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Cow genome map

           
Conread name:
           
rplun0113_m6.y1
        

               
Conread position:
               
194-430
               

               
Cow position:
               
chr16:11019257-11019505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 61
               

               
Conread position:
               
210-422
               

               
Cow position:
               
chr16:18429828-18429606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
213-363
               

               
Cow position:
               
chr16:10033101-10032948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
214-466
               

               
Cow position:
               
chr16:50282195-50282459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
216-352
               

               
Cow position:
               
chr16:4911219-4911349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
217-524
               

               
Cow position:
               
chr16:30305580-30305893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
218-519
               

               
Cow position:
               
chr16:29528070-29527750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
218-524
               

               
Cow position:
               
chr16:44743897-44744212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
36, 262
               

               
Conread position:
               
220-487
               

               
Cow position:
               
chr16:280460-280728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
220-519
               

               
Cow position:
               
chr16:44210330-44210638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
220-522
               

               
Cow position:
               
chr16:37117306-37116997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 257
               

               
Conread position:
               
222-409
               

               
Cow position:
               
chr16:31011558-31011359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
222-426
               

               
Cow position:
               
chr16:45826493-45826703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
150, 97
               

               
Conread position:
               
222-446
               

               
Cow position:
               
chr16:14210554-14210778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
209, 163
               

               
Conread position:
               
222-510
               

               
Cow position:
               
chr16:11134755-11135047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
222-524
               

               
Cow position:
               
chr16:9973251-9973577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 261
               

               
Conread position:
               
222-524
               

               
Cow position:
               
chr16:42398661-42398976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 219
               

               
Conread position:
               
223-350
               

               
Cow position:
               
chr16:52705819-52705945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
223-373
               

               
Cow position:
               
chr16:12101475-12101325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
223-436
               

               
Cow position:
               
chr16:8288722-8288942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
224-434
               

               
Cow position:
               
chr16:56912457-56912679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
224-469
               

               
Cow position:
               
chr16:591579-591840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
224-510
               

               
Cow position:
               
chr16:7076147-7075849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 195
               

               
Conread position:
               
224-524
               

               
Cow position:
               
chr16:2223168-2223480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 251
               

               
Conread position:
               
225-437
               

               
Cow position:
               
chr16:19478542-19478762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
225-523
               

               
Cow position:
               
chr16:55683523-55683222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
225-524
               

               
Cow position:
               
chr16:49125965-49126267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
226-410
               

               
Cow position:
               
chr16:13906229-13906415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
226-423
               

               
Cow position:
               
chr16:38581229-38581020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chr16:8469902-8469689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
226-461
               

               
Cow position:
               
chr16:53451932-53451684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
226-518
               

               
Cow position:
               
chr16:22984975-22984685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
227-374
               

               
Cow position:
               
chr16:22863469-22863609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
227-428
               

               
Cow position:
               
chr16:3032492-3032704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
227-453
               

               
Cow position:
               
chr16:18572832-18573067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
227-459
               

               
Cow position:
               
chr16:9596585-9596351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 32
               

               
Conread position:
               
227-505
               

               
Cow position:
               
chr16:43308343-43308621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
227-522
               

               
Cow position:
               
chr16:238489-238189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
107, 86
               

               
Conread position:
               
227-523
               

               
Cow position:
               
chr16:38243438-38243739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
228-342
               

               
Cow position:
               
chr16:40225118-40225229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
228-374
               

               
Cow position:
               
chr16:24055107-24054967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
228-524
               

               
Cow position:
               
chr16:44394509-44394183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 276
               

               
Conread position:
               
229-524
               

               
Cow position:
               
chr16:10592665-10592356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
230-374
               

               
Cow position:
               
chr16:12091433-12091577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
230-472
               

               
Cow position:
               
chr16:48613256-48613507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 212
               

               
Conread position:
               
230-475
               

               
Cow position:
               
chr16:14841585-14841325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 247
               

               
Conread position:
               
230-524
               

               
Cow position:
               
chr16:45731185-45731467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
231-524
               

