Non-Coding RNA Search

Cow genome map


           Conread name:
           rpliv0131_d19.y1
        

               Conread position:
               1-114
               

               Cow position:
               chrX:42159155-42159037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-117
               

               Cow position:
               chrX:10479963-10479842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-122
               

               Cow position:
               chrX:1996238-1996364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-132
               

               Cow position:
               chrX:37717935-37717800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               89, 128
               

               Conread position:
               1-134
               

               Cow position:
               chrX:11670900-11670762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-136
               

               Cow position:
               chrX:26720477-26720608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               76, 14
               

               Conread position:
               1-136
               

               Cow position:
               chrX:42506733-42506875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-139
               

               Cow position:
               chrX:35509467-35509608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               1-140
               

               Cow position:
               chrX:3494837-3494975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               1-140
               

               Cow position:
               chrX:33678257-33678403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-142
               

               Cow position:
               chrX:11589154-11589299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               88, 46
               

               Conread position:
               1-143
               

               Cow position:
               chrX:9451554-9451412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 41
               

               Conread position:
               1-143
               

               Cow position:
               chrX:34193867-34194014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-143
               

               Cow position:
               chrX:45044667-45044519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-143
               

               Cow position:
               chrX:48574141-48574290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-147
               

               Cow position:
               chrX:41215536-41215385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-148
               

               Cow position:
               chrX:22552766-22552917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 17
               

               Conread position:
               1-151
               

               Cow position:
               chrX:26881866-26882021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-158
               

               Cow position:
               chrX:1101763-1101609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-159
               

               Cow position:
               chrX:16770278-16770115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-160
               

               Cow position:
               chrX:17298473-17298309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               75, 137
               

               Conread position:
               1-160
               

               Cow position:
               chrX:41363637-41363809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-160
               

               Cow position:
               chrX:48118523-48118683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               1-161
               

               Cow position:
               chrX:4602725-4602889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 136
               

               Conread position:
               1-161
               

               Cow position:
               chrX:10237700-10237864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               89, 82
               

               Conread position:
               1-161
               

               Cow position:
               chrX:19000340-19000175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-161
               

               Cow position:
               chrX:36568844-36569007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-161
               

               Cow position:
               chrX:37867467-37867302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-161
               

               Cow position:
               chrX:41166616-41166776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               68, 90
               

               Conread position:
               1-163
               

               Cow position:
               chrX:41011103-41010945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-166
               

               Cow position:
               chrX:6634558-6634388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-166
               

               Cow position:
               chrX:32215442-32215275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 146
               

               Conread position:
               1-166
               

               Cow position:
               chrX:42875422-42875256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               88, 69
               

               Conread position:
               1-166
               

               Cow position:
               chrX:44225517-44225687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1-166
               

               Cow position:
               chrX:45412030-45412195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               1-167
               

               Cow position:
               chrX:8759836-8759668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               89, 127
               

               Conread position:
               1-167
               

               Cow position:
               chrX:11517765-11517937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-167
               

               Cow position:
               chrX:31983365-31983542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-167
               

               Cow position:
               chrX:45843379-45843551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               64, 32
               

               Conread position:
               1-168
               

               Cow position:
               chrX:1938226-1938056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               89, 72
               

               Conread position:
               1-170
               

               Cow position:
               chrX:14951140-14951313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-170
               

               Cow position:
               chrX:27415375-27415540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-170
               

               Cow position:
               chrX:35409965-35409792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               89, 113
               

               Conread position:
               1-170
               

               Cow position:
               chrX:45759882-45759711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               1-172
               

               Cow position:
               chrX:876634-876804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 39
               

               Conread position:
               1-172
               

               Cow position:
               chrX:15545050-15545225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 155
               

               Conread position:
               1-172
               

               Cow position:
               chrX:16556010-16556179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-172
               

               Cow position:
               chrX:31986359-31986536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               1-173
               

               Cow position:
               chrX:6389292-6389117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               82, 126
               

               Conread position:
               1-173
               

               Cow position:
               chrX:37751898-37752069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               72, 46
               

               Conread position:
               1-173
               

               Cow position:
               chrX:41435329-41435512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-175
               

               Cow position:
               chrX:10279088-10278899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 16
               

               Conread position:
               1-176
               

               Cow position:
               chrX:1960212-1960391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               89, 56
               

               Conread position:
               1-176
               

               Cow position:
               chrX:5876316-5876141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               89, 42
               

               Conread position:
               1-176
               

               Cow position:
               chrX:35681780-35681602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               89, 74
               

               Conread position:
               1-177
               

               Cow position:
               chrX:17498536-17498355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-178
               

               Cow position:
               chrX:14925486-14925308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               89, 149
               

               Conread position:
               1-178
               

               Cow position:
               chrX:48822129-48822310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 74
               

               Conread position:
               1-179
               

               Cow position:
               chrX:47100381-47100567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               58, 83
               

               Conread position:
               1-180
               

               Cow position:
               chrX:4092135-4091954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               1-180
               

               Cow position:
               chrX:13347482-13347304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 118
               

               Conread position:
               1-180
               

               Cow position:
               chrX:25930853-25930667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               69, 32
               

               Conread position:
               1-180
               

               Cow position:
               chrX:30958941-30958756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               90, 14
               

               Conread position:
               1-180
               

               Cow position:
               chrX:37749779-37749953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-180
               

               Cow position:
               chrX:40649115-40648926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 173
               

               Conread position:
               1-181
               

               Cow position:
               chrX:11781460-11781282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               75, 92
               

               Conread position:
               1-181
               

               Cow position:
               chrX:34270774-34270592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               93, 45
               

               Conread position:
               1-182
               

               Cow position:
               chrX:5097581-5097771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               1-182
               

               Cow position:
               chrX:11674325-11674141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               1-182
               

               Cow position:
               chrX:46910021-46909843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               1-183
               

               Cow position:
               chrX:11813287-11813106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               86, 151
               

               Conread position:
               1-183
               

               Cow position:
               chrX:44995713-44995525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-186
               

               Cow position:
               chrX:51689-51872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               79, 144
               

               Conread position:
               1-186
               

               Cow position:
               chrX:16763717-16763903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               160, 67
               

               Conread position:
               1-186
               

               Cow position:
               chrX:36921928-36922118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               1-187
               

               Cow position:
               chrX:41454740-41454931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-188
               

               Cow position:
               chrX:34398570-34398762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-191
               

               Cow position:
               chrX:32877166-32877356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               1-194
               

               Cow position:
               chrX:31480179-31479987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               1-195
               

               Cow position:
               chrX:908154-907961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               51, 71
               

               Conread position:
               1-196
               

               Cow position:
               chrX:3494608-3494808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-196
               

               Cow position:
               chrX:20957452-20957252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-196
               

               Cow position:
               chrX:29467569-29467764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               77, 59
               

               Conread position:
               1-196
               

               Cow position:
               chrX:30824198-30824001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               1-197
               

               Cow position:
               chrX:47868426-47868221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-199
               

               Cow position:
               chrX:19356677-19356480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               89, 133
               

               Conread position:
               1-201
               

               Cow position:
               chrX:28837097-28836903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               1-202
               

               Cow position:
               chrX:16323802-16324006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 151
               

               Conread position:
               1-202
               

               Cow position:
               chrX:35285387-35285181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-204
               

               Cow position:
               chrX:19018615-19018825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-204
               

               Cow position:
               chrX:38302027-38301815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-204
               

               Cow position:
               chrX:41809962-41810161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-206
               

               Cow position:
               chrX:4559947-4559743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               84, 148
               

               Conread position:
               1-207
               

               Cow position:
               chrX:17524170-17524381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-207
               

               Cow position:
               chrX:31744802-31745002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               60, 46
               

               Conread position:
               1-207
               

               Cow position:
               chrX:38968108-38967891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               72, 144
               

               Conread position:
               1-208
               

               Cow position:
               chrX:35390550-35390737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-210
               

               Cow position:
               chrX:14985949-14986151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               71, 41
               

               Conread position:
               1-211
               

               Cow position:
               chrX:37856574-37856351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-212
               

               Cow position:
               chrX:29451332-29451544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               79, 178
               

               Conread position:
               1-212
               

               Cow position:
               chrX:32910310-32910102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               89, 57
               

               Conread position:
               1-212
               

               Cow position:
               chrX:42480040-42479831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               21, 16
               

               Conread position:
               1-213
               

               Cow position:
               chrX:23335762-23335975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               89, 151
               

               Conread position:
               1-213
               

               Cow position:
               chrX:27074838-27075054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               89, 63
               

               Conread position:
               1-213
               

               Cow position:
               chrX:29478935-29478721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 66
               

               Conread position:
               1-213
               

               Cow position:
               chrX:42331486-42331275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               171, 14
               

               Conread position:
               1-214
               

               Cow position:
               chrX:3806891-3806678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 51
               

               Conread position:
               1-214
               

               Cow position:
               chrX:11653980-11653760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               1-214
               

               Cow position:
               chrX:24054874-24054667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               1-214
               

               Cow position:
               chrX:35278524-35278326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-215
               

               Cow position:
               chrX:38587632-38587848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               1-218
               

               Cow position:
               chrX:1553183-1552961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-218
               

               Cow position:
               chrX:4467164-4466959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-219
               

               Cow position:
               chrX:26979578-26979799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               1-219
               

               Cow position:
               chrX:43008823-43008599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               88, 206
               

               Conread position:
               1-220
               

               Cow position:
               chrX:47345543-47345318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 197
               

               Conread position:
               1-225
               

               Cow position:
               chrX:16836081-16836301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-228
               

               Cow position:
               chrX:35276199-35275969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 185
               

               Conread position:
               1-229
               

               Cow position:
               chrX:42282790-42282559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               88, 124
               

               Conread position:
               1-229
               

               Cow position:
               chrX:42449800-42450033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-232
               

               Cow position:
               chrX:42836394-42836164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               1-233
               

               Cow position:
               chrX:25412132-25411886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               1-236
               

               Cow position:
               chrX:1087935-1088167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               1-244
               

               Cow position:
               chrX:36391975-36392220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               78, 125
               

               Conread position:
               1-244
               

               Cow position:
               chrX:41941836-41941594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 43
               

               Conread position:
               1-246
               

               Cow position:
               chrX:19394768-19394518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               91, 74
               

