Cow genome map

Conread name: rplun0105_l16.y1

Conread position: 1-137
Cow position: chr12:7108932-7109071 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 1-137
Cow position: chr12:8922045-8921904 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-137
Cow position: chr12:37123257-37123390 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 1-137
Cow position: chr12:44766828-44766961 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-145
Cow position: chr12:36954631-36954487 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-149
Cow position: chr12:25805366-25805219 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 1-151
Cow position: chr12:23154723-23154569 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 147

Conread position: 1-151
Cow position: chr12:24755280-24755133 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 1-151
Cow position: chr12:39465322-39465475 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 105

Conread position: 1-154
Cow position: chr12:18123430-18123582 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 1-155
Cow position: chr12:3076879-3076719 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 1-157
Cow position: chr12:18388538-18388384 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 1-157
Cow position: chr12:19508828-19508666 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 1-157
Cow position: chr12:40307440-40307597 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 103

Conread position: 1-158
Cow position: chr12:20316763-20316612 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 105, 56

Conread position: 1-158
Cow position: chr12:41083809-41083969 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 111

Conread position: 1-160
Cow position: chr12:31925394-31925550 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 124

Conread position: 1-160
Cow position: chr12:42167389-42167550 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 87

Conread position: 1-162
Cow position: chr12:12178665-12178826 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 58, 72

Conread position: 1-162
Cow position: chr12:17031365-17031519 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 1-164
Cow position: chr12:3880512-3880346 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 113

Conread position: 1-164
Cow position: chr12:30662206-30662041 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 1-165
Cow position: chr12:941376-941544 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-165
Cow position: chr12:3055881-3056039 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 110

Conread position: 1-165
Cow position: chr12:17007941-17008111 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 109

Conread position: 1-165
Cow position: chr12:19154867-19154708 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 50

Conread position: 1-165
Cow position: chr12:28804737-28804903 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 57, 110

Conread position: 1-165
Cow position: chr12:30728495-30728328 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 111

Conread position: 1-165
Cow position: chr12:31228318-31228481 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 89, 81

Conread position: 1-165
Cow position: chr12:42160813-42160639 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1-168
Cow position: chr12:18421183-18421015 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 105

Conread position: 1-168
Cow position: chr12:31841181-31841352 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 1-173
Cow position: chr12:4134408-4134588 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-175
Cow position: chr12:9482555-9482384 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 100

Conread position: 1-175
Cow position: chr12:18040847-18040677 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 48

Conread position: 1-175
Cow position: chr12:18769330-18769154 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 123, 101

Conread position: 1-175
Cow position: chr12:19039868-19039690 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-175
Cow position: chr12:34385770-34385594 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 65

Conread position: 1-175
Cow position: chr12:42283093-42282914 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 58, 47

Conread position: 1-176
Cow position: chr12:4182952-4182770 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 1-176
Cow position: chr12:22047213-22047392 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 127

Conread position: 1-176
Cow position: chr12:32169280-32169459 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 1-177
Cow position: chr12:1848794-1848613 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 113

Conread position: 1-180
Cow position: chr12:3579023-3579208 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 106

Conread position: 1-181
Cow position: chr12:3070854-3071035 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 42

Conread position: 1-181
Cow position: chr12:6241053-6241236 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 117

Conread position: 1-181
Cow position: chr12:37993982-37993798 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 105

Conread position: 1-182
Cow position: chr12:2286325-2286512 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 78

Conread position: 1-182
Cow position: chr12:3994693-3994882 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 1-182
Cow position: chr12:5905801-5905980 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 166, 83

Conread position: 1-182
Cow position: chr12:5940087-5940274 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 1-182
Cow position: chr12:18937131-18937328 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 1-182
Cow position: chr12:19420188-19420009 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 21

Conread position: 1-182
Cow position: chr12:24032750-24032932 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 149, 74

Conread position: 1-182
Cow position: chr12:25455858-25456043 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 1-182
Cow position: chr12:25561114-25561296 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 103

Conread position: 1-182
Cow position: chr12:27563637-27563453 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 103, 37

Conread position: 1-182
Cow position: chr12:29162067-29161889 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 1-182
Cow position: chr12:31959638-31959813 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 56

Conread position: 1-182
Cow position: chr12:32714786-32714970 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 103

Conread position: 1-182
Cow position: chr12:34007043-34007231 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 146

Conread position: 1-182
Cow position: chr12:35771288-35771093 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 1-182
Cow position: chr12:40110133-40110309 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 166, 55

Conread position: 1-182
Cow position: chr12:40270342-40270166 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 106, 31

Conread position: 1-182
Cow position: chr12:44014096-44013910 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 128

Conread position: 1-184
Cow position: chr12:1284714-1284532 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 102, 72

Conread position: 1-185
Cow position: chr12:2711236-2711425 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 105, 0

Conread position: 1-185
Cow position: chr12:3510307-3510492 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 58, 114

Conread position: 1-185
Cow position: chr12:5714372-5714557 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 166, 101

Conread position: 1-185
Cow position: chr12:5800779-5800962 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 166, 47