               
Cow position:
               
chr16:19052852-19052561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 64
               

               
Conread position:
               
232-470
               

               
Cow position:
               
chr16:18047933-18048185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
232-493
               

               
Cow position:
               
chr16:20921372-20921107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
232-524
               

               
Cow position:
               
chr16:15824223-15824523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
55, 224
               

               
Conread position:
               
233-411
               

               
Cow position:
               
chr16:33073668-33073851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 78
               

               
Conread position:
               
233-421
               

               
Cow position:
               
chr16:29311745-29311543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
233-424
               

               
Cow position:
               
chr16:9097243-9097040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
233-524
               

               
Cow position:
               
chr16:31559121-31558815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 170
               

               
Conread position:
               
233-524
               

               
Cow position:
               
chr16:35188481-35188176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 251
               

               
Conread position:
               
234-350
               

               
Cow position:
               
chr16:11634887-11634767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
234-361
               

               
Cow position:
               
chr16:41115778-41115904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
234-369
               

               
Cow position:
               
chr16:17617144-17617283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
234-369
               

               
Cow position:
               
chr16:41095946-41095809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
234-407
               

               
Cow position:
               
chr16:5396600-5396783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
234-411
               

               
Cow position:
               
chr16:30646725-30646542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
125, 86
               

               
Conread position:
               
234-411
               

               
Cow position:
               
chr16:56285478-56285657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
234-413
               

               
Cow position:
               
chr16:7727822-7728007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
234-419
               

               
Cow position:
               
chr16:48455889-48455701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
234-420
               

               
Cow position:
               
chr16:4616469-4616662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
138, 23
               

               
Conread position:
               
234-424
               

               
Cow position:
               
chr16:8809881-8810077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
137, 86
               

               
Conread position:
               
234-429
               

               
Cow position:
               
chr16:22776202-22776410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
234-443
               

               
Cow position:
               
chr16:7928165-7928388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
234-448
               

               
Cow position:
               
chr16:258067-258290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
234-452
               

               
Cow position:
               
chr16:35297622-35297394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
234-465
               

               
Cow position:
               
chr16:16232275-16232028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
234-468
               

               
Cow position:
               
chr16:9560269-9560523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
234-468
               

               
Cow position:
               
chr16:31149594-31149351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 114
               

               
Conread position:
               
234-468
               

               
Cow position:
               
chr16:49860453-49860204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
234-469
               

               
Cow position:
               
chr16:14754112-14754356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 99
               

               
Conread position:
               
234-473
               

               
Cow position:
               
chr16:47852379-47852626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
234-474
               

               
Cow position:
               
chr16:33595735-33595973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
158, 22
               

               
Conread position:
               
234-475
               

               
Cow position:
               
chr16:13306655-13306907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
98, 221
               

               
Conread position:
               
234-477
               

               
Cow position:
               
chr16:50442767-50442510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
234-488
               

               
Cow position:
               
chr16:45122259-45121991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
22, 253
               

               
Conread position:
               
234-508
               

               
Cow position:
               
chr16:45294761-45294480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 39
               

               
Conread position:
               
234-508
               

               
Cow position:
               
chr16:56232027-56231764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
158, 14
               

               
Conread position:
               
234-510
               

               
Cow position:
               
chr16:30036453-30036170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
234-510
               

               
Cow position:
               
chr16:33198217-33198503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
234-511
               

               
Cow position:
               
chr16:46548046-46548342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
234-519
               

               
Cow position:
               
chr16:8242709-8242993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 108
               

               
Conread position:
               
234-520
               

               
Cow position:
               
chr16:8068600-8068895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 183
               

               
Conread position:
               
234-520
               

               
Cow position:
               
chr16:8530683-8530959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
234-520
               

               
Cow position:
               
chr16:29712631-29712346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
234-522
               