               Conread position:
               1-246
               

               Cow position:
               chrX:44834441-44834686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 110
               

               Conread position:
               1-246
               

               Cow position:
               chrX:47358527-47358273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 237
               

               Conread position:
               1-247
               

               Cow position:
               chrX:17956902-17956660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 55
               

               Conread position:
               1-247
               

               Cow position:
               chrX:28940457-28940211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               89, 66
               

               Conread position:
               1-247
               

               Cow position:
               chrX:42894135-42893882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               91, 62
               

               Conread position:
               1-247
               

               Cow position:
               chrX:48558959-48558712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               89, 34
               

               Conread position:
               1-251
               

               Cow position:
               chrX:43150644-43150381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-253
               

               Cow position:
               chrX:35431028-35431285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               99, 86
               

               Conread position:
               1-257
               

               Cow position:
               chrX:4645701-4645957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               1-258
               

               Cow position:
               chrX:19660241-19660509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               68, 220
               

               Conread position:
               1-259
               

               Cow position:
               chrX:36367721-36367989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 227
               

               Conread position:
               1-267
               

               Cow position:
               chrX:44339108-44339379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               1-269
               

               Cow position:
               chrX:19469302-19469563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               62, 83
               

               Conread position:
               1-273
               

               Cow position:
               chrX:296605-296334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               86, 158
               

               Conread position:
               1-273
               

               Cow position:
               chrX:4109398-4109129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 194
               

               Conread position:
               1-273
               

               Cow position:
               chrX:7648199-7648462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 100
               

               Conread position:
               1-278
               

               Cow position:
               chrX:5063449-5063187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-280
               

               Cow position:
               chrX:13122157-13121862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-289
               

               Cow position:
               chrX:4152831-4153113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               214, 69
               

               Conread position:
               1-290
               

               Cow position:
               chrX:36866386-36866092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 109
               

               Conread position:
               1-294
               

               Cow position:
               chrX:22115101-22115401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               22, 83
               

               Conread position:
               1-298
               

               Cow position:
               chrX:6559243-6559532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               278, 108
               

               Conread position:
               1-299
               

               Cow position:
               chrX:20881748-20882025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 56
               

               Conread position:
               1-299
               

               Cow position:
               chrX:40680828-40680523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-302
               

               Cow position:
               chrX:1466376-1466070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               30, 214
               

               Conread position:
               1-302
               

               Cow position:
               chrX:40337124-40336808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               1-303
               

               Cow position:
               chrX:25282801-25283106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               102, 156
               

               Conread position:
               1-304
               

               Cow position:
               chrX:42855676-42855362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 214
               

               Conread position:
               1-306
               

               Cow position:
               chrX:27261403-27261093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 16
               

               Conread position:
               1-308
               

               Cow position:
               chrX:12095558-12095870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 216
               

               Conread position:
               1-308
               

               Cow position:
               chrX:20168768-20168461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 14
               

               Conread position:
               1-308
               

               Cow position:
               chrX:34836859-34837150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-311
               

               Cow position:
               chrX:23113505-23113176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               33, 83
               

               Conread position:
               1-313
               

               Cow position:
               chrX:13924074-13923770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               89, 57
               

               Conread position:
               1-313
               

               Cow position:
               chrX:21328127-21327802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-317
               

               Cow position:
               chrX:24457334-24457647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 231
               

               Conread position:
               1-317
               

               Cow position:
               chrX:47657606-47657279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               39, 132
               

               Conread position:
               1-318
               

               Cow position:
               chrX:10516467-10516151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 275
               

               Conread position:
               1-324
               

               Cow position:
               chrX:9650814-9651137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               72, 257
               

               Conread position:
               1-324
               

               Cow position:
               chrX:38654219-38654542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               73, 142
               

               Conread position:
               1-328
               

               Cow position:
               chrX:24331990-24331662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 205
               

               Conread position:
               1-332
               

               Cow position:
               chrX:4403531-4403194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 217
               

               Conread position:
               1-337
               

               Cow position:
               chrX:33654630-33654972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 213
               

               Conread position:
               1-337
               

               Cow position:
               chrX:34504840-34505172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               132, 95
               

               Conread position:
               1-342
               

               Cow position:
               chrX:20584525-20584193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 62
               

               Conread position:
               1-342
               

               Cow position:
               chrX:30840754-30840426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               162, 89
               

               Conread position:
               1-342
               

               Cow position:
               chrX:40685116-40685461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               89, 69
               

               Conread position:
               1-342
               

               Cow position:
               chrX:45875603-45875261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               1-347
               

               Cow position:
               chrX:15231446-15231789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               69, 231
               

               Conread position:
               1-347
               

               Cow position:
               chrX:18204253-18204598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 30
               

               Conread position:
               1-347
               

               Cow position:
               chrX:41027373-41027022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 304
               

               Conread position:
               1-355
               

               Cow position:
               chrX:43050283-43049916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               78, 49
               

               Conread position:
               1-356
               

               Cow position:
               chrX:4278906-4279255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               1-356
               

               Cow position:
               chrX:8917608-8917252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 207
               

               Conread position:
               1-356
               

               Cow position:
               chrX:29723964-29723597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 220
               

               Conread position:
               1-356
               

               Cow position:
               chrX:34314234-34313889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 180
               

               Conread position:
               1-361
               

               Cow position:
               chrX:34315740-34315376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               33, 261
               

               Conread position:
               1-363
               

               Cow position:
               chrX:26493420-26493786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               67, 310
               

               Conread position:
               1-366
               

               Cow position:
               chrX:5679717-5680085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               89, 149
               

               Conread position:
               1-367
               

               Cow position:
               chrX:35822544-35822187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               1-373
               

               Cow position:
               chrX:27228342-27227962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 213
               

               Conread position:
               1-379
               

               Cow position:
               chrX:25207648-25208017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 67
               

               Conread position:
               1-380
               

               Cow position:
               chrX:4399331-4398954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 69
               

               Conread position:
               1-380
               

               Cow position:
               chrX:6407757-6407377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 140
               

               Conread position:
               1-380
               

               Cow position:
               chrX:37956058-37955666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               1-382
               

               Cow position:
               chrX:34792110-34792484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 14
               

               Conread position:
               1-383
               

               Cow position:
               chrX:21986088-21986464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               71, 83
               

               Conread position:
               1-385
               

               Cow position:
               chrX:22387030-22387423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               1-391
               

               Cow position:
               chrX:32821253-32820847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 179
               

               Conread position:
               1-394
               

               Cow position:
               chrX:35382829-35383205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               335, 81
               

               Conread position:
               1-401
               

               Cow position:
               chrX:8869191-8869601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 300
               

               Conread position:
               1-406
               

               Cow position:
               chrX:33001111-33000706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 63
               

               Conread position:
               1-411
               

               Cow position:
               chrX:36356317-36355921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 66
               

               Conread position:
               1-413
               

               Cow position:
               chrX:29544673-29545084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 19
               

               Conread position:
               1-415
               

               Cow position:
               chrX:46588033-46587611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 43
               

               Conread position:
               1-418
               

               Cow position:
               chrX:9425549-9425951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               1-419
               

               Cow position:
               chrX:27175213-27174785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 166
               

               Conread position:
               1-420
               

               Cow position:
               chrX:3580158-3579735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 220
               

               Conread position:
               1-420
               

               Cow position:
               chrX:29542015-29542430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 79
               

               Conread position:
               1-425
               

               Cow position:
               chrX:40567818-40567383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               310
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               74, 63
               

               Conread position:
               1-426
               

               Cow position:
               chrX:37780899-37781330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 28
               

               Conread position:
               1-429
               

               Cow position:
               chrX:36283553-36283125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 215
               

               Conread position:
               1-430
               

               Cow position:
               chrX:11633895-11633457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-431
               

               Cow position:
               chrX:1503520-1503117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 51
               

               Conread position:
               1-431
               

               Cow position:
               chrX:12979622-12980053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               1-431
               

               Cow position:
               chrX:46072617-46073044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 69
               

               Conread position:
               1-432
               

               Cow position:
               chrX:6488778-6488363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 100
               

               Conread position:
               1-434
               

               Cow position:
               chrX:28013227-28013665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 19
               

               Conread position:
               1-439
               

               Cow position:
               chrX:42380899-42381330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               1-441
               

               Cow position:
               chrX:17231950-17231502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 337
               

               Conread position:
               1-441
               

               Cow position:
               chrX:38642455-38642028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 26
               

               Conread position:
               1-443
               

               Cow position:
               chrX:30962662-30963106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 206
               

               Conread position:
               1-443
               

               Cow position:
               chrX:37119788-37119365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 66
               

               Conread position:
               1-445
               

               Cow position:
               chrX:34543999-34543551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 236
               

               Conread position:
               1-445
               

               Cow position:
               chrX:38549659-38549212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 48
               

               Conread position:
               1-445
               

               Cow position:
               chrX:39938325-39938753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               334, 55
               

               Conread position:
               1-445
               

               Cow position:
               chrX:42011474-42011044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               308
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               201, 51
               

               Conread position:
               1-445
               

               Cow position:
               chrX:47248584-47249024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               139, 57
               

               Conread position:
               1-446
               

               Cow position:
               chrX:11938740-11939161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 62
               

               Conread position:
               1-446
               

               Cow position:
               chrX:32420424-32419973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               1-446
               

               Cow position:
               chrX:45598395-45598841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               1-447
               

               Cow position:
               chrX:4768941-4768512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 56
               

               Conread position:
               1-458
               

               Cow position:
               chrX:7722187-7721736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 14
               

               Conread position:
               1-461
               

               Cow position:
               chrX:23497484-23497915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 49
               

               Conread position:
               1-463
               

               Cow position:
               chrX:24365609-24366083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 120
               

               Conread position:
               1-463
               

               Cow position:
               chrX:25815686-25816150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 237
               

               Conread position:
               1-463
               

               Cow position:
               chrX:28877953-28878416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 220
               

               Conread position:
               1-463
               

               Cow position:
               chrX:41674310-41673849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               1-468
               

               Cow position:
               chrX:20152061-20151591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 85
               

               Conread position:
               1-471
               

               Cow position:
               chrX:27431711-27432180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               1-477
               

               Cow position:
               chrX:8925893-8925438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 69
               

               Conread position:
               1-480
               

               Cow position:
               chrX:27508811-27509292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 133
               

