Non-Coding RNA Search

Cow genome map


           Conread name:
           rplun0113_m6.y1
        

               Conread position:
               196-461
               

               Cow position:
               chr13:47243820-47243548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 75
               

               Conread position:
               208-445
               

               Cow position:
               chr13:53850563-53850815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               210-433
               

               Cow position:
               chr13:21246965-21246731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               124, 36
               

               Conread position:
               210-524
               

               Cow position:
               chr13:12045598-12045271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               113, 37
               

               Conread position:
               212-428
               

               Cow position:
               chr13:13797065-13796838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               110, 22
               

               Conread position:
               214-366
               

               Cow position:
               chr13:38683275-38683116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               215-374
               

               Cow position:
               chr13:48165989-48165835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               215-446
               

               Cow position:
               chr13:9124675-9124917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               9, 110
               

               Conread position:
               216-470
               

               Cow position:
               chr13:8779006-8779258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 141
               

               Conread position:
               217-332
               

               Cow position:
               chr13:8354932-8355047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               217-423
               

               Cow position:
               chr13:8537574-8537790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               106, 16
               

               Conread position:
               218-369
               

               Cow position:
               chr13:53847364-53847215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               218-434
               

               Cow position:
               chr13:11146807-11147035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               220-460
               

               Cow position:
               chr13:25604849-25604615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               31, 42
               

               Conread position:
               220-524
               

               Cow position:
               chr13:10925168-10924849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               221-370
               

               Cow position:
               chr13:62304325-62304478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               221-374
               

               Cow position:
               chr13:26097936-26098092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               221-430
               

               Cow position:
               chr13:15162878-15162660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               98, 201
               

               Conread position:
               221-511
               

               Cow position:
               chr13:151728-152011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               151, 61
               

               Conread position:
               222-430
               

               Cow position:
               chr13:3149675-3149458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               26, 202
               

               Conread position:
               222-444
               

               Cow position:
               chr13:57770226-57769999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               26, 112
               

               Conread position:
               222-524
               

               Cow position:
               chr13:5758573-5758277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               126, 55
               

               Conread position:
               223-442
               

               Cow position:
               chr13:3594090-3594309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               33, 146
               

               Conread position:
               223-464
               

               Cow position:
               chr13:52536329-52536574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 87
               

               Conread position:
               224-339
               

               Cow position:
               chr13:20654101-20653982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               224-461
               

               Cow position:
               chr13:49795799-49796030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               99, 146
               

               Conread position:
               224-468
               

               Cow position:
               chr13:3209565-3209307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 243
               

               Conread position:
               224-511
               

               Cow position:
               chr13:35557352-35557054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 271
               

               Conread position:
               224-524
               

               Cow position:
               chr13:7148996-7149292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               25, 65
               

               Conread position:
               224-524
               

               Cow position:
               chr13:37593187-37592879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               27, 61
               

               Conread position:
               224-524
               

               Cow position:
               chr13:43479824-43480121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               225-496
               

               Cow position:
               chr13:57475659-57475379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               23, 193
               

               Conread position:
               225-524
               

               Cow position:
               chr13:5911126-5910836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               151, 8
               

               Conread position:
               226-373
               

               Cow position:
               chr13:25924469-25924312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               226-469
               

               Cow position:
               chr13:9707983-9707734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               227-421
               

               Cow position:
               chr13:48126868-48127074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               227-422
               

               Cow position:
               chr13:10757904-10758095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 114
               

               Conread position:
               227-439
               

               Cow position:
               chr13:51249615-51249395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               227-469
               

               Cow position:
               chr13:6865902-6865647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               227-472
               

               Cow position:
               chr13:48439761-48439529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               227-519
               

               Cow position:
               chr13:46111730-46112025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               227-524
               

               Cow position:
               chr13:25579426-25579124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               100, 42
               

               Conread position:
               228-365
               

               Cow position:
               chr13:41550041-41549904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               228-411
               

               Cow position:
               chr13:43576775-43576970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               228-468
               

               Cow position:
               chr13:12974581-12974828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               228-524
               

               Cow position:
               chr13:20137580-20137888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               34, 251
               

               Conread position:
               228-524
               

               Cow position:
               chr13:21275621-21275921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               90, 66
               

               Conread position:
               229-434
               

               Cow position:
               chr13:31507675-31507464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               230-369
               

               Cow position:
               chr13:47613091-47612955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               230-523
               

               Cow position:
               chr13:18491373-18491665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               231-429
               

               Cow position:
               chr13:3153514-3153724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               232-431
               

               Cow position:
               chr13:22345506-22345301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               64, 91
               

               Conread position:
               232-524
               

               Cow position:
               chr13:15239744-15239456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               24, 169
               

               Conread position:
               232-524
               

               Cow position:
               chr13:25978425-25978127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               94, 248
               