               
Cow position:
               
chr16:44429093-44428803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
124, 48
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr16:7418589-7418307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
137, 50
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr16:7583614-7583319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
101, 248
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr16:18206179-18205882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr16:31078887-31079169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
138, 47
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr16:33135145-33134863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr16:40514277-40514559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 83
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr16:42733805-42734094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr16:46655500-46655207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr16:50289373-50289071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 258
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr16:53813432-53813732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 153
               

               
Conread position:
               
235-364
               

               
Cow position:
               
chr16:39646825-39646698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
235-374
               

               
Cow position:
               
chr16:23880998-23881137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
235-429
               

               
Cow position:
               
chr16:45193593-45193797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
235-432
               

               
Cow position:
               
chr16:33290602-33290393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
235-443
               

               
Cow position:
               
chr16:8953459-8953680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 187
               

               
Conread position:
               
235-451
               

               
Cow position:
               
chr16:31484453-31484673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
235-454
               

               
Cow position:
               
chr16:48567744-48567519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
235-469
               

               
Cow position:
               
chr16:11584192-11584433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 78
               

               
Conread position:
               
235-486
               

               
Cow position:
               
chr16:13995982-13996241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
235-499
               

               
Cow position:
               
chr16:7136132-7136402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
235-504
               

               
Cow position:
               
chr16:31880538-31880821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
235-510
               

               
Cow position:
               
chr16:22207272-22207007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
195, 47
               

               
Conread position:
               
235-511
               

               
Cow position:
               
chr16:54709837-54710099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
235-516
               

               
Cow position:
               
chr16:19644103-19643814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
235-520
               

               
Cow position:
               
chr16:52834686-52834964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
157, 117
               

               
Conread position:
               
235-523
               

               
Cow position:
               
chr16:820466-820171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
124, 85
               

               
Conread position:
               
235-523
               

               
Cow position:
               
chr16:47835134-47834852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
157, 178
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr16:10039629-10039923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
92, 165
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr16:11008543-11008265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr16:33705017-33704728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 81
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr16:38663494-38663786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr16:45139878-45139593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr16:47820788-47820488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
236-361
               

               
Cow position:
               
chr16:38852587-38852713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
236-380
               

               
Cow position:
               
chr16:31493263-31493117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
236-413
               

               
Cow position:
               
chr16:15251846-15252024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
236-423
               

               
Cow position:
               
chr16:21442394-21442593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
236-430
               

               
Cow position:
               
chr16:7912341-7912140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
236-437
               

               
Cow position:
               
chr16:19402551-19402759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 84
               

               
Conread position:
               
236-449
               

               
Cow position:
               
chr16:24142737-24142967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
236-453
               

               
Cow position:
               
chr16:56615288-56615519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
236-455
               

               
Cow position:
               
chr16:56627146-56626922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
236-461
               

               
Cow position:
               
chr16:9830662-9830424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
236-468
               

               
Cow position:
               
chr16:9729991-9730234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
236-474
               

               
Cow position:
               
chr16:29636031-29636264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
156, 84
               

               
Conread position:
               
236-478
               

               
Cow position:
               
chr16:19815057-19815283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
156, 59
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr16:27728464-27728190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr16:26649420-26649693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
236-510
               

               
Cow position:
               
chr16:18353740-18354021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
236-520
               

               
Cow position:
               
chr16:40446483-40446179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 184
               

               
Conread position:
               
236-523
               

               
Cow position:
               
chr16:51709935-51710206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
236-524
               

               
Cow position:
               
chr16:17746058-17745755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
236-524
               

               
Cow position:
               
chr16:23681575-23681289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 168
               

               
Conread position:
               
236-524
               

               
Cow position:
               
chr16:45554647-45554364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
236-524
               

               
Cow position:
               
chr16:46433110-46433408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 240
               

               
Conread position:
               
237-418
               

               
Cow position:
               
chr16:52325383-52325576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
237-424
               

               
Cow position:
               
chr16:33302398-33302201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
237-434
               

               
Cow position:
               
chr16:10249604-10249811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
237-436
               

               
Cow position:
               
chr16:41806910-41807098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
237-439
               

