Cow genome map

Conread name: rplun0105_l16.y1

Conread position: 1-160
Cow position: chr24:6900582-6900743 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 1-160
Cow position: chr24:14279646-14279810 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-160
Cow position: chr24:39493055-39493211 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 1-161
Cow position: chr24:38375042-38375202 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 109

Conread position: 1-162
Cow position: chr24:15057160-15057319 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 85, 58

Conread position: 1-162
Cow position: chr24:18374532-18374696 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 105

Conread position: 1-163
Cow position: chr24:5754599-5754757 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 1-164
Cow position: chr24:18734597-18734431 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 16

Conread position: 1-164
Cow position: chr24:40908774-40908942 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 31

Conread position: 1-165
Cow position: chr24:2730812-2730652 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 147, 0

Conread position: 1-165
Cow position: chr24:18474990-18474824 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 25

Conread position: 1-165
Cow position: chr24:25320747-25320917 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 1-165
Cow position: chr24:25950909-25950745 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 126

Conread position: 1-165
Cow position: chr24:30177994-30178156 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 1-165
Cow position: chr24:30314278-30314108 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-165
Cow position: chr24:30776910-30776744 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 58, 72

Conread position: 1-165
Cow position: chr24:41980907-41980740 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 50

Conread position: 1-165
Cow position: chr24:42345251-42345081 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 1-166
Cow position: chr24:24137093-24136933 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 147, 31

Conread position: 1-167
Cow position: chr24:21252692-21252525 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 112

Conread position: 1-168
Cow position: chr24:211739-211909 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 111

Conread position: 1-168
Cow position: chr24:5141698-5141868 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 57, 105

Conread position: 1-168
Cow position: chr24:24250490-24250652 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 1-168
Cow position: chr24:41755621-41755787 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 6

Conread position: 1-169
Cow position: chr24:16994651-16994811 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 50

Conread position: 1-169
Cow position: chr24:29027804-29027969 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 1-175
Cow position: chr24:3631275-3631442 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 165, 29

Conread position: 1-175
Cow position: chr24:15473113-15473294 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 1-175
Cow position: chr24:21264753-21264575 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 1-175
Cow position: chr24:21860463-21860290 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 84

Conread position: 1-175
Cow position: chr24:25677792-25677971 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 40

Conread position: 1-175
Cow position: chr24:35405813-35405632 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 1-176
Cow position: chr24:20970034-20969865 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 165, 55

Conread position: 1-176
Cow position: chr24:36486302-36486125 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 19

Conread position: 1-177
Cow position: chr24:6677261-6677447 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 91, 32

Conread position: 1-177
Cow position: chr24:18324374-18324557 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 1-180
Cow position: chr24:11839936-11840127 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 1-181
Cow position: chr24:31324038-31324221 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 19

Conread position: 1-182
Cow position: chr24:6487678-6487857 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 39

Conread position: 1-182
Cow position: chr24:11886915-11887098 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 105

Conread position: 1-182
Cow position: chr24:18390531-18390348 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 164, 0

Conread position: 1-182
Cow position: chr24:25229300-25229117 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 101

Conread position: 1-182
Cow position: chr24:25424821-25424997 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 166, 73

Conread position: 1-182
Cow position: chr24:33944165-33944343 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 165, 38

Conread position: 1-182
Cow position: chr24:43733727-43733911 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 102

Conread position: 1-184
Cow position: chr24:27941250-27941067 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 73, 31

Conread position: 1-185
Cow position: chr24:2675087-2675263 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 160, 72

Conread position: 1-185
Cow position: chr24:3152819-3152638 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 55

Conread position: 1-185
Cow position: chr24:5151991-5152176 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 74

Conread position: 1-185
Cow position: chr24:17104808-17104629 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 166, 61

Conread position: 1-185
Cow position: chr24:17955690-17955498 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 1-185
Cow position: chr24:18405549-18405377 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 166, 8

