Cow genome map

Conread name: rplun0105_l16.y1

Conread position: 1-137
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 1-138
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 1-158
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 1-162
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 105

Conread position: 1-162
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 1-164
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 1-164
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 142

Conread position: 1-165
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 129

Conread position: 1-165
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 1-165
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 58, 150

Conread position: 1-166
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 32

Conread position: 1-167
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 58

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-168
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 105

Conread position: 1-169
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 1-169
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 72, 167

Conread position: 1-172
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 134

Conread position: 1-173
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 1-175
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 1-175
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 61

Conread position: 1-175
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 165, 6

Conread position: 1-176
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-177
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 6

Conread position: 1-177
Cow position:
Alignm length: 183
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 101, 47

Conread position: 1-177
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 1-180
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 108, 76

Conread position: 1-180
Cow position:
Alignm length: 186
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 1-180
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 166, 101

Conread position: 1-181
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 166, 32

Conread position: 1-181
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 78

Conread position: 1-181
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 166, 6

Conread position: 1-181
Cow position:
Alignm length: 184
Alignm identity: 148
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 109, 76

Conread position: 1-182
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 167, 106

Conread position: 1-182
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 104

Conread position: 1-182
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 166, 61

Conread position: 1-182
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 165, 60

Conread position: 1-182
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 76

Conread position: 1-182
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 66

Conread position: 1-182
Cow position:
Alignm length: 186
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 103

Conread position: 1-182
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 43

Conread position: 1-182
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 92, 58

Conread position: 1-182
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 1-183
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 58, 112

Conread position: 1-185
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 55

Conread position: 1-185
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 31

Conread position: 1-185
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 84

Conread position: 1-185
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 166, 61

Conread position: 1-185
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 166, 137

Conread position: 1-185
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 165, 35

Conread position: 1-185
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 58, 86

Conread position: 1-195
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 166, 64

Conread position: 1-195
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 46

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 108

Conread position: 1-227
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 152, 62

Conread position: 1-227
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 103, 31

Conread position: 1-227
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 103, 31

Conread position: 1-228
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 39

Conread position: 2-141
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 2-165
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 104

Conread position: 2-182
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 2-185
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 152, 55

Conread position: 2-185
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 111

Conread position: 2-185
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 164, 46

Conread position: 2-199
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 3-160
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 74

Conread position: 3-160
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 72

Conread position: 3-165
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 108

Conread position: 3-168
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 103

Conread position: 3-180
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 167, 59

Conread position: 3-181
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 91

Conread position: 3-182
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 3-182
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 34

Conread position: 3-182
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 17

Conread position: 3-185
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 58, 161

Conread position: 3-185
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 149, 81

Conread position: 3-185
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 164, 41

Conread position: 3-194
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 186

Conread position: 4-185
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 55, 101

Conread position: 4-185
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 5-198
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 165, 51

Conread position: 5-343
Cow position:
Alignm length: 346
Alignm identity: 224
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 80

Conread position: 7-185
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 7-185
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 12-138
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 14-185
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 16-227
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 151, 37

Conread position: 17-182
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 17-185
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 58

Conread position: 19-185
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 21-170
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 145, 0

Conread position: 24-227
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 23

Conread position: 28-197
Cow position:
Alignm length: 178
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 84

Conread position: 33-182
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 133, 0

Conread position: 33-182
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 133, 15

Conread position: 34-181
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 43-182
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 71

Conread position: 53-180
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 74

Conread position: 62-185
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 67-185
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 87-182
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 132-326
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 25

Conread position: 134-319
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 36

Conread position: 188-345
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 108

Conread position: 193-326
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 194-321
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 194-321
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 194-324
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 102

Conread position: 194-326
Cow position:
Alignm length: 134
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 17

Conread position: 194-326
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 194-326
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 22

Conread position: 194-326
Cow position:
Alignm length: 141
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 194-326
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 194-326
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 194-335
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 194-336
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 88

Conread position: 194-337
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 125, 0

Conread position: 194-337
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 127

Conread position: 194-338
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 130

Conread position: 194-338
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 10

Conread position: 194-338
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 29

Conread position: 194-339
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 22

Conread position: 194-339
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 194-341
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 194-342
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 147

Conread position: 194-344
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 59

Conread position: 194-346
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 137

Conread position: 195-319
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 195-326
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 195-328
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 195-335
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 195-337
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 196-318
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 196-324
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 31

Conread position: 196-325
Cow position:
Alignm length: 136
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 33

Conread position: 196-336
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 198-325
Cow position:
Alignm length: 128
Alignm identity: 107
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 203-331
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 117

Conread position: 203-349
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 24

Show alignments to all cow chromosomes.