               
Cow position:
               
chr16:26501661-26501460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 119
               

               
Conread position:
               
237-442
               

               
Cow position:
               
chr16:30211662-30211452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
133, 83
               

               
Conread position:
               
237-444
               

               
Cow position:
               
chr16:30908736-30908951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 94
               

               
Conread position:
               
237-452
               

               
Cow position:
               
chr16:5382399-5382166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
237-457
               

               
Cow position:
               
chr16:11660257-11660475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
136, 84
               

               
Conread position:
               
237-473
               

               
Cow position:
               
chr16:18243950-18243709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 195
               

               
Conread position:
               
237-473
               

               
Cow position:
               
chr16:42078636-42078880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
237-474
               

               
Cow position:
               
chr16:38708623-38708871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
237-505
               

               
Cow position:
               
chr16:7665853-7665577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 240
               

               
Conread position:
               
237-521
               

               
Cow position:
               
chr16:13990179-13989906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
135, 83
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr16:20205672-20205379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr16:36120783-36121058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
154, 115
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr16:41590983-41590694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr16:48493374-48493100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr16:56670697-56670999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 231
               

               
Conread position:
               
238-374
               

               
Cow position:
               
chr16:12111755-12111891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
238-374
               

               
Cow position:
               
chr16:12331307-12331167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
238-374
               

               
Cow position:
               
chr16:47274511-47274652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
238-452
               

               
Cow position:
               
chr16:14376993-14376770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 174
               

               
Conread position:
               
238-468
               

               
Cow position:
               
chr16:38905011-38905262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
238-469
               

               
Cow position:
               
chr16:35758414-35758173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
238-473
               

               
Cow position:
               
chr16:21369977-21370220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
238-475
               

               
Cow position:
               
chr16:20824689-20824442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
238-476
               

               
Cow position:
               
chr16:56595176-56595423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
238-480
               

               
Cow position:
               
chr16:56243672-56243925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
238-510
               

               
Cow position:
               
chr16:13689875-13689600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 82
               

               
Conread position:
               
238-510
               

               
Cow position:
               
chr16:16368521-16368804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
238-510
               

               
Cow position:
               
chr16:23034041-23033783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
238-524
               

               
Cow position:
               
chr16:8065673-8065963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
84, 238
               

               
Conread position:
               
238-524
               

               
Cow position:
               
chr16:25170604-25170315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
238-524
               

               
Cow position:
               
chr16:50417498-50417766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 107
               

               
Conread position:
               
239-407
               

               
Cow position:
               
chr16:3938801-3938977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
239-429
               

               
Cow position:
               
chr16:45278749-45278548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
239-435
               

               
Cow position:
               
chr16:4102630-4102825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
239-437
               

               
Cow position:
               
chr16:9513504-9513297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
239-465
               

               
Cow position:
               
chr16:55965396-55965158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
239-474
               

               
Cow position:
               
chr16:17143151-17142899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
239-480
               

               
Cow position:
               
chr16:37401451-37401211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
239-505
               

               
Cow position:
               
chr16:15370894-15370623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 81
               

               
Conread position:
               
239-505
               

               
Cow position:
               
chr16:16817045-16816764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
239-509
               

               
Cow position:
               
chr16:9985191-9985463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
131, 57
               

               
Conread position:
               
239-511
               

               
Cow position:
               
chr16:12320434-12320154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 234
               

               
Conread position:
               
239-524
               

               
Cow position:
               
chr16:8461871-8462157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
239-524
               

               
Cow position:
               
chr16:9905307-9905012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 236
               

               
Conread position:
               
239-524
               

               
Cow position:
               
chr16:13698729-13698434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
81, 240
               

               
Conread position:
               
239-524
               

               
Cow position:
               
chr16:16597770-16597482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 233
               

               
Conread position:
               
239-524
               

               
Cow position:
               
chr16:23564349-23564059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 200
               

               
Conread position:
               
239-524
               

               
Cow position:
               
chr16:54226403-54226677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
239-524
               