Conread position: 1-185
Cow position: chr24:19769256-19769431 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 38

Conread position: 1-185
Cow position: chr24:27267393-27267577 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 99, 55

Conread position: 1-185
Cow position: chr24:27719995-27719812 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 166, 40

Conread position: 1-185
Cow position: chr24:27809940-27810130 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 1-185
Cow position: chr24:27906192-27906381 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 129

Conread position: 1-185
Cow position: chr24:27967838-27968021 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 166, 60

Conread position: 1-185
Cow position: chr24:28062703-28062894 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 114

Conread position: 1-185
Cow position: chr24:28721646-28721834 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 8

Conread position: 1-185
Cow position: chr24:29389004-29389184 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 166, 61

Conread position: 1-185
Cow position: chr24:29673277-29673462 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 157, 177

Conread position: 1-185
Cow position: chr24:29679553-29679366 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 142

Conread position: 1-185
Cow position: chr24:29781919-29782108 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 43

Conread position: 1-185
Cow position: chr24:30484186-30484007 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 166, 55

Conread position: 1-185
Cow position: chr24:32205036-32204851 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 166, 101

Conread position: 1-185
Cow position: chr24:33098730-33098542 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 55

Conread position: 1-185
Cow position: chr24:34742507-34742695 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 1-185
Cow position: chr24:35794982-35794796 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 111

Conread position: 1-185
Cow position: chr24:40055964-40055786 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 78

Conread position: 1-185
Cow position: chr24:42825740-42825551 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 111

Conread position: 1-185
Cow position: chr24:44041251-44041068 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 108, 61

Conread position: 1-186
Cow position: chr24:27052737-27052550 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 109, 85

Conread position: 1-189
Cow position: chr24:35073850-35074040 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 166, 0

Conread position: 1-194
Cow position: chr24:37205121-37204926 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 126

Conread position: 1-195
Cow position: chr24:39258922-39259111 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 102

Conread position: 1-196
Cow position: chr24:2096131-2095936 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 166, 101

Conread position: 1-197
Cow position: chr24:19658306-19658511 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 195

Conread position: 1-202
Cow position: chr24:11876641-11876844 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 61, 109

Conread position: 1-203
Cow position: chr24:20942927-20943125 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 31

Conread position: 1-222
Cow position: chr24:27207437-27207217 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 161, 180

Conread position: 1-225
Cow position: chr24:15508777-15508557 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 72, 32

Conread position: 1-227
Cow position: chr24:7917611-7917378 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 198

Conread position: 1-227
Cow position: chr24:28553787-28553571 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 43

Conread position: 1-227
Cow position: chr24:42007503-42007723 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 165, 60

Conread position: 1-227
Cow position: chr24:42103132-42103357 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 19

Conread position: 2-160
Cow position: chr24:5435288-5435128 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 2-162
Cow position: chr24:3430494-3430651 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 2-164
Cow position: chr24:34532882-34533048 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 2-173
Cow position: chr24:11006974-11007151 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 2-176
Cow position: chr24:39483232-39483411 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 104

Conread position: 2-181
Cow position: chr24:27543717-27543538 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 167, 106

Conread position: 2-181
Cow position: chr24:28699816-28699989 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 134, 0

Conread position: 2-181
Cow position: chr24:39219088-39218903 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 2-185
Cow position: chr24:33724092-33723903 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 113

Conread position: 2-185
Cow position: chr24:40184383-40184568 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 56, 5

Conread position: 2-187
Cow position: chr24:814506-814326 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 165, 100

Conread position: 2-226
Cow position: chr24:40129881-40130110 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 97, 191

Conread position: 2-227
Cow position: chr24:27149156-27149382 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 163, 81

Conread position: 2-227
Cow position: chr24:34315116-34315339 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 102, 49