               Conread position:
               1-488
               

               Cow position:
               chrX:16762981-16762493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 67
               

               Conread position:
               1-499
               

               Cow position:
               chrX:4268857-4269357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 51
               

               Conread position:
               1-500
               

               Cow position:
               chrX:6674722-6675216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               339
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               212, 55
               

               Conread position:
               1-502
               

               Cow position:
               chrX:22482476-22482982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 238
               

               Conread position:
               1-508
               

               Cow position:
               chrX:1175777-1176273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 42
               

               Conread position:
               1-511
               

               Cow position:
               chrX:30133111-30133626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               1-515
               

               Cow position:
               chrX:33466835-33466311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               540
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               1-519
               

               Cow position:
               chrX:7351514-7350992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 14
               

               Conread position:
               1-523
               

               Cow position:
               chrX:41238149-41238674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               548
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               1-524
               

               Cow position:
               chrX:25713988-25713494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               534
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 51
               

               Conread position:
               1-534
               

               Cow position:
               chrX:5637966-5638493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 62
               

               Conread position:
               1-535
               

               Cow position:
               chrX:26493220-26492676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 216
               

               Conread position:
               1-541
               

               Cow position:
               chrX:15546094-15545565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               1-548
               

               Cow position:
               chrX:43115362-43114833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 61
               

               Conread position:
               1-551
               

               Cow position:
               chrX:40557445-40558018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 323
               

               Conread position:
               1-557
               

               Cow position:
               chrX:31436682-31436132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               560
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 67
               

               Conread position:
               1-557
               

               Cow position:
               chrX:31442626-31443169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               562
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 82
               

               Conread position:
               1-559
               

               Cow position:
               chrX:42492308-42492880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               586
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 216
               

               Conread position:
               1-570
               

               Cow position:
               chrX:5118285-5118844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 82
               

               Conread position:
               1-587
               

               Cow position:
               chrX:33855013-33855618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               612
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               1-588
               

               Cow position:
               chrX:25035168-25035765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               606
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 219
               

               Conread position:
               1-597
               

               Cow position:
               chrX:37489942-37489330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               626
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 109
               

               Conread position:
               1-597
               

               Cow position:
               chrX:41526321-41526906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               605
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 28
               

               Conread position:
               1-599
               

               Cow position:
               chrX:38218926-38218328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 60
               

               Conread position:
               1-601
               

               Cow position:
               chrX:7695976-7695372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 161
               

               Conread position:
               1-601
               

               Cow position:
               chrX:14973544-14974127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               611
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 82
               

               Conread position:
               1-601
               

               Cow position:
               chrX:37072599-37072014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 197
               

               Conread position:
               1-602
               

               Cow position:
               chrX:5872545-5871920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 231
               

               Conread position:
               1-608
               

               Cow position:
               chrX:45429817-45430418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               615
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 77
               

               Conread position:
               1-609
               

               Cow position:
               chrX:152118-151503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 156
               

               Conread position:
               1-609
               

               Cow position:
               chrX:42246968-42247574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 294
               

               Conread position:
               1-610
               

               Cow position:
               chrX:15146986-15147582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 19
               

               Conread position:
               1-611
               

               Cow position:
               chrX:10831268-10831914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 124
               

               Conread position:
               1-612
               

               Cow position:
               chrX:11656291-11655674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 62
               

               Conread position:
               1-612
               

               Cow position:
               chrX:38094313-38094928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               1-612
               

               Cow position:
               chrX:38964310-38963710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               619
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 48
               

               Conread position:
               1-613
               

               Cow position:
               chrX:27446896-27446287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               631
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 48
               

               Conread position:
               1-613
               

               Cow position:
               chrX:31260412-31261041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 12
               

               Conread position:
               1-613
               

               Cow position:
               chrX:34441240-34441851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 165
               

               Conread position:
               1-614
               

               Cow position:
               chrX:161613-161023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               619
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               1-614
               

               Cow position:
               chrX:1615845-1616462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               632
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 46
               

               Conread position:
               1-614
               

               Cow position:
               chrX:4632641-4633262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 213
               

               Conread position:
               1-614
               

               Cow position:
               chrX:6544458-6543851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               619
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 79
               

               Conread position:
               1-614
               

               Cow position:
               chrX:8900232-8899620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 133
               

               Conread position:
               1-614
               

               Cow position:
               chrX:10865657-10866272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               629
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 171
               

               Conread position:
               1-614
               

               Cow position:
               chrX:12250028-12249396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 46
               

               Conread position:
               1-614
               

               Cow position:
               chrX:12290931-12290332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               622
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 57
               

               Conread position:
               1-614
               

               Cow position:
               chrX:13177271-13177865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               631
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               1-614
               

               Cow position:
               chrX:15006946-15007556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               619
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 50
               

               Conread position:
               1-614
               

               Cow position:
               chrX:20339682-20340294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               626
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 16
               

               Conread position:
               1-614
               

               Cow position:
               chrX:21593504-21592881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               1-614
               

               Cow position:
               chrX:23563577-23564202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 229
               

               Conread position:
               1-614
               

               Cow position:
               chrX:27442325-27442957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 352
               

               Conread position:
               1-614
               

               Cow position:
               chrX:27705800-27705188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 35
               

               Conread position:
               1-614
               

               Cow position:
               chrX:31489734-31489107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               632
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 243
               

               Conread position:
               1-614
               

               Cow position:
               chrX:31729650-31729053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 62
               

               Conread position:
               1-614
               

               Cow position:
               chrX:34554937-34554330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 200
               

               Conread position:
               1-614
               

               Cow position:
               chrX:40826537-40827150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 203
               

               Conread position:
               1-614
               

               Cow position:
               chrX:41123258-41122666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               1-614
               

               Cow position:
               chrX:41878724-41879335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               1-614
               

               Cow position:
               chrX:42587209-42587834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 92
               

               Conread position:
               1-614
               

               Cow position:
               chrX:44055016-44054399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               629
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 210
               

               Conread position:
               1-614
               

               Cow position:
               chrX:44192229-44192847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 338
               

               Conread position:
               1-614
               

               Cow position:
               chrX:46532277-46532925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 433
               

               Conread position:
               2-147
               

               Cow position:
               chrX:16801055-16801200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               87, 18
               

               Conread position:
               2-155
               

               Cow position:
               chrX:41199434-41199279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               88, 60
               

               Conread position:
               2-160
               

               Cow position:
               chrX:37867645-37867481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               2-167
               

               Cow position:
               chrX:42760465-42760295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               2-178
               

               Cow position:
               chrX:36722601-36722773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               2-180
               

               Cow position:
               chrX:2551289-2551121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               135, 55
               

               Conread position:
               2-181
               

               Cow position:
               chrX:7910860-7911043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               57, 50
               

               Conread position:
               2-186
               

               Cow position:
               chrX:8642257-8642070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               88, 126
               

               Conread position:
               2-188
               

               Cow position:
               chrX:28068063-28067872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               2-194
               

               Cow position:
               chrX:20583872-20583682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               76, 13
               

               Conread position:
               2-203
               

               Cow position:
               chrX:19717723-19717529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               2-207
               

               Cow position:
               chrX:18873049-18873266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               2-209
               

               Cow position:
               chrX:4327970-4328182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               2-211
               

               Cow position:
               chrX:34420948-34420733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               2-212
               

               Cow position:
               chrX:16984847-16984639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 63
               

               Conread position:
               2-212
               

               Cow position:
               chrX:46069973-46070174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               115, 60
               

               Conread position:
               2-213
               

               Cow position:
               chrX:21665024-21665244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               2-213
               

               Cow position:
               chrX:39290567-39290356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 74
               

               Conread position:
               2-214
               

               Cow position:
               chrX:30672172-30672400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               2-224
               

               Cow position:
               chrX:24170513-24170743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               72, 123
               

               Conread position:
               2-224
               

               Cow position:
               chrX:44040389-44040163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               88, 158
               

               Conread position:
               2-228
               

               Cow position:
               chrX:11762799-11763022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               70, 82
               

               Conread position:
               2-232
               

               Cow position:
               chrX:26843054-26843288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               51, 221
               

               Conread position:
               2-239
               

               Cow position:
               chrX:32318512-32318276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               156, 20
               

               Conread position:
               2-246
               

               Cow position:
               chrX:11325896-11326134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               70, 81
               

               Conread position:
               2-270
               

               Cow position:
               chrX:1360294-1360028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 66
               

               Conread position:
               2-272
               

               Cow position:
               chrX:126968-126709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               210, 80
               

               Conread position:
               2-272
               

               Cow position:
               chrX:39352984-39352720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               174, 68
               

               Conread position:
               2-273
               

               Cow position:
               chrX:25037204-25036926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               67, 217
               

               Conread position:
               2-273
               

               Cow position:
               chrX:44702853-44703133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               88, 211
               

               Conread position:
               2-278
               

               Cow position:
               chrX:15820818-15820531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               71, 18
               

               Conread position:
               2-280
               

               Cow position:
               chrX:2674745-2675025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               83, 147
               

               Conread position:
               2-301
               

               Cow position:
               chrX:31515383-31515079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 256
               

               Conread position:
               2-309
               

               Cow position:
               chrX:10829647-10829335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               73, 220
               

               Conread position:
               2-349
               

               Cow position:
               chrX:34222926-34222577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 74
               

               Conread position:
               2-356
               

               Cow position:
               chrX:18486015-18485654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               86, 224
               

               Conread position:
               2-378
               

               Cow position:
               chrX:35885520-35885899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 61
               

               Conread position:
               2-410
               

               Cow position:
               chrX:1499866-1499468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 69
               

               Conread position:
               2-416
               

               Cow position:
               chrX:4825636-4826035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               65, 69
               

               Conread position:
               2-427
               

               Cow position:
               chrX:48237028-48236593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 125
               

               Conread position:
               2-429
               

               Cow position:
               chrX:29601617-29602053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 68
               

               Conread position:
               2-443
               

               Cow position:
               chrX:27393806-27394248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               2-445
               

               Cow position:
               chrX:22624672-22624245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 49
               

               Conread position:
               2-445
               

               Cow position:
               chrX:44961967-44961511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 332
               

               Conread position:
               2-469
               

               Cow position:
               chrX:9634980-9635439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 19
               

