position: 180-361
Cow position: chr3:65381129-65380955 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 105, 35

Conread position: 180-514
Cow position: chr3:13118321-13117992 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 42

Conread position: 180-599
Cow position: chr3:43657726-43658159 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 286
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 146, 124

Conread position: 182-320
Cow position: chr3:59317493-59317626 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 8

Conread position: 183-613
Cow position: chr3:49455214-49454778 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 33

Conread position: 184-417
Cow position: chr3:8604043-8604272 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 95, 31

Conread position: 184-418
Cow position: chr3:45307911-45307675 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 166, 94

Conread position: 186-342
Cow position: chr3:16891285-16891118 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 186-553
Cow position: chr3:15661728-15662092 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 30

Conread position: 186-614
Cow position: chr3:7858344-7857898 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 356

Conread position: 188-342
Cow position: chr3:20779778-20779924 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 143, 21

Conread position: 188-462
Cow position: chr3:19198650-19198378 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 26, 47

Conread position: 190-438
Cow position: chr3:42588329-42588070 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 148

Conread position: 190-540
Cow position: chr3:35283120-35283466 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 39

Conread position: 192-338
Cow position: chr3:11043691-11043544 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 192-455
Cow position: chr3:25691718-25691452 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 14

Conread position: 193-359
Cow position: chr3:78739824-78739664 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 97

Conread position: 194-614
Cow position: chr3:82360008-82359567 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 23

Conread position: 196-608
Cow position: chr3:522667-522272 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 9

Conread position: 205-534
Cow position: chr3:22021018-22021346 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 70

Conread position: 205-614
Cow position: chr3:76188640-76188236 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 12

Conread position: 206-445
Cow position: chr3:11949398-11949639 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 76

Conread position: 206-511
Cow position: chr3:61361359-61361065 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 75, 13

Conread position: 207-507
Cow position: chr3:31903160-31903456 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 10

Conread position: 210-526
Cow position: chr3:48211441-48211142 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 32

Conread position: 217-441
Cow position: chr3:66116166-66116394 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 66, 79

Conread position: 218-396
Cow position: chr3:29334569-29334751 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 13

Conread position: 219-397
Cow position: chr3:4861626-4861451 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 26

Conread position: 219-614
Cow position: chr3:2483389-2483003 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 113

Conread position: 220-613
Cow position: chr3:22872105-22872504 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 338

Conread position: 226-369
Cow position: chr3:23265358-23265502 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 228-485
Cow position: chr3:73777218-73776947 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 173

Conread position: 228-526
Cow position: chr3:33632958-33633253 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 42

Conread position: 229-403
Cow position: chr3:35074614-35074437 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 10

Conread position: 229-415
Cow position: chr3:23270031-23269846 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 128

Conread position: 229-449
Cow position: chr3:56704611-56704827 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 69

Conread position: 229-452
Cow position: chr3:16809852-16810084 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 230-607
Cow position: chr3:23277611-23277991 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 24

Conread position: 234-424
Cow position: chr3:55971154-55970960 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 45, 65

Conread position: 234-450
Cow position: chr3:18855023-18854802 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 129

Conread position: 234-482
Cow position: chr3:34571330-34571075 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 231

Conread position: 234-549
Cow position: chr3:63945047-63945365 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 47, 78

Conread position: 239-614
Cow position: chr3:52691053-52690669 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 45, 59

Conread position: 239-614
Cow position: chr3:53904102-53903728 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 39

Conread position: 253-442
Cow position: chr3:66964391-66964576 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 122, 23

Conread position: 253-570
Cow position: chr3:48371044-48370720 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 52

Conread position: 253-614
Cow position: chr3:36656860-36657228 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 256-614
Cow position: chr3:53222733-53223103 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 265-517
Cow position: chr3:65020233-65019974 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 234

Conread position: 265-612
Cow position: chr3:61262699-61262368 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 39

Conread position: 268-582
Cow position: chr3:9116795-9116487 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 13

Conread position: 272-450
Cow position: chr3:49388729-49388551 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 62

Conread position: 272-519
Cow position: chr3:4040525-4040275 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 53, 46

Conread position: 278-503
Cow position: chr3:29310964-29311193 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 278-614
Cow position: chr3:3289672-3289336 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 18

Conread position: 278-614
Cow position: chr3:18245536-18245870 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 150

Conread position: 279-607
Cow position: chr3:12670814-12671143 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 15

Conread position: 280-612
Cow position: chr3:8901300-8900959 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 24

Conread position: 284-600
Cow position: chr3:6403176-6402856 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 62

Conread position: 286-614
Cow position: chr3:41947242-41947565 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 149

Conread position: 288-536
Cow position: chr3:39554447-39554690 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 75, 125

Conread position: 290-496
Cow position: chr3:48900630-48900839 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 97

Conread position: 296-534
Cow position: chr3:79691113-79690879 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 96

Conread position: 298-536
Cow position: chr3:38252856-38252619 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 73, 116

Conread position: 298-553
Cow position: chr3:34953522-34953260 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 46, 201

Conread position: 298-614
Cow position: chr3:5536042-5536363 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 168

Conread position: 298-614
Cow position: chr3:19109600-19109278 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 104

Conread position: 299-574
Cow position: chr3:40100808-40101086 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 33, 132

Conread position: 304-613
Cow position: chr3:83437248-83437556 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 305-440
Cow position: chr3:30907778-30907916 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 61, 86

Show alignments to all cow chromosomes.