Conread position: 3-160
Cow position: chr24:17159506-17159667 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 3-160
Cow position: chr24:20024367-20024532 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 3-161
Cow position: chr24:18266412-18266248 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 3-162
Cow position: chr24:43371008-43371165 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 76

Conread position: 3-165
Cow position: chr24:32693462-32693626 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 126

Conread position: 3-165
Cow position: chr24:33238788-33238621 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 108, 133

Conread position: 3-165
Cow position: chr24:39440797-39440633 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 103, 0

Conread position: 3-166
Cow position: chr24:29596056-29595888 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 3-168
Cow position: chr24:7913758-7913928 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 3-168
Cow position: chr24:37246458-37246287 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 3-175
Cow position: chr24:18974960-18975134 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 164, 0

Conread position: 3-175
Cow position: chr24:27341264-27341088 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 126

Conread position: 3-176
Cow position: chr24:34761653-34761831 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 3-179
Cow position: chr24:27874364-27874539 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 103, 53

Conread position: 3-182
Cow position: chr24:6340777-6340952 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 48

Conread position: 3-182
Cow position: chr24:29170725-29170909 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 99, 136

Conread position: 3-184
Cow position: chr24:18741811-18741628 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 164, 0

Conread position: 3-185
Cow position: chr24:24755209-24755386 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 76

Conread position: 3-185
Cow position: chr24:30545096-30544916 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 58

Conread position: 3-185
Cow position: chr24:32370150-32369975 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 164, 48

Conread position: 3-185
Cow position: chr24:43364123-43364302 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 164, 29

Conread position: 3-187
Cow position: chr24:11119042-11119230 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 48

Conread position: 3-187
Cow position: chr24:36555070-36554891 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 132, 72

Conread position: 3-192
Cow position: chr24:20874436-20874629 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 103

Conread position: 3-195
Cow position: chr24:14617416-14617607 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 124, 50

Conread position: 4-185
Cow position: chr24:40849919-40850107 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 4-187
Cow position: chr24:43432562-43432738 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 162, 34

Conread position: 4-197
Cow position: chr24:18485239-18485043 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 57, 76

Conread position: 4-198
Cow position: chr24:10671146-10671348 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 4-227
Cow position: chr24:15861840-15861615 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 162, 0

Conread position: 5-165
Cow position: chr24:18343810-18343973 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 5-175
Cow position: chr24:38347442-38347618 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 6-175
Cow position: chr24:25194029-25194203 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 52, 70

Conread position: 6-188
Cow position: chr24:18695384-18695566 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 161, 71

Conread position: 7-169
Cow position: chr24:37650434-37650596 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 136, 95

Conread position: 7-182
Cow position: chr24:3493656-3493826 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 160, 95

Conread position: 7-182
Cow position: chr24:19535484-19535314 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 160, 44

Conread position: 9-164
Cow position: chr24:17294421-17294271 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 9-175
Cow position: chr24:591676-591847 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 9-182
Cow position: chr24:33222174-33222002 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 158, 48

Conread position: 9-227
Cow position: chr24:19466168-19465934 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 10-127
Cow position: chr24:6742082-6741962 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 12-156
Cow position: chr24:20250135-20249985 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 16-185
Cow position: chr24:24457474-24457306 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 148

Conread position: 19-180
Cow position: chr24:21519215-21519372 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 28

Conread position: 19-182
Cow position: chr24:20792295-20792130 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 98

Conread position: 22-185
Cow position: chr24:16509751-16509914 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 145, 31

Conread position: 26-181
Cow position: chr24:885901-885748 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 48

Conread position: 30-182
Cow position: chr24:5912-5756 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 82

Conread position: 33-165
Cow position: chr24:22079246-22079383 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 33-349
Cow position: chr24:15373199-15373507 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 75

Conread position: 36-165
Cow position: chr24:352812-352684 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 37-182
Cow position: chr24:28253500-28253643 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 63