Conread position: 1-185
Cow position: chr12:6210413-6210228 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 165, 99

Conread position: 1-185
Cow position: chr12:8943476-8943293 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 32

Conread position: 1-185
Cow position: chr12:9914533-9914718 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 55

Conread position: 1-185
Cow position: chr12:17472476-17472297 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 165, 61

Conread position: 1-185
Cow position: chr12:17702489-17702299 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 60, 118

Conread position: 1-185
Cow position: chr12:19715284-19715111 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 165, 50

Conread position: 1-185
Cow position: chr12:24107794-24107616 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 48

Conread position: 1-185
Cow position: chr12:32391589-32391778 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 104

Conread position: 1-185
Cow position: chr12:33323755-33323566 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 105

Conread position: 1-185
Cow position: chr12:47928959-47929142 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 105, 145

Conread position: 1-187
Cow position: chr12:42181397-42181207 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 89

Conread position: 1-194
Cow position: chr12:19865986-19866179 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 166, 86

Conread position: 1-195
Cow position: chr12:6164285-6164087 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 60, 105

Conread position: 1-197
Cow position: chr12:19691494-19691294 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 105

Conread position: 1-197
Cow position: chr12:31532660-31532467 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 36, 28

Conread position: 1-198
Cow position: chr12:42254402-42254609 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 193

Conread position: 1-200
Cow position: chr12:20326514-20326718 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 58, 111

Conread position: 1-205
Cow position: chr12:8869139-8868928 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 113

Conread position: 1-205
Cow position: chr12:15938523-15938316 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 166, 0

Conread position: 1-205
Cow position: chr12:41473839-41474036 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 1-209
Cow position: chr12:9414024-9413828 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 166, 61

Conread position: 1-226
Cow position: chr12:40910547-40910321 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 73

Conread position: 1-227
Cow position: chr12:44596070-44595841 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 110

Conread position: 1-236
Cow position: chr12:46143565-46143800 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 101, 179

Conread position: 1-302
Cow position: chr12:22261066-22260767 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 166, 30

Conread position: 1-326
Cow position: chr12:17495448-17495129 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 142, 134

Conread position: 1-335
Cow position: chr12:29411745-29411421 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 85, 70

Conread position: 1-346
Cow position: chr12:11835986-11836319 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 166, 39

Conread position: 1-349
Cow position: chr12:6410984-6410644 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 231
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 165, 70

Conread position: 2-144
Cow position: chr12:9465715-9465568 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 2-162
Cow position: chr12:34148606-34148445 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 44

Conread position: 2-164
Cow position: chr12:28011154-28010993 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 2-165
Cow position: chr12:37727892-37728047 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 2-165
Cow position: chr12:37733032-37732877 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 2-169
Cow position: chr12:37770620-37770787 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 59

Conread position: 2-181
Cow position: chr12:27563092-27562904 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 2-183
Cow position: chr12:40158495-40158311 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 2-227
Cow position: chr12:35368388-35368611 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 164, 60

Conread position: 2-340
Cow position: chr12:29969321-29969658 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 121

Conread position: 3-164
Cow position: chr12:42966746-42966905 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 143, 99

Conread position: 3-165
Cow position: chr12:26869053-26868887 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 3-165
Cow position: chr12:35218659-35218497 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 109, 67

Conread position: 3-165
Cow position: chr12:42698477-42698315 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 99

Conread position: 3-170
Cow position: chr12:4008537-4008366 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 13

Conread position: 3-173
Cow position: chr12:3568692-3568862 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 48

Conread position: 3-175
Cow position: chr12:45814519-45814339 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 3-182
Cow position: chr12:5635702-5635523 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 106

Conread position: 3-182
Cow position: chr12:15240978-15240797 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 153, 96

Conread position: 3-185
Cow position: chr12:6720065-6720252 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 109

Conread position: 3-185
Cow position: chr12:25320669-25320850 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 164, 71

Conread position: 3-203
Cow position: chr12:41214576-41214378 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 169, 99

Conread position: 3-227
Cow position: chr12:3950605-3950376 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 156

Conread position: 4-151
Cow position: chr12:26782628-26782781 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 4-175
Cow position: chr12:36501205-36501027 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 150

Conread position: 4-181
Cow position: chr12:6226900-6226725 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 33

Conread position: 4-182
Cow position: chr12:44517988-44517810 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 162, 12

Conread position: 4-185
Cow position: chr12:30805605-30805783 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 162, 58

Conread position: 4-186
Cow position: chr12:28650699-28650885 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 86

Conread position: 5-168
Cow position: chr12:29770824-29770663 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 6-177
Cow position: chr12:41580861-41581039 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 6-182
Cow position: chr12:23574519-23574688 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 161, 93

Conread position: 7-181
Cow position: chr12:28213268-28213440 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 7-182
Cow position: chr12:12017626-12017804 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 7-182
Cow position: chr12:12700025-12699839 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 7-182
Cow position: chr12:19869221-19869395 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 162, 49