               Conread position:
               2-488
               

               Cow position:
               chrX:8731306-8730800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 152
               

               Conread position:
               2-612
               

               Cow position:
               chrX:34377151-34376551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 70
               

               Conread position:
               2-613
               

               Cow position:
               chrX:12309173-12309790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               626
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 213
               

               Conread position:
               2-614
               

               Cow position:
               chrX:12437071-12437640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               613
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-614
               

               Cow position:
               chrX:28632270-28632882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 211
               

               Conread position:
               2-614
               

               Cow position:
               chrX:28846680-28847287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               629
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 141
               

               Conread position:
               2-614
               

               Cow position:
               chrX:34238935-34238315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               629
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 278
               

               Conread position:
               2-614
               

               Cow position:
               chrX:34565497-34564895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               622
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 50
               

               Conread position:
               2-614
               

               Cow position:
               chrX:35269068-35268488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 18
               

               Conread position:
               3-159
               

               Cow position:
               chrX:25048891-25049049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               3-160
               

               Cow position:
               chrX:1121155-1121317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               3-162
               

               Cow position:
               chrX:25925445-25925594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               3-166
               

               Cow position:
               chrX:18030205-18030373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               3-167
               

               Cow position:
               chrX:15222970-15223133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 14
               

               Conread position:
               3-172
               

               Cow position:
               chrX:13144658-13144484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               3-179
               

               Cow position:
               chrX:18439208-18439027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               3-179
               

               Cow position:
               chrX:39427087-39427268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               3-181
               

               Cow position:
               chrX:2314407-2314590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               3-181
               

               Cow position:
               chrX:13370127-13369944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               3-182
               

               Cow position:
               chrX:32190961-32191145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               3-190
               

               Cow position:
               chrX:42050058-42050249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               82, 181
               

               Conread position:
               3-191
               

               Cow position:
               chrX:3507775-3507580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 55
               

               Conread position:
               3-196
               

               Cow position:
               chrX:40574732-40574928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               82, 66
               

               Conread position:
               3-205
               

               Cow position:
               chrX:1122336-1122538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               85, 8
               

               Conread position:
               3-205
               

               Cow position:
               chrX:46068552-46068754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               70, 80
               

               Conread position:
               3-213
               

               Cow position:
               chrX:27145810-27145601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-214
               

               Cow position:
               chrX:25845862-25846077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               3-220
               

               Cow position:
               chrX:45139720-45139943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               3-229
               

               Cow position:
               chrX:17293167-17292935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               3-229
               

               Cow position:
               chrX:42432303-42432529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               3-231
               

               Cow position:
               chrX:48019920-48020136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               3-246
               

               Cow position:
               chrX:6599563-6599818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 231
               

               Conread position:
               3-246
               

               Cow position:
               chrX:12219357-12219118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               82, 165
               

               Conread position:
               3-246
               

               Cow position:
               chrX:44091134-44090888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               82, 229
               

               Conread position:
               3-246
               

               Cow position:
               chrX:48198437-48198681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               3-246
               

               Cow position:
               chrX:48574858-48574612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               82, 229
               

               Conread position:
               3-299
               

               Cow position:
               chrX:10859102-10859386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               82, 55
               

               Conread position:
               3-300
               

               Cow position:
               chrX:48071373-48071072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               82, 229
               

               Conread position:
               3-308
               

               Cow position:
               chrX:4296613-4296916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 200
               

               Conread position:
               3-314
               

               Cow position:
               chrX:22284050-22283731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               66, 138
               

               Conread position:
               3-339
               

               Cow position:
               chrX:17949281-17949617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 184
               

               Conread position:
               3-356
               

               Cow position:
               chrX:47279725-47280076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               72, 93
               

               Conread position:
               3-358
               

               Cow position:
               chrX:39415179-39415516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               275, 15
               

               Conread position:
               3-365
               

               Cow position:
               chrX:46546662-46547030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               15, 229
               

               Conread position:
               3-374
               

               Cow position:
               chrX:869971-870328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 146
               

               Conread position:
               3-379
               

               Cow position:
               chrX:22921532-22921143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 110
               

               Conread position:
               3-409
               

               Cow position:
               chrX:43779654-43780053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               3-415
               

               Cow position:
               chrX:16996705-16996300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 233
               

               Conread position:
               3-417
               

               Cow position:
               chrX:38853422-38852988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 160
               

               Conread position:
               3-420
               

               Cow position:
               chrX:842366-841947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               3-441
               

               Cow position:
               chrX:36976163-36975717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 174
               

               Conread position:
               3-443
               

               Cow position:
               chrX:27515070-27514634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 212
               

               Conread position:
               3-443
               

               Cow position:
               chrX:32330382-32329927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 160
               

               Conread position:
               3-445
               

               Cow position:
               chrX:45449121-45448651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               310
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               66, 264
               

               Conread position:
               3-446
               

               Cow position:
               chrX:9361095-9360646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 110
               

               Conread position:
               3-450
               

               Cow position:
               chrX:21663506-21663068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 216
               

               Conread position:
               3-467
               

               Cow position:
               chrX:32019922-32020380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 184
               

               Conread position:
               3-482
               

               Cow position:
               chrX:40183143-40183623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 200
               

               Conread position:
               3-541
               

               Cow position:
               chrX:7646447-7645925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 49
               

               Conread position:
               3-557
               

               Cow position:
               chrX:44397222-44396672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 127
               

               Conread position:
               3-573
               

               Cow position:
               chrX:47344510-47343928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 279
               

               Conread position:
               3-608
               

               Cow position:
               chrX:40035228-40035868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 171
               

               Conread position:
               3-610
               

               Cow position:
               chrX:9251952-9252572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               632
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 66
               

               Conread position:
               3-611
               

               Cow position:
               chrX:13868915-13868295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 79
               

               Conread position:
               3-612
               

               Cow position:
               chrX:14883746-14884365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 60
               

               Conread position:
               3-612
               

               Cow position:
               chrX:20887438-20888047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 9
               

               Conread position:
               3-614
               

               Cow position:
               chrX:47210625-47211257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 256
               

               Conread position:
               4-184
               

               Cow position:
               chrX:31250684-31250869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               81, 178
               

               Conread position:
               4-207
               

               Cow position:
               chrX:25049071-25049279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               4-214
               

               Cow position:
               chrX:48118243-48118457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               4-240
               

               Cow position:
               chrX:48659436-48659674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               88, 221
               

               Conread position:
               4-246
               

               Cow position:
               chrX:44590851-44591096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               81, 228
               

               Conread position:
               4-246
               

               Cow position:
               chrX:48194681-48194925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               83, 225
               

               Conread position:
               4-262
               

               Cow position:
               chrX:11825433-11825690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               84, 228
               

               Conread position:
               4-278
               

               Cow position:
               chrX:40108303-40108582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               50, 220
               

               Conread position:
               4-279
               

               Cow position:
               chrX:48004056-48003780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               89, 210
               

               Conread position:
               4-329
               

               Cow position:
               chrX:44744612-44744934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               277, 145
               

               Conread position:
               4-334
               

               Cow position:
               chrX:40320617-40320283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 226
               

               Conread position:
               4-335
               

               Cow position:
               chrX:18111589-18111267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 219
               

               Conread position:
               4-355
               

               Cow position:
               chrX:48646399-48646743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               4-439
               

               Cow position:
               chrX:35543094-35542661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 80
               

               Conread position:
               4-477
               

               Cow position:
               chrX:30922382-30921917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 195
               

               Conread position:
               4-537
               

               Cow position:
               chrX:34454869-34454346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 200
               

               Conread position:
               4-579
               

               Cow position:
               chrX:31250600-31250022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 227
               

               Conread position:
               4-614
               

               Cow position:
               chrX:15485423-15486030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 218
               

               Conread position:
               5-166
               

               Cow position:
               chrX:28850927-28850771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               5-166
               

               Cow position:
               chrX:36468159-36468324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               82, 151
               

               Conread position:
               5-172
               

               Cow position:
               chrX:13322143-13321972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               5-176
               

               Cow position:
               chrX:11454383-11454220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               5-179
               

               Cow position:
               chrX:19795300-19795472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               127, 47
               

               Conread position:
               5-187
               

               Cow position:
               chrX:597269-597448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               85, 116
               

               Conread position:
               5-191
               

               Cow position:
               chrX:33020647-33020457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               5-207
               

               Cow position:
               chrX:24335867-24336074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               5-214
               

               Cow position:
               chrX:6007884-6007671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               5-224
               

               Cow position:
               chrX:36109405-36109633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               5-228
               

               Cow position:
               chrX:47255658-47255430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               5-238
               

               Cow position:
               chrX:45403336-45403572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 71
               

               Conread position:
               5-245
               

               Cow position:
               chrX:34540892-34540646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 227
               

               Conread position:
               5-246
               

               Cow position:
               chrX:44201836-44202081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               80, 220
               

               Conread position:
               5-246
               

               Cow position:
               chrX:44796593-44796348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               82, 228
               

               Conread position:
               5-246
               

               Cow position:
               chrX:44837474-44837230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 222
               

               Conread position:
               5-246
               

               Cow position:
               chrX:44859653-44859897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               87, 220
               

               Conread position:
               5-246
               

               Cow position:
               chrX:44954703-44954458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               80, 209
               

               Conread position:
               5-246
               

               Cow position:
               chrX:45005166-45005409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               80, 221
               

               Conread position:
               5-246
               

               Cow position:
               chrX:45391504-45391748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               80, 216
               

               Conread position:
               5-246
               

               Cow position:
               chrX:45447466-45447221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               72, 228
               

               Conread position:
               5-246
               

               Cow position:
               chrX:46722380-46722624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               5-246
               

               Cow position:
               chrX:48474118-48473873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               61, 228
               

               Conread position:
               5-296
               

               Cow position:
               chrX:25463903-25464181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               77, 216
               

               Conread position:
               5-297
               

               Cow position:
               chrX:35590549-35590843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               101, 218
               

               Conread position:
               5-314
               

               Cow position:
               chrX:29938300-29937985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               84, 39
               

               Conread position:
               5-317
               

               Cow position:
               chrX:46022984-46022683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               82, 156
               

               Conread position:
               5-338
               

               Cow position:
               chrX:47609999-47609680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               82, 142
               

               Conread position:
               5-349
               

               Cow position:
               chrX:36393132-36393484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 134
               