               Conread position:
               233-373
               

               Cow position:
               chr13:25313382-25313239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               233-374
               

               Cow position:
               chr13:41474647-41474783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               233-413
               

               Cow position:
               chr13:28081486-28081680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               233-511
               

               Cow position:
               chr13:15257596-15257318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               233-517
               

               Cow position:
               chr13:25926557-25926849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               23, 242
               

               Conread position:
               233-524
               

               Cow position:
               chr13:15289150-15288859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 88
               

               Conread position:
               233-524
               

               Cow position:
               chr13:17021956-17021665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 210
               

               Conread position:
               233-524
               

               Cow position:
               chr13:20314856-20314555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 254
               

               Conread position:
               233-524
               

               Cow position:
               chr13:54389248-54388955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               143, 48
               

               Conread position:
               234-332
               

               Cow position:
               chr13:17619364-17619462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               81
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               234-352
               

               Cow position:
               chr13:55327209-55327332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               234-358
               

               Cow position:
               chr13:40794569-40794447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               234-401
               

               Cow position:
               chr13:5659994-5659821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               142, 86
               

               Conread position:
               234-407
               

               Cow position:
               chr13:23823260-23823082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               234-414
               

               Cow position:
               chr13:17619649-17619851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               234-423
               

               Cow position:
               chr13:28605624-28605422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               234-424
               

               Cow position:
               chr13:10220728-10220930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               96, 113
               

               Conread position:
               234-427
               

               Cow position:
               chr13:21024754-21024956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               95, 165
               

               Conread position:
               234-429
               

               Cow position:
               chr13:23975398-23975193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               234-429
               

               Cow position:
               chr13:45499001-45499203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               234-440
               

               Cow position:
               chr13:33854911-33854698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               234-452
               

               Cow position:
               chr13:32017745-32017514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               88, 132
               

               Conread position:
               234-468
               

               Cow position:
               chr13:14927024-14927274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 182
               

               Conread position:
               234-468
               

               Cow position:
               chr13:49204784-49205012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               102, 20
               

               Conread position:
               234-471
               

               Cow position:
               chr13:6189829-6189584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               133, 242
               

               Conread position:
               234-473
               

               Cow position:
               chr13:15993155-15993405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 20
               

               Conread position:
               234-475
               

               Cow position:
               chr13:84362-84600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               103, 53
               

               Conread position:
               234-479
               

               Cow position:
               chr13:12989633-12989873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               142, 69
               

               Conread position:
               234-481
               

               Cow position:
               chr13:21242305-21242056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               133, 83
               

               Conread position:
               234-481
               

               Cow position:
               chr13:41157168-41157431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               86, 250
               

               Conread position:
               234-482
               

               Cow position:
               chr13:37775435-37775178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               234-503
               

               Cow position:
               chr13:38284201-38283932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               234-518
               

               Cow position:
               chr13:26100159-26100458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               92, 52
               

               Conread position:
               234-522
               

               Cow position:
               chr13:15194949-15194670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               234-524
               

               Cow position:
               chr13:5671816-5671527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               18, 226
               

               Conread position:
               234-524
               

               Cow position:
               chr13:6616992-6616688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               84, 207
               

               Conread position:
               234-524
               

               Cow position:
               chr13:9587811-9587525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               84, 37
               

               Conread position:
               234-524
               

               Cow position:
               chr13:10845389-10845659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               158, 86
               

               Conread position:
               234-524
               

               Cow position:
               chr13:17971271-17970964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               234-524
               

               Cow position:
               chr13:26480432-26480149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               234-524
               

               Cow position:
               chr13:45073477-45073187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               234-524
               

               Cow position:
               chr13:45352799-45353107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               235-343
               

               Cow position:
               chr13:21182921-21182813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-374
               

               Cow position:
               chr13:57322920-57323057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 86
               

               Conread position:
               235-405
               

               Cow position:
               chr13:6951353-6951529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               137, 19
               

               Conread position:
               235-430
               

               Cow position:
               chr13:37555099-37554899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               143, 85
               

               Conread position:
               235-473
               

               Cow position:
               chr13:34873357-34873608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               235-474
               

               Cow position:
               chr13:50457623-50457879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               235-475
               

               Cow position:
               chr13:15083431-15083680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 118
               

               Conread position:
               235-486
               

               Cow position:
               chr13:45439304-45439553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 98
               

               Conread position:
               235-495
               

               Cow position:
               chr13:33601458-33601195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               235-510
               

               Cow position:
               chr13:11103436-11103141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               87, 229
               

               Conread position:
               235-510
               

               Cow position:
               chr13:19883262-19882985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 100
               

               Conread position:
               235-518
               

               Cow position:
               chr13:620475-620195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               83, 12
               

               Conread position:
               235-524
               

               Cow position:
               chr13:5279437-5279123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               235-524
               