Conread position: 38-160
Cow position: chr24:29708009-29707881 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 48-181
Cow position: chr24:34008773-34008637 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 48-275
Cow position: chr24:18970700-18970480 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 118, 25

Conread position: 52-227
Cow position: chr24:30226749-30226923 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 139

Conread position: 56-185
Cow position: chr24:41423422-41423552 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 113, 52

Conread position: 57-182
Cow position: chr24:32070780-32070906 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 51

Conread position: 58-181
Cow position: chr24:19800661-19800785 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 109, 84

Conread position: 59-177
Cow position: chr24:18355038-18355157 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 89

Conread position: 62-194
Cow position: chr24:17832995-17832861 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 62-205
Cow position: chr24:16895617-16895476 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 63-318
Cow position: chr24:17938581-17938852 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 10, 29

Conread position: 67-197
Cow position: chr24:25092354-25092487 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 113

Conread position: 67-304
Cow position: chr24:42023198-42022968 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 136

Conread position: 69-185
Cow position: chr24:35576709-35576590 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 72-186
Cow position: chr24:6450326-6450441 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 7

Conread position: 132-326
Cow position: chr24:22999993-23000180 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 40

Conread position: 132-335
Cow position: chr24:19186918-19187121 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 117, 39

Conread position: 134-316
Cow position: chr24:5360697-5360880 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 112, 48

Conread position: 153-326
Cow position: chr24:32891042-32890867 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 19

Conread position: 174-318
Cow position: chr24:13114770-13114913 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 71

Conread position: 187-318
Cow position: chr24:2223183-2223050 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 194-316
Cow position: chr24:15246607-15246489 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 87

Conread position: 194-319
Cow position: chr24:16510013-16510143 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 113

Conread position: 194-325
Cow position: chr24:34396143-34396012 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 94

Conread position: 194-325
Cow position: chr24:43832564-43832700 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 194-326
Cow position: chr24:6677682-6677814 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 51

Conread position: 194-326
Cow position: chr24:24136367-24136229 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 194-326
Cow position: chr24:27713369-27713231 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 194-327
Cow position: chr24:28303319-28303182 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 194-328
Cow position: chr24:3493920-3494062 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 194-330
Cow position: chr24:28553528-28553389 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 60, 103

Conread position: 194-334
Cow position: chr24:7777593-7777449 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 104

Conread position: 194-334
Cow position: chr24:27844492-27844344 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 194-335
Cow position: chr24:25971040-25970896 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 194-335
Cow position: chr24:37037938-37038081 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 125, 0

Conread position: 194-338
Cow position: chr24:27719491-27719340 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 55, 144

Conread position: 194-346
Cow position: chr24:39523413-39523253 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 135

Conread position: 194-358
Cow position: chr24:31383151-31383320 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 97

Conread position: 194-363
Cow position: chr24:43349603-43349431 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 195-326
Cow position: chr24:1269820-1269956 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 195-333
Cow position: chr24:29524348-29524204 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 195-336
Cow position: chr24:42876854-42876714 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 120

Conread position: 195-340
Cow position: chr24:27940585-27940435 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 195-340
Cow position: chr24:39483513-39483653 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 196-310
Cow position: chr24:38841384-38841270 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 196-326
Cow position: chr24:2730578-2730447 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 196-328
Cow position: chr24:27810195-27810330 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 52, 101

Conread position: 196-339
Cow position: chr24:230321-230470 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 131

Conread position: 196-362
Cow position: chr24:41925860-41926029 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 95

Conread position: 197-321
Cow position: chr24:32974558-32974430 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 197-335
Cow position: chr24:13353078-13353214 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 197-356
Cow position: chr24:24755486-24755640 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 136, 38

Conread position: 201-311
Cow position: chr24:11034572-11034678 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 202-340
Cow position: chr24:31160994-31160850 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 121

Conread position: 205-339
Cow position: chr24:28721931-28722069 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 217-325
Cow position: chr24:21895330-21895439 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.