               Conread position:
               5-404
               

               Cow position:
               chrX:7863371-7863768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               72, 202
               

               Conread position:
               5-434
               

               Cow position:
               chrX:21642272-21642703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 216
               

               Conread position:
               5-455
               

               Cow position:
               chrX:22822264-22821800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 226
               

               Conread position:
               5-497
               

               Cow position:
               chrX:31294360-31294828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 212
               

               Conread position:
               5-593
               

               Cow position:
               chrX:15597237-15596661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               604
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 211
               

               Conread position:
               5-593
               

               Cow position:
               chrX:41790218-41790821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 221
               

               Conread position:
               5-599
               

               Cow position:
               chrX:31948725-31949320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               605
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 270
               

               Conread position:
               5-614
               

               Cow position:
               chrX:17795189-17794590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 250
               

               Conread position:
               5-614
               

               Cow position:
               chrX:22813274-22812657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               629
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 180
               

               Conread position:
               5-614
               

               Cow position:
               chrX:47873127-47873738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 71
               

               Conread position:
               6-180
               

               Cow position:
               chrX:27416303-27416122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               61, 135
               

               Conread position:
               6-187
               

               Cow position:
               chrX:24425793-24425979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               6-205
               

               Cow position:
               chrX:19761957-19761759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               84, 56
               

               Conread position:
               6-246
               

               Cow position:
               chrX:47013193-47013437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 227
               

               Conread position:
               6-246
               

               Cow position:
               chrX:48397618-48397862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 227
               

               Conread position:
               6-246
               

               Cow position:
               chrX:48532522-48532280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               6-369
               

               Cow position:
               chrX:41068928-41068570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 84
               

               Conread position:
               6-385
               

               Cow position:
               chrX:47165676-47166061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 199
               

               Conread position:
               6-387
               

               Cow position:
               chrX:36061367-36060973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 109
               

               Conread position:
               6-445
               

               Cow position:
               chrX:38935487-38935045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 98
               

               Conread position:
               6-455
               

               Cow position:
               chrX:25570796-25571244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               205, 47
               

               Conread position:
               6-560
               

               Cow position:
               chrX:46770754-46771322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 209
               

               Conread position:
               7-214
               

               Cow position:
               chrX:8493274-8493062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               78, 200
               

               Conread position:
               7-247
               

               Cow position:
               chrX:48120998-48121234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               7-272
               

               Cow position:
               chrX:27511628-27511367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               85, 45
               

               Conread position:
               8-155
               

               Cow position:
               chrX:28107052-28106902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               77, 50
               

               Conread position:
               8-303
               

               Cow position:
               chrX:13147186-13146891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               69, 116
               

               Conread position:
               8-311
               

               Cow position:
               chrX:47246553-47246846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 139
               

               Conread position:
               8-445
               

               Cow position:
               chrX:23513801-23514254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 163
               

               Conread position:
               9-159
               

               Cow position:
               chrX:1396322-1396167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               9-172
               

               Cow position:
               chrX:6878529-6878701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               9-195
               

               Cow position:
               chrX:24105045-24104854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               9-213
               

               Cow position:
               chrX:35620910-35620700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               9-215
               

               Cow position:
               chrX:5512411-5512621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               9-242
               

               Cow position:
               chrX:43151950-43152187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               73, 198
               

               Conread position:
               9-246
               

               Cow position:
               chrX:44238557-44238799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 225
               

               Conread position:
               9-246
               

               Cow position:
               chrX:44736650-44736890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 223
               

               Conread position:
               9-246
               

               Cow position:
               chrX:47300408-47300649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               73, 216
               

               Conread position:
               9-246
               

               Cow position:
               chrX:47302527-47302767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               76, 223
               

               Conread position:
               9-283
               

               Cow position:
               chrX:19965190-19965474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               76, 254
               

               Conread position:
               9-376
               

               Cow position:
               chrX:27945848-27946224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 35
               

               Conread position:
               9-404
               

               Cow position:
               chrX:47484057-47484467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 224
               

               Conread position:
               9-443
               

               Cow position:
               chrX:48010810-48010360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               9-455
               

               Cow position:
               chrX:16541451-16541920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 166
               

               Conread position:
               9-583
               

               Cow position:
               chrX:11844035-11844612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 266
               

               Conread position:
               9-610
               

               Cow position:
               chrX:21064487-21063896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 66
               

               Conread position:
               10-446
               

               Cow position:
               chrX:21672767-21672314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 209
               

               Conread position:
               11-246
               

               Cow position:
               chrX:45124606-45124368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               74, 221
               

               Conread position:
               11-330
               

               Cow position:
               chrX:13853807-13853504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               200, 51
               

               Conread position:
               11-612
               

               Cow position:
               chrX:1055178-1055796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               626
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 285
               

               Conread position:
               12-183
               

               Cow position:
               chrX:9063328-9063152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               12-213
               

               Cow position:
               chrX:26205252-26205451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               12-270
               

               Cow position:
               chrX:30536-30271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               75, 135
               

               Conread position:
               14-432
               

               Cow position:
               chrX:7337043-7336613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 69
               

               Conread position:
               14-573
               

               Cow position:
               chrX:34662646-34663224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               586
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 215
               

               Conread position:
               17-223
               

               Cow position:
               chrX:20677950-20678151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               17-291
               

               Cow position:
               chrX:39220283-39220000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 209
               

               Conread position:
               19-256
               

               Cow position:
               chrX:32604873-32605122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               19-441
               

               Cow position:
               chrX:8518063-8517644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               20-152
               

               Cow position:
               chrX:38347116-38346979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               20-184
               

               Cow position:
               chrX:4169840-4170002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 139
               

               Conread position:
               20-207
               

               Cow position:
               chrX:39180039-39180230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 96
               

               Conread position:
               20-211
               

               Cow position:
               chrX:47079822-47079626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               20-214
               

               Cow position:
               chrX:43320858-43321057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 187
               

               Conread position:
               20-222
               

               Cow position:
               chrX:11859342-11859548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 112
               

               Conread position:
               20-309
               

               Cow position:
               chrX:40283317-40283028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 138
               

               Conread position:
               20-342
               

               Cow position:
               chrX:27302071-27301740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               58, 119
               

               Conread position:
               20-379
               

               Cow position:
               chrX:14955574-14955938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               258
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               49, 172
               

               Conread position:
               20-613
               

               Cow position:
               chrX:45373090-45373687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 7
               

               Conread position:
               21-223
               

               Cow position:
               chrX:17704581-17704380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               21-246
               

               Cow position:
               chrX:45097151-45097366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               21-247
               

               Cow position:
               chrX:23188596-23188812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               69, 30
               

               Conread position:
               21-317
               

               Cow position:
               chrX:169348-169645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 151
               

               Conread position:
               22-177
               

               Cow position:
               chrX:46533112-46533272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               22-193
               

               Cow position:
               chrX:21861250-21861424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               22-246
               

               Cow position:
               chrX:48652246-48652467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               22-247
               

               Cow position:
               chrX:18964633-18964860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               39, 136
               

               Conread position:
               23-214
               

               Cow position:
               chrX:29733391-29733596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               23-387
               

               Cow position:
               chrX:31252599-31252239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 98
               

               Conread position:
               23-571
               

               Cow position:
               chrX:11614875-11614359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 12
               

               Conread position:
               23-582
               

               Cow position:
               chrX:34503119-34502550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 196
               

               Conread position:
               23-612
               

               Cow position:
               chrX:45968337-45967758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               601
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 46
               

               Conread position:
               24-409
               

               Cow position:
               chrX:4515878-4515467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 102
               

               Conread position:
               24-418
               

               Cow position:
               chrX:47046323-47046728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 124
               

               Conread position:
               25-269
               

               Cow position:
               chrX:31626790-31627038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 46
               

               Conread position:
               26-589
               

               Cow position:
               chrX:7179079-7178528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               30-445
               

               Cow position:
               chrX:16416687-16416272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 68
               

               Conread position:
               34-614
               

               Cow position:
               chrX:24287753-24288318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 141
               

               Conread position:
               35-167
               

               Cow position:
               chrX:23185370-23185502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-259
               

               Cow position:
               chrX:6541547-6541783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               36, 195
               

               Conread position:
               38-294
               

               Cow position:
               chrX:16575289-16575040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               54, 174
               

               Conread position:
               40-330
               

               Cow position:
               chrX:4746072-4746359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               40-529
               

               Cow position:
               chrX:36311745-36311279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 181
               

               Conread position:
               42-243
               

               Cow position:
               chrX:23498506-23498709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               11, 109
               

               Conread position:
               43-399
               

               Cow position:
               chrX:3488719-3489075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 117
               

               Conread position:
               43-444
               

               Cow position:
               chrX:11856600-11856194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 220
               

               Conread position:
               43-614
               

               Cow position:
               chrX:14599704-14599131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 110
               

               Conread position:
               45-329
               

               Cow position:
               chrX:27119862-27119582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               164, 176
               

               Conread position:
               47-432
               

               Cow position:
               chrX:6265437-6265809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 17
               

               Conread position:
               47-540
               

               Cow position:
               chrX:38006604-38007099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               47-553
               

               Cow position:
               chrX:47481954-47481456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               48-214
               

               Cow position:
               chrX:42506069-42506231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               52-227
               

               Cow position:
               chrX:12191923-12191744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 99
               

               Conread position:
               52-239
               

               Cow position:
               chrX:20743768-20743575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               52-268
               

               Cow position:
               chrX:32977923-32978133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 104
               

               Conread position:
               52-290
               

               Cow position:
               chrX:41270823-41271077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               52-300
               

               Cow position:
               chrX:45883808-45884064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               38, 214
               

               Conread position:
               52-308
               

               Cow position:
               chrX:37129432-37129172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 230
               

               Conread position:
               52-314
               

               Cow position:
               chrX:16348408-16348672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               22, 98
               

               Conread position:
               52-331
               

               Cow position:
               chrX:23562796-23562516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               10, 169
               

               Conread position:
               52-336
               

               Cow position:
               chrX:9365513-9365799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 169
               

               Conread position:
               52-347
               

               Cow position:
               chrX:616101-616397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               52-351
               

               Cow position:
               chrX:6259987-6260298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               52-357
               

               Cow position:
               chrX:11084904-11085202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               52-374
               