               Cow position:
               chr13:13196013-13196305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               139, 68
               

               Conread position:
               235-524
               

               Cow position:
               chr13:13501839-13501558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               137, 82
               

               Conread position:
               235-524
               

               Cow position:
               chr13:18058477-18058182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               235-524
               

               Cow position:
               chr13:19278867-19279160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 60
               

               Conread position:
               235-524
               

               Cow position:
               chr13:26698725-26698434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               141, 97
               

               Conread position:
               235-524
               

               Cow position:
               chr13:28291091-28291389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 247
               

               Conread position:
               235-524
               

               Cow position:
               chr13:44322663-44322964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               16, 246
               

               Conread position:
               235-524
               

               Cow position:
               chr13:49023093-49022804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               235-524
               

               Cow position:
               chr13:54582646-54582940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 160
               

               Conread position:
               236-365
               

               Cow position:
               chr13:47651643-47651514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 100
               

               Conread position:
               236-373
               

               Cow position:
               chr13:43342340-43342478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               100, 121
               

               Conread position:
               236-409
               

               Cow position:
               chr13:9612848-9613016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               236-429
               

               Cow position:
               chr13:30396490-30396681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               12, 137
               

               Conread position:
               236-434
               

               Cow position:
               chr13:34533156-34532954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               135, 80
               

               Conread position:
               236-455
               

               Cow position:
               chr13:30148783-30148562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               236-457
               

               Cow position:
               chr13:30315273-30315510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               236-468
               

               Cow position:
               chr13:11808354-11808588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               143, 48
               

               Conread position:
               236-481
               

               Cow position:
               chr13:21981197-21980948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 81
               

               Conread position:
               236-481
               

               Cow position:
               chr13:52893921-52894174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 56
               

               Conread position:
               236-490
               

               Cow position:
               chr13:32282898-32283158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               236-496
               

               Cow position:
               chr13:20880052-20879788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               106, 223
               

               Conread position:
               236-511
               

               Cow position:
               chr13:25504307-25504584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               16, 98
               

               Conread position:
               236-521
               

               Cow position:
               chr13:18197833-18197546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 18
               

               Conread position:
               236-524
               

               Cow position:
               chr13:17569323-17569036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 12
               

               Conread position:
               236-524
               

               Cow position:
               chr13:17745030-17745309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               15, 85
               

               Conread position:
               236-524
               

               Cow position:
               chr13:46043947-46044223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               156, 84
               

               Conread position:
               236-524
               

               Cow position:
               chr13:52477872-52477582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 90
               

               Conread position:
               237-374
               

               Cow position:
               chr13:23478674-23478813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               237-428
               

               Cow position:
               chr13:26422812-26423024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               237-429
               

               Cow position:
               chr13:16099357-16099147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               237-436
               

               Cow position:
               chr13:21277682-21277485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               237-437
               

               Cow position:
               chr13:20042490-20042282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               237-505
               

               Cow position:
               chr13:585100-584827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               79, 182
               

               Conread position:
               237-511
               

               Cow position:
               chr13:17611777-17611499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 95
               

               Conread position:
               237-524
               

               Cow position:
               chr13:12876202-12875907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               85, 225
               

               Conread position:
               237-524
               

               Cow position:
               chr13:22115449-22115770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               90, 52
               

               Conread position:
               237-524
               

               Cow position:
               chr13:23512154-23512430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               237-524
               

               Cow position:
               chr13:33256271-33256565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 167
               

               Conread position:
               237-524
               

               Cow position:
               chr13:43595331-43595045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               237-524
               

               Cow position:
               chr13:45023448-45023148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               237-524
               

               Cow position:
               chr13:54128824-54128529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               92, 65
               

               Conread position:
               237-524
               

               Cow position:
               chr13:57002497-57002791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               238-362
               

               Cow position:
               chr13:23480802-23480683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               238-374
               

               Cow position:
               chr13:58157282-58157146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               99, 115
               

               Conread position:
               238-461
               

               Cow position:
               chr13:33974521-33974740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               158, 114
               

               Conread position:
               238-466
               

               Cow position:
               chr13:37985972-37985732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 16
               

               Conread position:
               238-475
               

               Cow position:
               chr13:5263504-5263259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               138, 92
               

               Conread position:
               238-479
               

               Cow position:
               chr13:20174512-20174774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               238-481
               

               Cow position:
               chr13:3160174-3160420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               238-510
               

               Cow position:
               chr13:49503762-49503481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               74, 10
               

               Conread position:
               238-510
               

               Cow position:
               chr13:51528665-51528393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               9, 45
               

               Conread position:
               238-524
               

               Cow position:
               chr13:10989299-10989012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 232
               

               Conread position:
               238-524
               

               Cow position:
               chr13:20473900-20473618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 80
               

