Cow genome map
| Conread name: | rpliv0134_k7.y1 |
| Conread position: | 13-275 |
| Cow position: | chr9:38941664-38941420 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 23-282 |
| Cow position: | chr9:6392413-6392667 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 25-174 |
| Cow position: | chr9:52418362-52418210 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 25-281 |
| Cow position: | chr9:1878691-1878938 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 25-283 |
| Cow position: | chr9:55013560-55013310 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 119 |
| Conread position: | 31-257 |
| Cow position: | chr9:19067561-19067777 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 88, 27 |
| Conread position: | 31-272 |
| Cow position: | chr9:8535643-8535876 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 36-240 |
| Cow position: | chr9:52740132-52739919 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 16 |
| Conread position: | 39-275 |
| Cow position: | chr9:28392251-28392013 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 40-275 |
| Cow position: | chr9:1884344-1884118 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 80, 24 |
| Conread position: | 43-153 |
| Cow position: | chr9:30653257-30653147 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 43-275 |
| Cow position: | chr9:5104613-5104391 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 27, 111 |
| Conread position: | 44-220 |
| Cow position: | chr9:51012002-51011834 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 44-236 |
| Cow position: | chr9:4991339-4991156 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 67 |
| Conread position: | 45-155 |
| Cow position: | chr9:48016787-48016901 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 48-275 |
| Cow position: | chr9:62668019-62668260 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 49-257 |
| Cow position: | chr9:2037239-2037435 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 49-272 |
| Cow position: | chr9:55084529-55084293 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 51-154 |
| Cow position: | chr9:52510922-52511026 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 51-262 |
| Cow position: | chr9:1937910-1938129 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 131 |
| Conread position: | 53-261 |
| Cow position: | chr9:23840600-23840396 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 15, 114 |
| Conread position: | 54-280 |
| Cow position: | chr9:5155909-5156119 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 55-240 |
| Cow position: | chr9:8562610-8562799 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 23, 129 |
| Conread position: | 55-272 |
| Cow position: | chr9:23541588-23541383 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 55-275 |
| Cow position: | chr9:3847205-3847414 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 56-151 |
| Cow position: | chr9:26388029-26388123 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 56-261 |
| Cow position: | chr9:47955447-47955245 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 56-275 |
| Cow position: | chr9:44467559-44467327 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 57-155 |
| Cow position: | chr9:35932796-35932697 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 57-265 |
| Cow position: | chr9:11304278-11304073 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 5, 90 |
| Conread position: | 57-275 |
| Cow position: | chr9:16300760-16300557 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 58-152 |
| Cow position: | chr9:8629099-8629003 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 58-152 |
| Cow position: | chr9:28747706-28747609 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 58-153 |
| Cow position: | chr9:45141781-45141687 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 58-267 |
| Cow position: | chr9:29824832-29825033 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 58-268 |
| Cow position: | chr9:54677069-54677269 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 101 |
| Conread position: | 58-272 |
| Cow position: | chr9:34014456-34014240 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 58-281 |
| Cow position: | chr9:28295091-28295313 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 9, 73 |
| Conread position: | 58-284 |
| Cow position: | chr9:34811270-34811497 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 59-153 |
| Cow position: | chr9:45170571-45170474 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 59-208 |
| Cow position: | chr9:42986500-42986341 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 59-240 |
| Cow position: | chr9:17855605-17855775 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 59-240 |
| Cow position: | chr9:44526924-44527095 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 59, 97 |
| Conread position: | 59-241 |
| Cow position: | chr9:17360540-17360721 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 59-257 |
| Cow position: | chr9:1323865-1323665 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 59-261 |
| Cow position: | chr9:4268192-4267984 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 59-261 |
| Cow position: | chr9:18342529-18342731 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 59-261 |
| Cow position: | chr9:31694223-31694034 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 59-261 |
| Cow position: | chr9:34264900-34265093 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 59-261 |
| Cow position: | chr9:59699736-59699549 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 59-268 |
| Cow position: | chr9:46664609-46664833 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 59-272 |
| Cow position: | chr9:1751143-1751347 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 99 |
| Conread position: | 59-272 |
| Cow position: | chr9:9091293-9091096 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 58, 99 |
| Conread position: | 59-272 |
| Cow position: | chr9:23632849-23632642 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 59-272 |
| Cow position: | chr9:32858829-32858626 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 59-275 |
| Cow position: | chr9:30665185-30664976 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 60, 97 |
| Conread position: | 59-275 |
| Cow position: | chr9:33681452-33681671 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 60-231 |
| Cow position: | chr9:53553618-53553434 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 60-252 |
| Cow position: | chr9:13141344-13141527 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 62, 77 |
| Conread position: | 60-261 |
| Cow position: | chr9:32676494-32676675 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 60-268 |
| Cow position: | chr9:52513651-52513442 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 60-275 |
| Cow position: | chr9:26477028-26477228 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 86 |
| Conread position: | 60-275 |
| Cow position: | chr9:28686169-28686397 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 7, 168 |
| Conread position: | 60-278 |
| Cow position: | chr9:40005292-40005489 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 61-175 |