               Cow position:
               chrX:29680103-29680422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 31
               

               Conread position:
               52-393
               

               Cow position:
               chrX:36068182-36067835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               24, 251
               

               Conread position:
               52-399
               

               Cow position:
               chrX:23785811-23785463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 79
               

               Conread position:
               52-416
               

               Cow position:
               chrX:43730061-43730422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 127
               

               Conread position:
               52-443
               

               Cow position:
               chrX:13382488-13382090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 97
               

               Conread position:
               52-445
               

               Cow position:
               chrX:618853-619244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 31
               

               Conread position:
               52-446
               

               Cow position:
               chrX:6690103-6690485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 38
               

               Conread position:
               52-583
               

               Cow position:
               chrX:11717618-11718152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 247
               

               Conread position:
               52-600
               

               Cow position:
               chrX:34402168-34401607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 5
               

               Conread position:
               52-614
               

               Cow position:
               chrX:5017262-5017811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               52-614
               

               Cow position:
               chrX:18694773-18695331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 93
               

               Conread position:
               52-614
               

               Cow position:
               chrX:40269657-40269071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 256
               

               Conread position:
               52-614
               

               Cow position:
               chrX:40480702-40481276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               53-213
               

               Cow position:
               chrX:18046558-18046398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               53-269
               

               Cow position:
               chrX:11593833-11594060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               34, 187
               

               Conread position:
               53-323
               

               Cow position:
               chrX:29194390-29194123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               53-353
               

               Cow position:
               chrX:45099290-45098976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               53-380
               

               Cow position:
               chrX:46433652-46433311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 28
               

               Conread position:
               53-386
               

               Cow position:
               chrX:47186169-47186498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               39, 44
               

               Conread position:
               53-397
               

               Cow position:
               chrX:42235361-42235722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 253
               

               Conread position:
               53-476
               

               Cow position:
               chrX:17726138-17725711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 163
               

               Conread position:
               54-441
               

               Cow position:
               chrX:6278337-6278738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               55-444
               

               Cow position:
               chrX:32623730-32623348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 223
               

               Conread position:
               55-446
               

               Cow position:
               chrX:9416524-9416930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 136
               

               Conread position:
               55-450
               

               Cow position:
               chrX:27771812-27772197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 80
               

               Conread position:
               55-524
               

               Cow position:
               chrX:33640135-33639653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 142
               

               Conread position:
               55-614
               

               Cow position:
               chrX:8797409-8796846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 105
               

               Conread position:
               56-614
               

               Cow position:
               chrX:878221-878775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 220
               

               Conread position:
               57-317
               

               Cow position:
               chrX:29549394-29549651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               57-349
               

               Cow position:
               chrX:7710380-7710680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 159
               

               Conread position:
               57-614
               

               Cow position:
               chrX:17888265-17888793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               564
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               58-366
               

               Cow position:
               chrX:23562003-23561723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               80, 25
               

               Conread position:
               58-488
               

               Cow position:
               chrX:37836735-37836310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 85
               

               Conread position:
               58-582
               

               Cow position:
               chrX:20697454-20697977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 159
               

               Conread position:
               59-341
               

               Cow position:
               chrX:38728890-38728608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 139
               

               Conread position:
               59-612
               

               Cow position:
               chrX:45113776-45113233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               60-252
               

               Cow position:
               chrX:29553441-29553245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               15, 156
               

               Conread position:
               61-335
               

               Cow position:
               chrX:36514739-36515014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               29, 20
               

               Conread position:
               63-614
               

               Cow position:
               chrX:29289730-29289171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 155
               

               Conread position:
               65-440
               

               Cow position:
               chrX:5900612-5900226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               69-496
               

               Cow position:
               chrX:48194894-48195328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               71-270
               

               Cow position:
               chrX:22914898-22915094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               71-273
               

               Cow position:
               chrX:6463742-6463550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 89
               

               Conread position:
               71-273
               

               Cow position:
               chrX:19097076-19097283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               71-330
               

               Cow position:
               chrX:5679428-5679684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               71-399
               

               Cow position:
               chrX:31312173-31311835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 195
               

               Conread position:
               71-614
               

               Cow position:
               chrX:42469803-42470342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               72-612
               

               Cow position:
               chrX:11073049-11073614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               75-606
               

               Cow position:
               chrX:28929975-28929454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               347
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               139, 44
               

               Conread position:
               80-445
               

               Cow position:
               chrX:24132021-24132387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               82-278
               

               Cow position:
               chrX:41111840-41111655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               83-218
               

               Cow position:
               chrX:38725935-38725801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               83-231
               

               Cow position:
               chrX:16830347-16830202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               138, 80
               

               Conread position:
               83-479
               

               Cow position:
               chrX:17542085-17541694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 22
               

               Conread position:
               83-614
               

               Cow position:
               chrX:3130699-3130160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 131
               

               Conread position:
               83-614
               

               Cow position:
               chrX:35288782-35288249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               548
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               84-297
               

               Cow position:
               chrX:11317842-11318053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               196, 136
               

               Conread position:
               84-352
               

               Cow position:
               chrX:19273581-19273862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               129, 228
               

               Conread position:
               84-401
               

               Cow position:
               chrX:38066329-38066631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               196, 154
               

               Conread position:
               84-445
               

               Cow position:
               chrX:42498921-42499265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               84-449
               

               Cow position:
               chrX:17662472-17662837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 65
               

               Conread position:
               84-564
               

               Cow position:
               chrX:19690341-19689860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 103
               

               Conread position:
               84-611
               

               Cow position:
               chrX:38226984-38227492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 21
               

               Conread position:
               84-614
               

               Cow position:
               chrX:10411858-10412377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 134
               

               Conread position:
               84-614
               

               Cow position:
               chrX:27516645-27516129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 35
               

               Conread position:
               84-614
               

               Cow position:
               chrX:38071645-38072172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 46
               

               Conread position:
               85-446
               

               Cow position:
               chrX:17630676-17631039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 193
               

               Conread position:
               88-445
               

               Cow position:
               chrX:21004807-21004448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 167
               

               Conread position:
               89-347
               

               Cow position:
               chrX:18425817-18426073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               192, 119
               

               Conread position:
               89-360
               

               Cow position:
               chrX:30263378-30263104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               89-387
               

               Cow position:
               chrX:16514145-16514443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 31
               

               Conread position:
               89-445
               

               Cow position:
               chrX:43049452-43049106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               89-571
               

               Cow position:
               chrX:2786435-2786908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 31
               

               Conread position:
               89-614
               

               Cow position:
               chrX:32743653-32743133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               532
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 7
               

               Conread position:
               90-204
               

               Cow position:
               chrX:37665811-37665697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-208
               

               Cow position:
               chrX:48683300-48683418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-253
               

               Cow position:
               chrX:27413631-27413469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               137, 99
               

               Conread position:
               90-315
               

               Cow position:
               chrX:19162221-19162443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               131, 101
               

               Conread position:
               90-430
               

               Cow position:
               chrX:23091991-23091660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 150
               

               Conread position:
               90-438
               

               Cow position:
               chrX:10959275-10959631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 118
               

               Conread position:
               90-439
               

               Cow position:
               chrX:7162176-7161842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               121, 59
               

               Conread position:
               90-445
               

               Cow position:
               chrX:1514299-1514640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 55
               

               Conread position:
               90-445
               

               Cow position:
               chrX:2029504-2029154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               66, 6
               

               Conread position:
               90-445
               

               Cow position:
               chrX:6563638-6563276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 6
               

               Conread position:
               90-445
               

               Cow position:
               chrX:11454929-11455288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 37
               

               Conread position:
               90-445
               

               Cow position:
               chrX:39558229-39558584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 34
               

               Conread position:
               90-445
               

               Cow position:
               chrX:40692631-40692974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               90-445
               

               Cow position:
               chrX:41884292-41884654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 209
               

               Conread position:
               90-446
               

               Cow position:
               chrX:43568039-43567702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 119
               

               Conread position:
               90-526
               

               Cow position:
               chrX:9161694-9161271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 6
               

               Conread position:
               90-547
               

               Cow position:
               chrX:43527628-43527164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 113
               

               Conread position:
               90-563
               

               Cow position:
               chrX:47744206-47743724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               305
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               132, 8
               

               Conread position:
               90-589
               

               Cow position:
               chrX:47054405-47054891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 60
               

               Conread position:
               90-609
               

               Cow position:
               chrX:42171176-42171699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 24
               

               Conread position:
               90-611
               

               Cow position:
               chrX:30543164-30543689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 209
               

               Conread position:
               90-612
               

               Cow position:
               chrX:7278031-7277529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 127
               

               Conread position:
               90-614
               

               Cow position:
               chrX:917248-917781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               544
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 96
               

               Conread position:
               90-614
               

               Cow position:
               chrX:11082502-11083019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 161
               

               Conread position:
               90-614
               

               Cow position:
               chrX:20801889-20801366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 124
               

               Conread position:
               90-614
               

               Cow position:
               chrX:28134458-28133944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 34
               

               Conread position:
               90-614
               

               Cow position:
               chrX:37232527-37232006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               534
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 108
               

               Conread position:
               91-342
               

               Cow position:
               chrX:21566526-21566272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               91-349
               

               Cow position:
               chrX:37986344-37986096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               124, 39
               

               Conread position:
               91-426
               

               Cow position:
               chrX:29121166-29120841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 118
               

               Conread position:
               91-613
               

               Cow position:
               chrX:27319353-27318812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               544
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               92-431
               

               Cow position:
               chrX:41271538-41271881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               50, 57
               

               Conread position:
               92-441
               

               Cow position:
               chrX:19841541-19841890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               25, 125
               

               Conread position:
               92-443
               

               Cow position:
               chrX:6041091-6041429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               130, 209
               

               Conread position:
               92-508
               

               Cow position:
               chrX:14222193-14221784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               285
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               189, 71
               

               Conread position:
               92-562
               

               Cow position:
               chrX:29049137-29048680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 124
               

               Conread position:
               92-564
               

               Cow position:
               chrX:2425000-2425480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 80
               

               Conread position:
               92-583
               

               Cow position:
               chrX:12180070-12179594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 81
               

               Conread position:
               92-611
               

               Cow position:
               chrX:14163326-14162789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 230
               