               Conread position:
               238-524
               

               Cow position:
               chr13:34281455-34281740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               239-374
               

               Cow position:
               chr13:8232793-8232652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               239-409
               

               Cow position:
               chr13:23399542-23399720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               239-411
               

               Cow position:
               chr13:1339371-1339185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               239-420
               

               Cow position:
               chr13:52891026-52891198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               154, 72
               

               Conread position:
               239-445
               

               Cow position:
               chr13:21235892-21235680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               136, 76
               

               Conread position:
               239-449
               

               Cow position:
               chr13:8699967-8699742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               239-461
               

               Cow position:
               chr13:20519847-20520068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               84, 125
               

               Conread position:
               239-463
               

               Cow position:
               chr13:49356273-49356040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               239-468
               

               Cow position:
               chr13:1462516-1462283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               239-468
               

               Cow position:
               chr13:15069748-15069971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               101, 81
               

               Conread position:
               239-481
               

               Cow position:
               chr13:11434800-11434548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               239-505
               

               Cow position:
               chr13:20534673-20534939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               239-509
               

               Cow position:
               chr13:21170305-21170578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 9
               

               Conread position:
               239-510
               

               Cow position:
               chr13:45074127-45073868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               77, 114
               

               Conread position:
               239-511
               

               Cow position:
               chr13:21171796-21171521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 61
               

               Conread position:
               239-518
               

               Cow position:
               chr13:20261559-20261266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 249
               

               Conread position:
               239-522
               

               Cow position:
               chr13:19610788-19610501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               137, 170
               

               Conread position:
               239-522
               

               Cow position:
               chr13:35659531-35659815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               239-524
               

               Cow position:
               chr13:55674434-55674145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 239
               

               Conread position:
               240-374
               

               Cow position:
               chr13:14782126-14782253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               240-374
               

               Cow position:
               chr13:17815018-17815149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               16, 66
               

               Conread position:
               240-408
               

               Cow position:
               chr13:27198692-27198861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               136, 14
               

               Conread position:
               240-436
               

               Cow position:
               chr13:22601909-22601713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               132, 78
               

               Conread position:
               240-441
               

               Cow position:
               chr13:13283116-13283334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               85, 8
               

               Conread position:
               240-468
               

               Cow position:
               chr13:52055816-52055578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               240-478
               

               Cow position:
               chr13:17089739-17089496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               13, 61
               

               Conread position:
               240-503
               

               Cow position:
               chr13:14063745-14063476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               240-508
               

               Cow position:
               chr13:21106920-21107191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               74, 108
               

               Conread position:
               240-524
               

               Cow position:
               chr13:13088810-13089091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 14
               

               Conread position:
               240-524
               

               Cow position:
               chr13:23961029-23960749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               91, 8
               

               Conread position:
               241-329
               

               Cow position:
               chr13:20684373-20684285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               241-424
               

               Cow position:
               chr13:11565618-11565806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               131, 7
               

               Conread position:
               241-429
               

               Cow position:
               chr13:369349-369149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               241-429
               

               Cow position:
               chr13:6113754-6113552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               241-452
               

               Cow position:
               chr13:47007935-47007721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               129, 76
               

               Conread position:
               241-453
               

               Cow position:
               chr13:45593701-45593916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               130, 79
               

               Conread position:
               241-468
               

               Cow position:
               chr13:55080916-55081156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 119
               

               Conread position:
               241-472
               

               Cow position:
               chr13:37621597-37621342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               62, 184
               

               Conread position:
               241-475
               

               Cow position:
               chr13:34261013-34261255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               133, 79
               

               Conread position:
               241-493
               

               Cow position:
               chr13:20579696-20579942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               135, 46
               

               Conread position:
               241-510
               

               Cow position:
               chr13:19007722-19007982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               137, 13
               

               Conread position:
               241-516
               

               Cow position:
               chr13:25969783-25970050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               100, 79
               

               Conread position:
               242-462
               

               Cow position:
               chr13:20821057-20820821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               132, 13
               

               Conread position:
               242-468
               

               Cow position:
               chr13:15996815-15997048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               99, 42
               

               Conread position:
               242-470
               

               Cow position:
               chr13:14575994-14576226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               129, 78
               

               Conread position:
               242-475
               

               Cow position:
               chr13:29831648-29831412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               131, 202
               

               Conread position:
               242-514
               

               Cow position:
               chr13:45108622-45108358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               150, 78
               

               Conread position:
               242-519
               

               Cow position:
               chr13:17823171-17822892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               110, 183
               

               Conread position:
               242-522
               

               Cow position:
               chr13:17159103-17158813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               83, 237
               

               Conread position:
               242-524
               

               Cow position:
               chr13:56686222-56686498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               132, 33
               

               Conread position:
               243-414
               

               Cow position:
               chr13:21426039-21425871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               149, 77
               