| Cow position: | chr9:2927566-2927679 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 61-220 |
| Cow position: | chr9:16770807-16770958 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 95 |
| Conread position: | 61-234 |
| Cow position: | chr9:9779593-9779761 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 61-260 |
| Cow position: | chr9:54611503-54611320 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 62-188 |
| Cow position: | chr9:36849447-36849574 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 62-233 |
| Cow position: | chr9:50202370-50202533 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 62-251 |
| Cow position: | chr9:41588659-41588851 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 63-240 |
| Cow position: | chr9:7362822-7363005 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 63-240 |
| Cow position: | chr9:35534180-35534022 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 63-261 |
| Cow position: | chr9:55354412-55354609 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 64-260 |
| Cow position: | chr9:10118846-10118662 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 78 |
| Conread position: | 64-275 |
| Cow position: | chr9:23403611-23403830 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 130 |
| Conread position: | 65-272 |
| Cow position: | chr9:46344746-46344945 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 80 |
| Conread position: | 66-269 |
| Cow position: | chr9:33597796-33597992 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 165 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 67-154 |
| Cow position: | chr9:11447984-11447896 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 78 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 67-275 |
| Cow position: | chr9:22374985-22375187 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 67-278 |
| Cow position: | chr9:34910258-34910047 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 68-239 |
| Cow position: | chr9:49225200-49225380 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 68-275 |
| Cow position: | chr9:47214724-47214533 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 69-196 |
| Cow position: | chr9:39577327-39577450 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 69-272 |
| Cow position: | chr9:52840076-52839872 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 70-213 |
| Cow position: | chr9:35540322-35540459 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 86 |
| Conread position: | 70-237 |
| Cow position: | chr9:8022926-8023100 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 9, 118 |
| Conread position: | 70-272 |
| Cow position: | chr9:8976610-8976400 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 188 |
| Conread position: | 70-275 |
| Cow position: | chr9:24243935-24243709 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 70-278 |
| Cow position: | chr9:46189941-46190157 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 71-261 |
| Cow position: | chr9:9686591-9686414 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 71-295 |
| Cow position: | chr9:42998743-42998512 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 178 |
| Conread position: | 72-175 |
| Cow position: | chr9:7951855-7951751 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 72-257 |
| Cow position: | chr9:18226922-18226741 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 72-261 |
| Cow position: | chr9:33114167-33114344 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 72-261 |
| Cow position: | chr9:52807593-52807406 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 72-269 |
| Cow position: | chr9:39681129-39681345 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 72-272 |
| Cow position: | chr9:39957147-39957339 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 72-272 |
| Cow position: | chr9:54716787-54716594 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 72-275 |
| Cow position: | chr9:9461839-9461645 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 72-278 |
| Cow position: | chr9:5073033-5072823 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 73-175 |
| Cow position: | chr9:22696003-22696106 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 73-272 |
| Cow position: | chr9:34484419-34484604 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 46 |
| Conread position: | 73-273 |
| Cow position: | chr9:8573213-8573404 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 74-275 |
| Cow position: | chr9:27345759-27345572 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 76-267 |
| Cow position: | chr9:36843615-36843798 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 76-275 |
| Cow position: | chr9:33940429-33940615 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 77-275 |
| Cow position: | chr9:18217290-18217087 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 39, 114 |
| Conread position: | 77-284 |
| Cow position: | chr9:41594303-41594104 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 78-272 |
| Cow position: | chr9:35167003-35167185 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 78-275 |
| Cow position: | chr9:11427478-11427671 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 82-216 |
| Cow position: | chr9:61966174-61966316 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 82-238 |
| Cow position: | chr9:43281481-43281635 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 87-253 |
| Cow position: | chr9:27698051-27697887 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 99 |
| Conread position: | 87-272 |
| Cow position: | chr9:7101277-7101451 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 87-275 |
| Cow position: | chr9:9753559-9753379 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 32, 6 |
| Conread position: | 88-240 |
| Cow position: | chr9:56772905-56773053 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 88-272 |
| Cow position: | chr9:38846497-38846324 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 57 |
| Conread position: | 88-275 |
| Cow position: | chr9:5407693-5407509 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 88-285 |
| Cow position: | chr9:31345321-31345523 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 93-283 |
| Cow position: | chr9:42482752-42482928 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 94-259 |
| Cow position: | chr9:54086187-54086019 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 104-272 |
| Cow position: | chr9:36849837-36850012 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 104-276 |
| Cow position: | chr9:1520904-1520724 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 105-275 |
| Cow position: | chr9:26310344-26310518 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 111-275 |
| Cow position: | chr9:42446128-42445971 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 128-272 |
| Cow position: | chr9:38645476-38645334 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 132-275 |
| Cow position: | chr9:39758386-39758530 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 132-275 |
| Cow position: | chr9:59386903-59386757 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 138-261 |
| Cow position: | chr9:6293470-6293593 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.