               Conread position:
               92-611
               

               Cow position:
               chrX:14407330-14407852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               92-613
               

               Cow position:
               chrX:7550683-7551199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 71
               

               Conread position:
               92-613
               

               Cow position:
               chrX:15119777-15120292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 82
               

               Conread position:
               92-613
               

               Cow position:
               chrX:15589756-15590276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               528
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               92-613
               

               Cow position:
               chrX:18897533-18898055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               528
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 80
               

               Conread position:
               92-613
               

               Cow position:
               chrX:32094328-32094854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 80
               

               Conread position:
               93-278
               

               Cow position:
               chrX:44954465-44954280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               155, 123
               

               Conread position:
               93-317
               

               Cow position:
               chrX:44837093-44836881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               93-407
               

               Cow position:
               chrX:47300786-47301102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 129
               

               Conread position:
               93-479
               

               Cow position:
               chrX:45403708-45404104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               93-593
               

               Cow position:
               chrX:16721687-16722201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 115
               

               Conread position:
               93-609
               

               Cow position:
               chrX:26625554-26626089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 180
               

               Conread position:
               95-329
               

               Cow position:
               chrX:6656497-6656269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               127, 24
               

               Conread position:
               95-441
               

               Cow position:
               chrX:29032525-29032185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               105, 24
               

               Conread position:
               95-600
               

               Cow position:
               chrX:48248934-48248428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               95-613
               

               Cow position:
               chrX:28111624-28111090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 30
               

               Conread position:
               95-614
               

               Cow position:
               chrX:38936815-38936286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 69
               

               Conread position:
               96-259
               

               Cow position:
               chrX:19943122-19943284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               115, 34
               

               Conread position:
               96-262
               

               Cow position:
               chrX:29115819-29115661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               96-614
               

               Cow position:
               chrX:35224410-35223897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 125
               

               Conread position:
               97-341
               

               Cow position:
               chrX:48044402-48044641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               180, 53
               

               Conread position:
               97-455
               

               Cow position:
               chrX:41084028-41083678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               103, 112
               

               Conread position:
               97-557
               

               Cow position:
               chrX:47967720-47967253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 239
               

               Conread position:
               97-614
               

               Cow position:
               chrX:7572018-7571498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 118
               

               Conread position:
               99-484
               

               Cow position:
               chrX:7497353-7496970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 20
               

               Conread position:
               99-489
               

               Cow position:
               chrX:24259468-24259856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               263
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               43, 201
               

               Conread position:
               99-534
               

               Cow position:
               chrX:13322876-13323345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               314
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               64, 194
               

               Conread position:
               99-563
               

               Cow position:
               chrX:28787460-28787017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               384, 20
               

               Conread position:
               101-446
               

               Cow position:
               chrX:27680507-27680166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 167
               

               Conread position:
               101-481
               

               Cow position:
               chrX:488613-488218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 209
               

               Conread position:
               101-482
               

               Cow position:
               chrX:2467993-2467607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 103
               

               Conread position:
               105-369
               

               Cow position:
               chrX:22466060-22465798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               109-420
               

               Cow position:
               chrX:45993331-45993001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               109-614
               

               Cow position:
               chrX:44873460-44873939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 35
               

               Conread position:
               110-348
               

               Cow position:
               chrX:27685349-27685111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 107
               

               Conread position:
               112-614
               

               Cow position:
               chrX:27106357-27105853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 80
               

               Conread position:
               114-614
               

               Cow position:
               chrX:26440689-26441185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 43
               

               Conread position:
               116-419
               

               Cow position:
               chrX:15576642-15576334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               113, 56
               

               Conread position:
               116-598
               

               Cow position:
               chrX:21749368-21749847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 117
               

               Conread position:
               116-601
               

               Cow position:
               chrX:32583715-32584203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 56
               

               Conread position:
               116-613
               

               Cow position:
               chrX:30228015-30228514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 56
               

               Conread position:
               116-613
               

               Cow position:
               chrX:37133440-37133938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 35
               

               Conread position:
               117-517
               

               Cow position:
               chrX:20710166-20709767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 7
               

               Conread position:
               117-568
               

               Cow position:
               chrX:37843810-37843361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 13
               

               Conread position:
               118-515
               

               Cow position:
               chrX:11313687-11314084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 158
               

               Conread position:
               118-613
               

               Cow position:
               chrX:11949409-11949897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 33
               

               Conread position:
               119-526
               

               Cow position:
               chrX:12826842-12826430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 11
               

               Conread position:
               120-442
               

               Cow position:
               chrX:12405291-12405602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 228
               

               Conread position:
               120-562
               

               Cow position:
               chrX:20945655-20945215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               120-586
               

               Cow position:
               chrX:19290852-19290395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 85
               

               Conread position:
               121-302
               

               Cow position:
               chrX:1572050-1572228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               159, 93
               

               Conread position:
               124-395
               

               Cow position:
               chrX:48035511-48035241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               219, 92
               

               Conread position:
               124-483
               

               Cow position:
               chrX:37415986-37416349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 37
               

               Conread position:
               124-613
               

               Cow position:
               chrX:12466583-12466091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 107
               

               Conread position:
               125-407
               

               Cow position:
               chrX:43973630-43973360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               90, 71
               

               Conread position:
               125-611
               

               Cow position:
               chrX:42507563-42508046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 82
               

               Conread position:
               130-337
               

               Cow position:
               chrX:19003373-19003175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               151, 20
               

               Conread position:
               130-401
               

               Cow position:
               chrX:37541197-37540932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               151, 7
               

               Conread position:
               131-288
               

               Cow position:
               chrX:13136153-13136309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               130, 85
               

               Conread position:
               131-443
               

               Cow position:
               chrX:11589509-11589826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 85
               

               Conread position:
               132-614
               

               Cow position:
               chrX:24105702-24105222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 97
               

               Conread position:
               134-477
               

               Cow position:
               chrX:34270479-34270148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 84
               

               Conread position:
               137-549
               

               Cow position:
               chrX:6234376-6234774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 226
               

               Conread position:
               140-279
               

               Cow position:
               chrX:21004810-21004951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               143-614
               

               Cow position:
               chrX:48243400-48243857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               336, 12
               

               Conread position:
               144-279
               

               Cow position:
               chrX:17301240-17301376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               144-596
               

               Cow position:
               chrX:32188294-32188746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 72
               

               Conread position:
               145-485
               

               Cow position:
               chrX:12018357-12017999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 74
               

               Conread position:
               145-614
               

               Cow position:
               chrX:30163065-30162601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 152
               

               Conread position:
               146-334
               

               Cow position:
               chrX:20790977-20790797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               146-440
               

               Cow position:
               chrX:14900669-14900952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 17
               

               Conread position:
               146-448
               

               Cow position:
               chrX:40116484-40116186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               147-556
               

               Cow position:
               chrX:25232656-25232239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 153
               

               Conread position:
               149-303
               

               Cow position:
               chrX:42789678-42789529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               130, 13
               

               Conread position:
               149-455
               

               Cow position:
               chrX:41166901-41167212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 268
               

               Conread position:
               149-500
               

               Cow position:
               chrX:35042279-35041931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 59
               

               Conread position:
               150-406
               

               Cow position:
               chrX:36961701-36961438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 58
               

               Conread position:
               150-412
               

               Cow position:
               chrX:17908228-17908487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 60
               

               Conread position:
               150-523
               

               Cow position:
               chrX:19188991-19188622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 55
               

               Conread position:
               150-592
               

               Cow position:
               chrX:7718909-7718469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 59
               

               Conread position:
               151-396
               

               Cow position:
               chrX:41991986-41992228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               151-614
               

               Cow position:
               chrX:45043633-45043153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 45
               

               Conread position:
               153-425
               

               Cow position:
               chrX:8070642-8070916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               128, 63
               

               Conread position:
               153-612
               

               Cow position:
               chrX:42994670-42994211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 62
               

               Conread position:
               154-445
               

               Cow position:
               chrX:9855354-9855064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 65
               

               Conread position:
               154-445
               

               Cow position:
               chrX:9954195-9953905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 65
               

               Conread position:
               154-450
               

               Cow position:
               chrX:38840940-38840647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               145, 29
               

               Conread position:
               154-484
               

               Cow position:
               chrX:40648044-40647703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 64
               

               Conread position:
               155-525
               

               Cow position:
               chrX:28845888-28845528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               156-317
               

               Cow position:
               chrX:29487954-29488107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               123, 58
               

               Conread position:
               156-582
               

               Cow position:
               chrX:28105972-28105553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 58
               

               Conread position:
               156-614
               

               Cow position:
               chrX:23571739-23572205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 63
               

               Conread position:
               157-450
               

               Cow position:
               chrX:40789265-40788962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               62, 136
               

               Conread position:
               157-592
               

               Cow position:
               chrX:41199161-41198703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 61
               

               Conread position:
               158-488
               

               Cow position:
               chrX:42875035-42874699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 52
               

               Conread position:
               158-587
               

               Cow position:
               chrX:41743965-41743535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 8
               

               Conread position:
               158-614
               

               Cow position:
               chrX:42461692-42462153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 59
               

               Conread position:
               159-614
               

               Cow position:
               chrX:35681393-35680939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 49
               

               Conread position:
               160-482
               

               Cow position:
               chrX:47191357-47191668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 107
               

               Conread position:
               160-507
               

               Cow position:
               chrX:19015487-19015144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 92
               

               Conread position:
               160-614
               

               Cow position:
               chrX:15139497-15139954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 55
               

               Conread position:
               160-614
               

               Cow position:
               chrX:40452168-40452626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 45
               

               Conread position:
               161-416
               

               Cow position:
               chrX:26286029-26285772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               162-614
               

               Cow position:
               chrX:17498133-17497691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 77
               

               Conread position:
               163-424
               

               Cow position:
               chrX:10123306-10123562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               163-456
               

               Cow position:
               chrX:47209393-47209123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               108, 52
               

               Conread position:
               163-614
               

               Cow position:
               chrX:16789809-16790222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 6
               

               Conread position:
               166-614
               

               Cow position:
               chrX:36249817-36250267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 64
               

               Conread position:
               167-401
               

               Cow position:
               chrX:45875041-45874806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               112, 61
               

               Conread position:
               169-317
               

               Cow position:
               chrX:35848605-35848456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               169-419
               