               Conread position:
               243-435
               

               Cow position:
               chr13:10711633-10711434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               129, 21
               

               Conread position:
               243-450
               

               Cow position:
               chr13:11231517-11231306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               55, 200
               

               Conread position:
               243-452
               

               Cow position:
               chr13:7046660-7046868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               80, 111
               

               Conread position:
               243-452
               

               Cow position:
               chr13:10522719-10522932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               135, 88
               

               Conread position:
               243-473
               

               Cow position:
               chr13:40541329-40541086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               243-473
               

               Cow position:
               chr13:57986154-57985919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               243-480
               

               Cow position:
               chr13:16714486-16714250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               87, 107
               

               Conread position:
               243-483
               

               Cow position:
               chr13:35526414-35526173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               80, 39
               

               Conread position:
               243-509
               

               Cow position:
               chr13:23667037-23667303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               129, 36
               

               Conread position:
               243-524
               

               Cow position:
               chr13:9800301-9800575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               243-524
               

               Cow position:
               chr13:18851868-18852144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               138, 73
               

               Conread position:
               243-524
               

               Cow position:
               chr13:25817309-25817592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 77
               

               Conread position:
               243-524
               

               Cow position:
               chr13:42672650-42672358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               84, 236
               

               Conread position:
               244-370
               

               Cow position:
               chr13:46330158-46330032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               99, 79
               

               Conread position:
               244-481
               

               Cow position:
               chr13:7149719-7149485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               244-524
               

               Cow position:
               chr13:17292347-17292069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               128, 89
               

               Conread position:
               244-524
               

               Cow position:
               chr13:39939785-39939503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               142, 37
               

               Conread position:
               245-461
               

               Cow position:
               chr13:14411673-14411902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               73, 195
               

               Conread position:
               245-465
               

               Cow position:
               chr13:37614416-37614180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               76, 228
               

               Conread position:
               245-482
               

               Cow position:
               chr13:56535249-56535483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               147, 107
               

               Conread position:
               245-510
               

               Cow position:
               chr13:60375706-60375438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               72, 80
               

               Conread position:
               245-519
               

               Cow position:
               chr13:11820942-11821214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               245-524
               

               Cow position:
               chr13:21136130-21135836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 238
               

               Conread position:
               245-524
               

               Cow position:
               chr13:21280719-21280423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 237
               

               Conread position:
               245-524
               

               Cow position:
               chr13:25695985-25695707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               114, 219
               

               Conread position:
               245-524
               

               Cow position:
               chr13:54701963-54702251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 43
               

               Conread position:
               246-339
               

               Cow position:
               chr13:20838311-20838218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               246-370
               

               Cow position:
               chr13:28347867-28347990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               246-401
               

               Cow position:
               chr13:23795596-23795442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               126, 72
               

               Conread position:
               246-443
               

               Cow position:
               chr13:24094534-24094328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 99
               

               Conread position:
               246-469
               

               Cow position:
               chr13:27180820-27181056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               246-471
               

               Cow position:
               chr13:55765393-55765160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               130, 74
               

               Conread position:
               246-473
               

               Cow position:
               chr13:15233730-15233945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               246-524
               

               Cow position:
               chr13:15041691-15041410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               246-524
               

               Cow position:
               chr13:22085949-22085680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 33
               

               Conread position:
               247-447
               

               Cow position:
               chr13:21188166-21188360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               129, 61
               

               Conread position:
               247-524
               

               Cow position:
               chr13:6860959-6861246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               75, 117
               

               Conread position:
               247-524
               

               Cow position:
               chr13:17114598-17114312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 235
               

               Conread position:
               247-524
               

               Cow position:
               chr13:53573762-53574034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               125, 35
               

               Conread position:
               248-373
               

               Cow position:
               chr13:48132727-48132848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               248-374
               

               Cow position:
               chr13:4135665-4135794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               248-374
               

               Cow position:
               chr13:25061968-25062087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               248-409
               

               Cow position:
               chr13:41979352-41979191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               63, 73
               

               Conread position:
               248-418
               

               Cow position:
               chr13:55775148-55775323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               248-424
               

               Cow position:
               chr13:25521139-25520946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               248-442
               

               Cow position:
               chr13:49283993-49283792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               123, 86
               

               Conread position:
               248-448
               

               Cow position:
               chr13:17813256-17813465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 55
               

               Conread position:
               248-455
               

               Cow position:
               chr13:8450118-8450331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               128, 87
               

               Conread position:
               248-457
               

               Cow position:
               chr13:15061705-15061478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               248-468
               

               Cow position:
               chr13:46525644-46525416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               93, 150
               

               Conread position:
               248-479
               

               Cow position:
               chr13:43525464-43525209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               248-481
               

               Cow position:
               chr13:46515844-46516087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               248-505
               

