Cow genome map


           Conread name:
           rpliv0134_k7.y1
        

               Conread position:
               25-264
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               26-261
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 30
               

               Conread position:
               27-175
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               29-262
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 90
               

               Conread position:
               40-211
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               40-257
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 146
               

               Conread position:
               41-261
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               78, 16
               

               Conread position:
               42-275
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               48-160
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               49-275
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               50-161
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               51-272
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               55-154
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               56-262
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 90
               

               Conread position:
               56-267
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 131
               

               Conread position:
               58-235
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               59, 90
               

               Conread position:
               58-240
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               58-275
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               59-153
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               59-154
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               59-257
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               59-261
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               59-261
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               59-267
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               59-272
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               74, 13
               

               Conread position:
               59-275
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               59-276
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               60, 19
               

               Conread position:
               59-278
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               60-188
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               60-235
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               60-238
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 162
               

               Conread position:
               60-275
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               60, 92
               

               Conread position:
               61-154
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               61-238
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               58, 38
               

               Conread position:
               61-238
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               16, 46
               

               Conread position:
               61-255
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               61-259
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               160
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               58, 73
               

               Conread position:
               61-275
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               64-275
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               65-256
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               65-268
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               66-185
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 100
               

               Conread position:
               66-261
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               66-267
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               66-271
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               66-275
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               66-275
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               66-275
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 74
               

               Conread position:
               66-275
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               53, 90
               

               Conread position:
               66-282
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               53, 35
               

               Conread position:
               67-275
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               67-275
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 101
               

               Conread position:
               68-272
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               68-276
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               50, 105
               

               Conread position:
               70-240
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               71-272
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 73
               

               Conread position:
               72-226
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               47, 128
               

               Conread position:
               72-241
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               72-270
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               72-272
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               47, 66
               

               Conread position:
               72-275
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               73-173
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               73-175
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               73-268
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 20
               

               Conread position:
               74-257
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 72
               

               Conread position:
               74-257
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               74-273
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               45, 113
               

               Conread position:
               75-240
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               76-240
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               43, 75
               

               Conread position:
               78-275
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               78-276
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 31
               

               Conread position:
               79-272
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 58
               

               Conread position:
               80-275
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               38, 59
               

               Conread position:
               82-272
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               82-275
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               37, 57
               

               Conread position:
               87-261
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               87-275
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               103-268
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               16, 121
               

               Conread position:
               108-268
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               112-261
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               135-312
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               139-275
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               145-255
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 40
               

               Conread position:
               151-268
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               166-275
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.