Cow genome map

Conread name: rpliv0134_k7.y1

Conread position: 26-275
Cow position: chr19:33237435-33237180 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 93, 26

Conread position: 28-275
Cow position: chr19:19562056-19561802 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 113, 24

Conread position: 31-202
Cow position: chr19:42217081-42217252 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 87, 108

Conread position: 32-216
Cow position: chr19:14169213-14169388 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 23

Conread position: 35-261
Cow position: chr19:13765923-13766140 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 19

Conread position: 41-149
Cow position: chr19:13266984-13267094 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 43-270
Cow position: chr19:36060177-36059948 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 30, 60

Conread position: 43-275
Cow position: chr19:4800979-4800748 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 22

Conread position: 45-179
Cow position: chr19:41605110-41604975 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 28

Conread position: 48-265
Cow position: chr19:38664102-38664308 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 17

Conread position: 53-208
Cow position: chr19:19549343-19549504 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 53-261
Cow position: chr19:7147845-7148043 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 90

Conread position: 54-260
Cow position: chr19:4587520-4587716 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 58-219
Cow position: chr19:37639356-37639517 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 109

Conread position: 58-261
Cow position: chr19:10081296-10081095 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 88

Conread position: 58-261
Cow position: chr19:26269019-26269214 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 97

Conread position: 58-266
Cow position: chr19:11866104-11866295 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 58-269
Cow position: chr19:16693813-16694019 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 41

Conread position: 59-251
Cow position: chr19:28928794-28928983 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 76

Conread position: 59-251
Cow position: chr19:33117069-33116883 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 81

Conread position: 59-261
Cow position: chr19:25035700-25035499 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 12

Conread position: 59-262
Cow position: chr19:53644970-53645169 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 43

Conread position: 59-268
Cow position: chr19:52621645-52621845 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 195, 23

Conread position: 59-272
Cow position: chr19:4339428-4339632 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 19

Conread position: 59-272
Cow position: chr19:38717130-38717339 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 107

Conread position: 59-272
Cow position: chr19:54004580-54004789 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 100

Conread position: 59-275
Cow position: chr19:9390936-9391145 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 89

Conread position: 59-275
Cow position: chr19:18921019-18921236 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 60, 13

Conread position: 59-275
Cow position: chr19:46094424-46094630 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 60, 70

Conread position: 59-278
Cow position: chr19:7675450-7675237 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 40

Conread position: 59-278
Cow position: chr19:25853794-25853577 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 60-168
Cow position: chr19:18344246-18344355 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 60-268
Cow position: chr19:2358281-2358084 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 81

Conread position: 60-271
Cow position: chr19:14348229-14348022 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 97

Conread position: 60-275
Cow position: chr19:11424080-11424309 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 198

Conread position: 60-275
Cow position: chr19:34757786-34757996 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 94

Conread position: 60-276
Cow position: chr19:21044583-21044358 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 134

Conread position: 61-149
Cow position: chr19:2137627-2137716 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 61-153
Cow position: chr19:13121085-13121178 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 61-154
Cow position: chr19:43292534-43292440 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 61-272
Cow position: chr19:42236247-42236037 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 49

Conread position: 61-275
Cow position: chr19:39361357-39361152 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 86

Conread position: 62-256
Cow position: chr19:17796106-17795921 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 57, 23

Conread position: 64-256
Cow position: chr19:43058738-43058552 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 79

Conread position: 64-261
Cow position: chr19:33691337-33691151 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 54, 88

Conread position: 64-283
Cow position: chr19:53404170-53403959 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 39

Conread position: 65-275
Cow position: chr19:4449970-4449773 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 66-218
Cow position: chr19:47234285-47234136 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 90

Conread position: 66-268
Cow position: chr19:3110076-3109885 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 42

Conread position: 67-183
Cow position: chr19:54919594-54919713 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 67-240
Cow position: chr19:8034143-8034309 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 42