               Cow position:
               chr13:15195416-15195165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               126, 72
               

               Conread position:
               248-516
               

               Cow position:
               chr13:38035624-38035893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               124, 87
               

               Conread position:
               248-522
               

               Cow position:
               chr13:2803271-2803534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               140, 72
               

               Conread position:
               248-522
               

               Cow position:
               chr13:12670667-12670384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 46
               

               Conread position:
               248-522
               

               Cow position:
               chr13:17821474-17821206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 105
               

               Conread position:
               248-522
               

               Cow position:
               chr13:18999316-18999602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               73, 237
               

               Conread position:
               248-524
               

               Cow position:
               chr13:15991446-15991167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               100, 201
               

               Conread position:
               248-524
               

               Cow position:
               chr13:20288123-20288394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 161
               

               Conread position:
               248-524
               

               Cow position:
               chr13:24715034-24715307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               126, 72
               

               Conread position:
               248-524
               

               Cow position:
               chr13:41806561-41806839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 27
               

               Conread position:
               248-524
               

               Cow position:
               chr13:42200405-42200683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 75
               

               Conread position:
               249-429
               

               Cow position:
               chr13:16163374-16163556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               127, 35
               

               Conread position:
               249-439
               

               Cow position:
               chr13:8637480-8637683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               249-452
               

               Cow position:
               chr13:10210867-10210661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               127, 32
               

               Conread position:
               249-469
               

               Cow position:
               chr13:26262006-26261773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               249-470
               

               Cow position:
               chr13:14644839-14645068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               123, 71
               

               Conread position:
               249-481
               

               Cow position:
               chr13:21288299-21288058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 74
               

               Conread position:
               249-503
               

               Cow position:
               chr13:28440747-28440492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 32
               

               Conread position:
               249-524
               

               Cow position:
               chr13:6663970-6663683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 166
               

               Conread position:
               249-524
               

               Cow position:
               chr13:18696609-18696907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 137
               

               Conread position:
               250-362
               

               Cow position:
               chr13:15529458-15529350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               250-370
               

               Cow position:
               chr13:30809588-30809466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               250-374
               

               Cow position:
               chr13:37405502-37405622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               250-408
               

               Cow position:
               chr13:53619787-53619957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               250-409
               

               Cow position:
               chr13:5175386-5175551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               103, 68
               

               Conread position:
               250-418
               

               Cow position:
               chr13:13265351-13265524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               122, 80
               

               Conread position:
               250-434
               

               Cow position:
               chr13:52913663-52913853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               122, 78
               

               Conread position:
               250-450
               

               Cow position:
               chr13:6980712-6980916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               125, 70
               

               Conread position:
               250-473
               

               Cow position:
               chr13:58763822-58763599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               120, 70
               

               Conread position:
               250-474
               

               Cow position:
               chr13:61977171-61976939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               72, 129
               

               Conread position:
               250-478
               

               Cow position:
               chr13:50646842-50646611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               121, 70
               

               Conread position:
               250-510
               

               Cow position:
               chr13:37818958-37818700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               250-524
               

               Cow position:
               chr13:38329405-38329690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 80
               

               Conread position:
               251-456
               

               Cow position:
               chr13:42849342-42849131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 48
               

               Conread position:
               251-461
               

               Cow position:
               chr13:36876853-36877067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               121, 73
               

               Conread position:
               251-523
               

               Cow position:
               chr13:8374973-8374709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 90
               

               Conread position:
               251-524
               

               Cow position:
               chr13:34729053-34728778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               252-411
               

               Cow position:
               chr13:26395248-26395417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               252-474
               

               Cow position:
               chr13:19598876-19598646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               119, 214
               

               Conread position:
               252-524
               

               Cow position:
               chr13:20115033-20115317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               75, 208
               

               Conread position:
               252-524
               

               Cow position:
               chr13:20784383-20784658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 79
               

               Conread position:
               253-520
               

               Cow position:
               chr13:27525469-27525205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               123, 28
               

               Conread position:
               254-452
               

               Cow position:
               chr13:18093078-18092877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               118, 48
               

               Conread position:
               254-461
               

               Cow position:
               chr13:16908004-16908224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               254-503
               

               Cow position:
               chr13:55494728-55494477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 28
               

               Conread position:
               254-511
               

               Cow position:
               chr13:19393087-19393345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               118, 30
               

               Conread position:
               254-522
               

               Cow position:
               chr13:25435315-25435058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               254-523
               

               Cow position:
               chr13:48597700-48597972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               122, 192
               

               Conread position:
               254-524
               

               Cow position:
               chr13:6973953-6974224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               117, 221
               

               Conread position:
               254-524
               

               Cow position:
               chr13:13320588-13320858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 226
               

               Conread position:
               254-524
               

               Cow position:
               chr13:15756907-15757184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               90, 236
               