               Cow position:
               chrX:28835861-28836112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 128
               

               Conread position:
               169-450
               

               Cow position:
               chrX:47756887-47757170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 48
               

               Conread position:
               169-531
               

               Cow position:
               chrX:28157542-28157165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 120
               

               Conread position:
               169-614
               

               Cow position:
               chrX:32127951-32128399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 45
               

               Conread position:
               170-341
               

               Cow position:
               chrX:36723049-36723220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               109, 45
               

               Conread position:
               170-369
               

               Cow position:
               chrX:29563329-29563528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 90
               

               Conread position:
               170-380
               

               Cow position:
               chrX:37750214-37750425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 130
               

               Conread position:
               170-408
               

               Cow position:
               chrX:4091680-4091448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               110, 38
               

               Conread position:
               170-434
               

               Cow position:
               chrX:29509398-29509669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               170-502
               

               Cow position:
               chrX:25238219-25237885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 72
               

               Conread position:
               170-531
               

               Cow position:
               chrX:14925040-14924678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 20
               

               Conread position:
               170-610
               

               Cow position:
               chrX:47379427-47379868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 47
               

               Conread position:
               170-614
               

               Cow position:
               chrX:12116087-12115636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 49
               

               Conread position:
               172-324
               

               Cow position:
               chrX:32747722-32747571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               172-614
               

               Cow position:
               chrX:11581971-11581532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 44
               

               Conread position:
               172-614
               

               Cow position:
               chrX:14819756-14819307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               173-377
               

               Cow position:
               chrX:14003609-14003813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               173-487
               

               Cow position:
               chrX:2964089-2963772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               12, 45
               

               Conread position:
               174-349
               

               Cow position:
               chrX:31986827-31987004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               174-488
               

               Cow position:
               chrX:9997298-9997610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 43
               

               Conread position:
               174-611
               

               Cow position:
               chrX:45412625-45413053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 42
               

               Conread position:
               174-614
               

               Cow position:
               chrX:3653797-3653360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 106
               

               Conread position:
               176-446
               

               Cow position:
               chrX:44053294-44053021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               104, 123
               

               Conread position:
               176-480
               

               Cow position:
               chrX:10096066-10095755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 115
               

               Conread position:
               176-612
               

               Cow position:
               chrX:38439515-38439073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 124
               

               Conread position:
               177-374
               

               Cow position:
               chrX:10278844-10278649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               102, 40
               

               Conread position:
               177-439
               

               Cow position:
               chrX:37048548-37048811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               177-582
               

               Cow position:
               chrX:17271248-17271663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 115
               

               Conread position:
               184-469
               

               Cow position:
               chrX:20752280-20752003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               184-614
               

               Cow position:
               chrX:2648324-2648767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               31, 116
               

               Conread position:
               189-425
               

               Cow position:
               chrX:41560230-41560455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 77
               

               Conread position:
               194-323
               

               Cow position:
               chrX:10079431-10079560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               87, 105
               

               Conread position:
               197-451
               

               Cow position:
               chrX:35284638-35284375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 167
               

               Conread position:
               200-467
               

               Cow position:
               chrX:30763408-30763677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 215
               

               Conread position:
               201-445
               

               Cow position:
               chrX:37137972-37138210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               103, 14
               

               Conread position:
               203-398
               

               Cow position:
               chrX:1505718-1505523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               205-614
               

               Cow position:
               chrX:10437662-10438056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 12
               

               Conread position:
               207-612
               

               Cow position:
               chrX:18949734-18950142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 145
               

               Conread position:
               207-614
               

               Cow position:
               chrX:35609993-35609581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               209-423
               

               Cow position:
               chrX:46315374-46315593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               70, 88
               

               Conread position:
               211-570
               

               Cow position:
               chrX:11806012-11806377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 88
               

               Conread position:
               212-607
               

               Cow position:
               chrX:19019105-19019490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 140
               

               Conread position:
               217-449
               

               Cow position:
               chrX:2383484-2383249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               63, 88
               

               Conread position:
               217-608
               

               Cow position:
               chrX:45566630-45566209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               84, 8
               

               Conread position:
               217-610
               

               Cow position:
               chrX:21665599-21665992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               217-612
               

               Cow position:
               chrX:160037-160443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 89
               

               Conread position:
               220-434
               

               Cow position:
               chrX:4750313-4750523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               220-536
               

               Cow position:
               chrX:42855401-42855084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 16
               

               Conread position:
               221-611
               

               Cow position:
               chrX:42086848-42086460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 53
               

               Conread position:
               227-436
               

               Cow position:
               chrX:48684239-48684450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               15, 130
               

               Conread position:
               227-613
               

               Cow position:
               chrX:35387917-35388311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 72
               

               Conread position:
               229-440
               

               Cow position:
               chrX:44063737-44063949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 36
               

               Conread position:
               232-445
               

               Cow position:
               chrX:25411821-25411604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               49, 64
               

               Conread position:
               232-611
               

               Cow position:
               chrX:24201167-24200793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 74
               

               Conread position:
               232-612
               

               Cow position:
               chrX:38967628-38967248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               237-601
               

               Cow position:
               chrX:45658104-45658472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 58
               

               Conread position:
               238-445
               

               Cow position:
               chrX:4942782-4942987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               202, 42
               

               Conread position:
               239-437
               

               Cow position:
               chrX:4482941-4482734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               245-572
               

               Cow position:
               chrX:48227641-48227982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               248-381
               

               Cow position:
               chrX:41271244-41271380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 5
               

               Conread position:
               254-568
               

               Cow position:
               chrX:44731556-44731241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               254-614
               

               Cow position:
               chrX:4123796-4123431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 114
               

               Conread position:
               261-445
               

               Cow position:
               chrX:6640081-6639888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               261-601
               

               Cow position:
               chrX:32978305-32978649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 21
               

               Conread position:
               262-612
               

               Cow position:
               chrX:38151644-38151285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               266-543
               

               Cow position:
               chrX:18989850-18990134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               272-613
               

               Cow position:
               chrX:29915281-29915629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 118
               

               Conread position:
               284-601
               

               Cow position:
               chrX:35632823-35633151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               9, 181
               

               Conread position:
               284-613
               

               Cow position:
               chrX:32144237-32144567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               287-518
               

               Cow position:
               chrX:25617983-25618227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               57, 218
               

               Conread position:
               287-608
               

               Cow position:
               chrX:21795420-21795096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 129
               

               Conread position:
               288-569
               

               Cow position:
               chrX:7382247-7381964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 209
               

               Conread position:
               289-612
               

               Cow position:
               chrX:10916671-10916345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 17
               

               Conread position:
               291-612
               

               Cow position:
               chrX:29049884-29049572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 13
               

               Conread position:
               292-612
               

               Cow position:
               chrX:23696489-23696825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 175
               

               Conread position:
               297-438
               

               Cow position:
               chrX:18812169-18812029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 108
               

               Conread position:
               297-440
               

               Cow position:
               chrX:10462550-10462406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               75, 54
               

               Conread position:
               298-516
               

               Cow position:
               chrX:38794643-38794418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               73, 115
               

               Conread position:
               298-526
               

               Cow position:
               chrX:26619447-26619678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               50, 121
               

               Conread position:
               298-606
               

               Cow position:
               chrX:46447914-46448231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               66, 108
               

               Conread position:
               298-607
               

               Cow position:
               chrX:44908233-44907918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               299-450
               

               Cow position:
               chrX:36154659-36154813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               299-611
               

               Cow position:
               chrX:13068824-13069145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 197
               

               Conread position:
               299-614
               

               Cow position:
               chrX:27322955-27323266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               300-614
               

               Cow position:
               chrX:9970834-9970518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 134
               

               Conread position:
               305-613
               

               Cow position:
               chrX:32870876-32871190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 89
               
Show alignments to all cow chromosomes.
Conread position:	1-114
Cow position:	chrX:42159155-42159037 (view UCSC Genome Browser custom track)
Alignm length:	119
Alignm identity:	94
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	89, 0
Conread position:	1-117
Cow position:	chrX:10479963-10479842 (view UCSC Genome Browser custom track)
Alignm length:	122
Alignm identity:	101
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	89, 0
Conread position:	1-122
Cow position:	chrX:1996238-1996364 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	104
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	89, 0
Conread position:	1-132
Cow position:	chrX:37717935-37717800 (view UCSC Genome Browser custom track)
Alignm length:	137
Alignm identity:	108
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	89, 128
Conread position:	1-134
Cow position:	chrX:11670900-11670762 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	109
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	87, 0
Conread position:	1-136
Cow position:	chrX:26720477-26720608 (view UCSC Genome Browser custom track)
Alignm length:	137
Alignm identity:	105
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	76, 14
Conread position:	1-139
Cow position:	chrX:35509467-35509608 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	110
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	89, 62
Conread position:	1-140
Cow position:	chrX:3494837-3494975 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	113
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	89, 61
Conread position:	1-142
Cow position:	chrX:11589154-11589299 (view UCSC Genome Browser custom track)
Alignm length:	147
Alignm identity:	114
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	88, 46
Conread position:	1-143
Cow position:	chrX:9451554-9451412 (view UCSC Genome Browser custom track)
Alignm length:	147
Alignm identity:	113
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	61, 41
Conread position:	1-147
Cow position:	chrX:41215536-41215385 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	114
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	89, 0
Conread position:	1-148
Cow position:	chrX:22552766-22552917 (view UCSC Genome Browser custom track)
Alignm length:	153
Alignm identity:	117
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	88, 17
Conread position:	1-151
Cow position:	chrX:26881866-26882021 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	121
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	89, 0
Conread position:	1-158
Cow position:	chrX:1101763-1101609 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	122
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	78, 0
Conread position:	1-159
Cow position:	chrX:16770278-16770115 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	122
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	84, 0
Conread position:	1-160
Cow position:	chrX:17298473-17298309 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	123
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	75, 137
Conread position:	1-161
Cow position:	chrX:4602725-4602889 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	123
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	86, 136
Conread position:	1-163
Cow position:	chrX:41011103-41010945 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	127
Alignm E-value:	8e-31
Alignm gaps (pig, cow):	19, 0
Conread position:	1-166
Cow position:	chrX:6634558-6634388 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	130
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	86, 0
Conread position:	1-167
Cow position:	chrX:8759836-8759668 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	136
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	89, 127