Cow genome map
| Conread name: | rpliv0134_k7.y1 |
| Conread position: | 22-273 |
| Cow position: | chr26:32776229-32776474 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 23-275 |
| Cow position: | chr26:16435389-16435622 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 26-228 |
| Cow position: | chr26:16393199-16393014 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 26 |
| Conread position: | 28-171 |
| Cow position: | chr26:16784090-16783942 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 32-257 |
| Cow position: | chr26:32571575-32571345 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 41-275 |
| Cow position: | chr26:13818699-13818456 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 70 |
| Conread position: | 44-278 |
| Cow position: | chr26:26293934-26294165 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 45-152 |
| Cow position: | chr26:25663305-25663412 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 45-261 |
| Cow position: | chr26:7314848-7315061 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 73, 57 |
| Conread position: | 47-261 |
| Cow position: | chr26:13020874-13021097 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 148 |
| Conread position: | 54-153 |
| Cow position: | chr26:21822812-21822912 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 54-275 |
| Cow position: | chr26:19774035-19774265 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 55-189 |
| Cow position: | chr26:10933691-10933827 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 55-261 |
| Cow position: | chr26:33242145-33241937 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 133 |
| Conread position: | 58-197 |
| Cow position: | chr26:34154401-34154258 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 58-261 |
| Cow position: | chr26:107272-107073 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 123, 49 |
| Conread position: | 58-275 |
| Cow position: | chr26:28759559-28759786 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 59-154 |
| Cow position: | chr26:26919767-26919671 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 59-156 |
| Cow position: | chr26:16423827-16423726 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 59-202 |
| Cow position: | chr26:10219993-10220136 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 59-235 |
| Cow position: | chr26:28224695-28224521 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 50 |
| Conread position: | 59-240 |
| Cow position: | chr26:25197069-25197248 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 123 |
| Conread position: | 59-255 |
| Cow position: | chr26:31605660-31605460 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 59-261 |
| Cow position: | chr26:30254386-30254585 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 59-261 |
| Cow position: | chr26:32014149-32013956 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 59-269 |
| Cow position: | chr26:33691234-33691449 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 59, 125 |
| Conread position: | 60-241 |
| Cow position: | chr26:21311687-21311856 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 61-175 |
| Cow position: | chr26:32863389-32863506 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 61-261 |
| Cow position: | chr26:27482334-27482518 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 101 |
| Conread position: | 62-267 |
| Cow position: | chr26:830041-829846 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 63-272 |
| Cow position: | chr26:6865283-6865061 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 64-240 |
| Cow position: | chr26:32553937-32553756 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 64-285 |
| Cow position: | chr26:13705543-13705755 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 65-272 |
| Cow position: | chr26:24453685-24453874 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 196, 41 |
| Conread position: | 66-240 |
| Cow position: | chr26:32831353-32831513 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 66-261 |
| Cow position: | chr26:14175517-14175330 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 66-275 |
| Cow position: | chr26:6714076-6714268 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 67-238 |
| Cow position: | chr26:12964459-12964626 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 52, 89 |
| Conread position: | 67-261 |
| Cow position: | chr26:32825761-32825952 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 70-261 |
| Cow position: | chr26:677741-677932 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 49, 116 |
| Conread position: | 71-240 |
| Cow position: | chr26:27176848-27177016 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 117 |
| Conread position: | 72-240 |
| Cow position: | chr26:35678066-35677910 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 79 |
| Conread position: | 72-265 |
| Cow position: | chr26:33526782-33526974 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 93 |
| Conread position: | 72-282 |
| Cow position: | chr26:32672200-32672397 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 73-272 |
| Cow position: | chr26:33745131-33744941 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 78-261 |
| Cow position: | chr26:7212350-7212536 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 84-272 |
| Cow position: | chr26:22901048-22901228 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 87-266 |
| Cow position: | chr26:32381730-32381555 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 94-272 |
| Cow position: | chr26:2739242-2739418 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 117-280 |
| Cow position: | chr26:24472412-24472243 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 124 |
| Conread position: | 132-272 |
| Cow position: | chr26:9104101-9104244 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 142-269 |
| Cow position: | chr26:7183831-7183957 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 144-272 |
| Cow position: | chr26:11263803-11263676 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 163-275 |
| Cow position: | chr26:8353114-8353003 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.