               
Cow position:
               
chr16:56082151-56082441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 244
               

               
Conread position:
               
240-339
               

               
Cow position:
               
chr16:24672650-24672749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
240-357
               

               
Cow position:
               
chr16:21761738-21761857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
240-364
               

               
Cow position:
               
chr16:30613013-30613134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 75
               

               
Conread position:
               
240-429
               

               
Cow position:
               
chr16:40029675-40029872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
240-456
               

               
Cow position:
               
chr16:35074775-35074546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
240-469
               

               
Cow position:
               
chr16:53408737-53408959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
152, 103
               

               
Conread position:
               
240-503
               

               
Cow position:
               
chr16:55233888-55233626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
136, 80
               

               
Conread position:
               
240-510
               

               
Cow position:
               
chr16:45678189-45677913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
240-524
               

               
Cow position:
               
chr16:53508782-53509061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
241-361
               

               
Cow position:
               
chr16:33076905-33077026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
241-374
               

               
Cow position:
               
chr16:30816131-30816002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
241-376
               

               
Cow position:
               
chr16:22123446-22123578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
241-423
               

               
Cow position:
               
chr16:19496810-19497005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
241-473
               

               
Cow position:
               
chr16:32142301-32142058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 118
               

               
Conread position:
               
241-510
               

               
Cow position:
               
chr16:48398048-48398321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
129, 92
               

               
Conread position:
               
241-518
               

               
Cow position:
               
chr16:29655523-29655243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
241-522
               

               
Cow position:
               
chr16:40333126-40333403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
241-524
               

               
Cow position:
               
chr16:24855742-24855463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 6
               

               
Conread position:
               
241-524
               

               
Cow position:
               
chr16:31117410-31117693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
242-410
               

               
Cow position:
               
chr16:19282215-19282036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
242-420
               

               
Cow position:
               
chr16:9615007-9615196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 171
               

               
Conread position:
               
242-462
               

               
Cow position:
               
chr16:19670151-19670375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
128, 5
               

               
Conread position:
               
242-464
               

               
Cow position:
               
chr16:2751182-2750957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
242-510
               

               
Cow position:
               
chr16:8738274-8738000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 6
               

               
Conread position:
               
242-511
               

               
Cow position:
               
chr16:42432909-42433181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
117, 80
               

               
Conread position:
               
242-512
               

               
Cow position:
               
chr16:33405279-33405562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 242
               

               
Conread position:
               
242-520
               

               
Cow position:
               
chr16:42539370-42539664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 184
               

               
Conread position:
               
242-522
               

               
Cow position:
               
chr16:9553257-9552984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
136, 40
               

               
Conread position:
               
242-524
               

               
Cow position:
               
chr16:935249-935525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
124, 171
               

               
Conread position:
               
242-524
               

               
Cow position:
               
chr16:4856892-4857180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 6
               

               
Conread position:
               
242-524
               

               
Cow position:
               
chr16:10148475-10148202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
150, 78
               

               
Conread position:
               
243-411
               

               
Cow position:
               
chr16:27326915-27327096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
243-468
               

               
Cow position:
               
chr16:1582722-1582954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
243-486
               

               
Cow position:
               
chr16:44138284-44138538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
243-495
               

               
Cow position:
               
chr16:28395883-28396133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
243-522
               

               
Cow position:
               
chr16:11957372-11957660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
243-524
               

               
Cow position:
               
chr16:30186851-30186565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 59
               

               
Conread position:
               
243-524
               

               
Cow position:
               
chr16:52274927-52275209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
244-461
               

               
Cow position:
               
chr16:15945046-15945277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
244-524
               

               
Cow position:
               
chr16:32969876-32970157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 110
               

               
Conread position:
               
244-524
               

               
Cow position:
               
chr16:45700274-45700561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
78, 118
               

               
Conread position:
               
244-524
               

               
Cow position:
               
chr16:51501136-51500855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 156
               

               
Conread position:
               
245-414
               

               
Cow position:
               
chr16:13791813-13791630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
245-468
               