               Conread position:
               254-524
               

               Cow position:
               chr13:19022055-19022339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 230
               

               Conread position:
               254-524
               

               Cow position:
               chr13:24585839-24586107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 89
               

               Conread position:
               254-524
               

               Cow position:
               chr13:46329812-46329540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 27
               

               Conread position:
               255-421
               

               Cow position:
               chr13:16525436-16525257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               255-524
               

               Cow position:
               chr13:20154797-20155063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               256-423
               

               Cow position:
               chr13:1037429-1037607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               256-465
               

               Cow position:
               chr13:56958769-56958979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 129
               

               Conread position:
               256-471
               

               Cow position:
               chr13:47186023-47186251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               33, 172
               

               Conread position:
               256-496
               

               Cow position:
               chr13:12673495-12673258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               102, 91
               

               Conread position:
               256-524
               

               Cow position:
               chr13:972104-971829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 153
               

               Conread position:
               256-524
               

               Cow position:
               chr13:11260070-11260334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 78
               

               Conread position:
               258-439
               

               Cow position:
               chr13:52027341-52027152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               260-505
               

               Cow position:
               chr13:20217601-20217350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 212
               

               Conread position:
               262-468
               

               Cow position:
               chr13:20090568-20090365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               168, 83
               

               Conread position:
               263-524
               

               Cow position:
               chr13:19779055-19778785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 197
               

               Conread position:
               264-454
               

               Cow position:
               chr13:20795407-20795210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 180
               

               Conread position:
               264-524
               

               Cow position:
               chr13:24369386-24369646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 14
               

               Conread position:
               264-524
               

               Cow position:
               chr13:48165622-48165360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               273-523
               

               Cow position:
               chr13:34263563-34263306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               273-524
               

               Cow position:
               chr13:13211698-13211950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               99, 60
               

               Conread position:
               277-421
               

               Cow position:
               chr13:52249231-52249082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               280-429
               

               Cow position:
               chr13:6976026-6975871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               96, 49
               

               Conread position:
               281-434
               

               Cow position:
               chr13:9391382-9391540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 10
               

               Conread position:
               282-503
               

               Cow position:
               chr13:23478847-23479075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               52, 192
               

               Conread position:
               282-520
               

               Cow position:
               chr13:20666567-20666325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 127
               

               Conread position:
               282-524
               

               Cow position:
               chr13:20871212-20871453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               285-518
               

               Cow position:
               chr13:52057379-52057618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               91, 199
               

               Conread position:
               287-504
               

               Cow position:
               chr13:29662861-29663074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               288-452
               

               Cow position:
               chr13:38703054-38702878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               288-496
               

               Cow position:
               chr13:16160245-16160458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               55, 35
               

               Conread position:
               289-454
               

               Cow position:
               chr13:6087067-6086892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               289-524
               

               Cow position:
               chr13:40943065-40943308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 180
               

               Conread position:
               291-430
               

               Cow position:
               chr13:16790041-16790184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               304-481
               

               Cow position:
               chr13:11460475-11460660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               309-524
               

               Cow position:
               chr13:19320374-19320599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 168
               

               Conread position:
               310-524
               

               Cow position:
               chr13:3989051-3989267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               313-478
               

               Cow position:
               chr13:20706355-20706180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               315-524
               

               Cow position:
               chr13:18172186-18172402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 165
               

               Conread position:
               316-472
               

               Cow position:
               chr13:42640239-42640401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               54, 122
               

               Conread position:
               316-498
               

               Cow position:
               chr13:8350173-8350369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               316-517
               

               Cow position:
               chr13:23856064-23856269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               56, 151
               

               Conread position:
               316-522
               

               Cow position:
               chr13:17799928-17800135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               25, 161
               

               Conread position:
               316-524
               

               Cow position:
               chr13:13297532-13297739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               76, 149
               

               Conread position:
               316-524
               

               Cow position:
               chr13:17439915-17439706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               62, 93
               

               Conread position:
               316-524
               

               Cow position:
               chr13:20679192-20679403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 155
               

               Conread position:
               316-524
               

               Cow position:
               chr13:36771566-36771356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               317-501
               

               Cow position:
               chr13:23525964-23526153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 101
               

               Conread position:
               317-524
               

               Cow position:
               chr13:5082505-5082716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 90
               

               Conread position:
               317-524
               

               Cow position:
               chr13:9593370-9593572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               317-524
               

               Cow position:
               chr13:11381870-11381658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               12, 149
               

               Conread position:
               317-524
               

               Cow position:
               chr13:51116171-51115958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 159
               

               Conread position:
               318-522
               

               Cow position:
               chr13:55316342-55316127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               57, 174
               

               Conread position:
               319-522
               

               Cow position:
               chr13:56148377-56148585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 154
               