Conread position: 67-261
Cow position: chr19:21199345-21199159 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 78

Conread position: 67-274
Cow position: chr19:46919329-46919130 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 52

Conread position: 67-275
Cow position: chr19:54915478-54915686 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 119

Conread position: 67-285
Cow position: chr19:2327221-2327437 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 74

Conread position: 68-264
Cow position: chr19:2589709-2589517 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 40

Conread position: 68-269
Cow position: chr19:51396975-51397184 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 68-292
Cow position: chr19:14167815-14167590 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 51, 99

Conread position: 70-255
Cow position: chr19:14421736-14421911 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 63

Conread position: 71-265
Cow position: chr19:2130995-2131187 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 37

Conread position: 72-219
Cow position: chr19:33525750-33525896 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 13

Conread position: 72-234
Cow position: chr19:38948089-38948246 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 47, 63

Conread position: 72-239
Cow position: chr19:29471801-29471633 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 22

Conread position: 72-240
Cow position: chr19:53542697-53542858 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 74

Conread position: 72-254
Cow position: chr19:22167017-22167191 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 84

Conread position: 72-261
Cow position: chr19:21335382-21335579 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 72-262
Cow position: chr19:79858-79682 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 47, 75

Conread position: 72-268
Cow position: chr19:21605329-21605134 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 47, 114

Conread position: 72-272
Cow position: chr19:19489628-19489823 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 21

Conread position: 72-273
Cow position: chr19:39376209-39376406 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 63

Conread position: 72-276
Cow position: chr19:52711146-52711354 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 115

Conread position: 73-272
Cow position: chr19:1553898-1553717 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 73-272
Cow position: chr19:10114417-10114625 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 184

Conread position: 74-226
Cow position: chr19:32505497-32505648 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 26

Conread position: 74-226
Cow position: chr19:42069467-42069314 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 45, 80

Conread position: 74-268
Cow position: chr19:13316222-13316406 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 74-275
Cow position: chr19:29627194-29627384 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 31

Conread position: 77-267
Cow position: chr19:38339790-38339970 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 77-272
Cow position: chr19:32505923-32506108 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 68

Conread position: 77-275
Cow position: chr19:34619814-34620022 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 165

Conread position: 78-256
Cow position: chr19:6079166-6079336 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 84

Conread position: 78-256
Cow position: chr19:50682243-50682420 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 108, 26

Conread position: 78-269
Cow position: chr19:10287657-10287460 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 78-270
Cow position: chr19:43373232-43373051 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 62

Conread position: 78-271
Cow position: chr19:51637229-51637050 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 67

Conread position: 78-272
Cow position: chr19:15076007-15076191 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 67

Conread position: 78-272
Cow position: chr19:29972050-29972247 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 0

Conread position: 78-282
Cow position: chr19:7404172-7404378 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 79-272
Cow position: chr19:42763395-42763207 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 80

Conread position: 80-250
Cow position: chr19:27348084-27348261 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 170

Conread position: 80-265
Cow position: chr19:39585922-39586094 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 87

Conread position: 87-272
Cow position: chr19:2965726-2965550 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 73

Conread position: 87-275
Cow position: chr19:39254263-39254439 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 64

Conread position: 87-282
Cow position: chr19:6024859-6025049 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 71

Conread position: 90-261
Cow position: chr19:20331648-20331816 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 86

Conread position: 90-282
Cow position: chr19:48475336-48475128 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 185

Conread position: 93-271
Cow position: chr19:4511212-4511387 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 13

Conread position: 103-266
Cow position: chr19:14907117-14906955 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 84

Conread position: 111-283
Cow position: chr19:19668041-19667876 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 48

Conread position: 112-256
Cow position: chr19:17069025-17068879 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 44

Conread position: 139-276
Cow position: chr19:33702211-33702349 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 141-267
Cow position: chr19:30886535-30886409 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 26

Show alignments to all cow chromosomes.