Conread position: 7-185
Cow position: chr12:1773917-1773736 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 79

Conread position: 7-185
Cow position: chr12:27803300-27803124 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 97

Conread position: 8-194
Cow position: chr12:44905390-44905582 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 140

Conread position: 9-163
Cow position: chr12:29484138-29483986 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 66

Conread position: 9-181
Cow position: chr12:30753474-30753648 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 109, 65

Conread position: 9-196
Cow position: chr12:18766229-18766038 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 73

Conread position: 10-185
Cow position: chr12:29995708-29995532 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 65, 99

Conread position: 10-197
Cow position: chr12:33457900-33458086 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 160, 45

Conread position: 11-182
Cow position: chr12:24211170-24211338 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 95

Conread position: 15-185
Cow position: chr12:17881624-17881790 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 36

Conread position: 15-185
Cow position: chr12:40028997-40028828 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 44

Conread position: 16-163
Cow position: chr12:24180656-24180802 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 43

Conread position: 17-185
Cow position: chr12:12031075-12030902 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 19-163
Cow position: chr12:30476239-30476387 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 21-160
Cow position: chr12:5459027-5459166 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 127

Conread position: 21-182
Cow position: chr12:15162914-15163076 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 146, 94

Conread position: 22-227
Cow position: chr12:4162606-4162394 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 117

Conread position: 24-176
Cow position: chr12:21486351-21486505 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 138, 85

Conread position: 24-194
Cow position: chr12:38512075-38511900 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 32-181
Cow position: chr12:3906243-3906398 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 33-175
Cow position: chr12:25820657-25820511 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 115

Conread position: 33-181
Cow position: chr12:18021369-18021520 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 33-198
Cow position: chr12:28748710-28748879 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 60

Conread position: 39-176
Cow position: chr12:24440601-24440739 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 40

Conread position: 42-222
Cow position: chr12:29694262-29694082 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 45

Conread position: 48-185
Cow position: chr12:30210273-30210409 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 51-185
Cow position: chr12:31429776-31429641 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 51

Conread position: 56-173
Cow position: chr12:31882147-31882264 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 111, 46

Conread position: 59-332
Cow position: chr12:47086228-47085943 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 111

Conread position: 62-165
Cow position: chr12:32334203-32334100 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 65-182
Cow position: chr12:25444733-25444852 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 22

Conread position: 71-185
Cow position: chr12:7000791-7000675 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 74-205
Cow position: chr12:15050798-15050669 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 12

Conread position: 130-333
Cow position: chr12:20654512-20654309 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 116, 21

Conread position: 131-324
Cow position: chr12:6687854-6688048 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 60, 16

Conread position: 152-317
Cow position: chr12:1701825-1701658 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 18

Conread position: 172-326
Cow position: chr12:40158028-40157863 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 193-310
Cow position: chr12:30194722-30194842 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 103

Conread position: 193-326
Cow position: chr12:24639655-24639793 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 48

Conread position: 193-326
Cow position: chr12:45126825-45126695 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 193-329
Cow position: chr12:39431594-39431737 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 108

Conread position: 193-335
Cow position: chr12:7902778-7902633 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 44

Conread position: 194-310
Cow position: chr12:3616019-3616132 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 194-317
Cow position: chr12:43854915-43855046 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 194-318
Cow position: chr12:30805880-30806010 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 194-325
Cow position: chr12:34465982-34465854 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 194-326
Cow position: chr12:2805052-2804920 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 43

Conread position: 194-326
Cow position: chr12:6666592-6666726 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 194-326
Cow position: chr12:9229478-9229351 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 194-326
Cow position: chr12:34161435-34161568 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 105

Conread position: 194-327
Cow position: chr12:22859485-22859616 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 73

Conread position: 194-328
Cow position: chr12:44822314-44822449 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 194-329
Cow position: chr12:4801388-4801521 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 194-331
Cow position: chr12:4768947-4769089 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 194-334
Cow position: chr12:17250533-17250678 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 194-334
Cow position: chr12:38804568-38804432 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 194-337
Cow position: chr12:17702007-17701859 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 194-337
Cow position: chr12:27803028-27802883 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 123

Conread position: 194-338
Cow position: chr12:24023780-24023638 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 124

Conread position: 194-340
Cow position: chr12:26217802-26217650 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 94

Conread position: 194-340
Cow position: chr12:38774221-38774070 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 53, 134

Conread position: 194-345
Cow position: chr12:5635431-5635266 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 195-308
Cow position: chr12:31517148-31517036 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 195-326
Cow position: chr12:37008684-37008545 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 195-329
Cow position: chr12:30210506-30210638 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 196-303
Cow position: chr12:17622395-17622284 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 196-319
Cow position: chr12:26575920-26576050 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 196-326
Cow position: chr12:24181171-24181308 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 197-319
Cow position: chr12:29321246-29321126 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 197-324
Cow position: chr12:5714654-5714781 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 31

Conread position: 197-338
Cow position: chr12:1333256-1333395 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 126, 40

Conread position: 206-348
Cow position: chr12:27421487-27421639 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.