               Conread position:
               319-522
               

               Cow position:
               chr13:56160590-56160382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 154
               

               Conread position:
               319-524
               

               Cow position:
               chr13:56155295-56155089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 90
               

               Conread position:
               320-524
               

               Cow position:
               chr13:20562850-20563059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               56, 152
               

               Conread position:
               321-510
               

               Cow position:
               chr13:47022221-47022413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 149
               

               Conread position:
               323-468
               

               Cow position:
               chr13:50568546-50568392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               325-523
               

               Cow position:
               chr13:8355067-8355266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 81
               

               Conread position:
               326-507
               

               Cow position:
               chr13:48465967-48465782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 9
               

               Conread position:
               327-524
               

               Cow position:
               chr13:890297-890108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               328-510
               

               Cow position:
               chr13:10929123-10928942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               48, 99
               

               Conread position:
               328-524
               

               Cow position:
               chr13:43762034-43762233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               331-524
               

               Cow position:
               chr13:8401923-8402120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               331-524
               

               Cow position:
               chr13:48037491-48037685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 83
               

               Conread position:
               333-524
               

               Cow position:
               chr13:21176449-21176258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               43, 35
               

               Conread position:
               335-524
               

               Cow position:
               chr13:37484407-37484210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 188
               

               Conread position:
               337-524
               

               Cow position:
               chr13:17966335-17966145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 14
               

               Conread position:
               341-519
               

               Cow position:
               chr13:18181897-18181714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 146
               

               Conread position:
               345-524
               

               Cow position:
               chr13:15902906-15903086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 130
               

               Conread position:
               347-524
               

               Cow position:
               chr13:15885138-15884956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               25, 125
               

               Conread position:
               369-510
               

               Cow position:
               chr13:31813789-31813927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 89
               

               Conread position:
               372-510
               

               Cow position:
               chr13:34555912-34555776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               20, 88
               

               Conread position:
               372-524
               

               Cow position:
               chr13:8524702-8524552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 88
               

               Conread position:
               374-511
               

               Cow position:
               chr13:15144448-15144314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               374-524
               

               Cow position:
               chr13:15529118-15528968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 107
               

               Conread position:
               375-524
               

               Cow position:
               chr13:50751137-50750990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               17, 93
               

               Conread position:
               393-524
               

               Cow position:
               chr13:10099050-10098927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               37, 58
               
Show alignments to all cow chromosomes.
Conread position:	196-461
Cow position:	chr13:47243820-47243548 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	194
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	7, 75
Conread position:	208-445
Cow position:	chr13:53850563-53850815 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	191
Alignm E-value:	3.00004e-41
Alignm gaps (pig, cow):	38, 0
Conread position:	210-433
Cow position:	chr13:21246965-21246731 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	164
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	124, 36
Conread position:	210-524
Cow position:	chr13:12045598-12045271 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	224
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	113, 37
Conread position:	212-428
Cow position:	chr13:13797065-13796838 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	159
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	110, 22
Conread position:	214-366
Cow position:	chr13:38683275-38683116 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	122
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	34, 7
Conread position:	215-374
Cow position:	chr13:48165989-48165835 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	124
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	11, 69
Conread position:	215-446
Cow position:	chr13:9124675-9124917 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	180
Alignm E-value:	4e-34
Alignm gaps (pig, cow):	9, 110
Conread position:	216-470
Cow position:	chr13:8779006-8779258 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	175
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	23, 141
Conread position:	217-332
Cow position:	chr13:8354932-8355047 (view UCSC Genome Browser custom track)
Alignm length:	116
Alignm identity:	91
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	217-423
Cow position:	chr13:8537574-8537790 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	150
Alignm E-value:	9e-21
Alignm gaps (pig, cow):	106, 16
Conread position:	218-369
Cow position:	chr13:53847364-53847215 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	111
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	102, 0
Conread position:	218-434
Cow position:	chr13:11146807-11147035 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	166
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	25, 9
Conread position:	220-460
Cow position:	chr13:25604849-25604615 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	166
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	31, 42
Conread position:	220-524
Cow position:	chr13:10925168-10924849 (view UCSC Genome Browser custom track)
Alignm length:	320
Alignm identity:	223
Alignm E-value:	7e-40
Alignm gaps (pig, cow):	21, 0
Conread position:	221-370
Cow position:	chr13:62304325-62304478 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	116
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	31, 0
Conread position:	221-374
Cow position:	chr13:26097936-26098092 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	119
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	25, 104
Conread position:	221-430
Cow position:	chr13:15162878-15162660 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	155
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	98, 201
Conread position:	221-511
Cow position:	chr13:151728-152011 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	222
Alignm E-value:	2.99878e-43
Alignm gaps (pig, cow):	151, 61
Conread position:	222-430
Cow position:	chr13:3149675-3149458 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	153
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	26, 202