               
Cow position:
               
chr16:6609304-6609532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 57
               

               
Conread position:
               
245-468
               

               
Cow position:
               
chr16:39473953-39474180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
245-503
               

               
Cow position:
               
chr16:41752376-41752635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 161
               

               
Conread position:
               
245-524
               

               
Cow position:
               
chr16:3304241-3303947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
245-524
               

               
Cow position:
               
chr16:8193661-8193377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
245-524
               

               
Cow position:
               
chr16:22773179-22772899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
246-404
               

               
Cow position:
               
chr16:23515562-23515729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
246-410
               

               
Cow position:
               
chr16:33629623-33629454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
246-429
               

               
Cow position:
               
chr16:24674469-24674666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
246-468
               

               
Cow position:
               
chr16:11359351-11359123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
126, 74
               

               
Conread position:
               
246-481
               

               
Cow position:
               
chr16:15407352-15407597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
246-523
               

               
Cow position:
               
chr16:51598409-51598683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
56, 219
               

               
Conread position:
               
246-524
               

               
Cow position:
               
chr16:7151969-7152250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
246-524
               

               
Cow position:
               
chr16:14323994-14324272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
246-524
               

               
Cow position:
               
chr16:17134857-17135138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 235
               

               
Conread position:
               
246-524
               

               
Cow position:
               
chr16:56874028-56874303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 112
               

               
Conread position:
               
247-459
               

               
Cow position:
               
chr16:27281704-27281901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
183, 35
               

               
Conread position:
               
247-465
               

               
Cow position:
               
chr16:11390071-11390311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
247-468
               

               
Cow position:
               
chr16:23822826-23823056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
247-480
               

               
Cow position:
               
chr16:45813495-45813734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 163
               

               
Conread position:
               
248-350
               

               
Cow position:
               
chr16:11791286-11791185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
248-364
               

               
Cow position:
               
chr16:11105816-11105699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 101
               

               
Conread position:
               
248-364
               

               
Cow position:
               
chr16:51216843-51216961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
248-370
               

               
Cow position:
               
chr16:35476939-35477057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
248-407
               

               
Cow position:
               
chr16:49733943-49734112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
248-420
               

               
Cow position:
               
chr16:50569462-50569284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 82
               

               
Conread position:
               
248-451
               

               
Cow position:
               
chr16:11083198-11082987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
248-469
               

               
Cow position:
               
chr16:28444285-28444519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
248-471
               

               
Cow position:
               
chr16:7723901-7723670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
124, 50
               

               
Conread position:
               
248-481
               

               
Cow position:
               
chr16:39165435-39165200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
122, 68
               

               
Conread position:
               
248-511
               

               
Cow position:
               
chr16:48957001-48956733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 232
               

               
Conread position:
               
248-520
               

               
Cow position:
               
chr16:14242570-14242296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
83, 177
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr16:12274272-12273990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr16:25839813-25839540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr16:27659558-27659829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr16:28192254-28191990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr16:49336422-49336150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
128, 72
               

               
Conread position:
               
249-448
               

               
Cow position:
               
chr16:12220887-12220673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
249-460
               

               
Cow position:
               
chr16:50286714-50286492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
249-468
               

               
Cow position:
               
chr16:46552993-46552765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
249-477
               

               
Cow position:
               
chr16:51697276-51697045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
118, 68
               

               
Conread position:
               
249-524
               

               
Cow position:
               
chr16:7542487-7542208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
74, 99
               

               
Conread position:
               
250-365
               

               
Cow position:
               
chr16:12236108-12236221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
250-408
               

               
Cow position:
               
chr16:48130196-48130362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
250-410
               

               
Cow position:
               
chr16:41696206-41696039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
250-427
               

               
Cow position:
               
chr16:16178225-16178046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 78
               

               
Conread position:
               
250-430
               

               
Cow position:
               
chr16:33430960-33430782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
142, 70
               

               
Conread position:
               
250-451
               

               
Cow position:
               
chr16:12324654-12324444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
250-476
               

               
Cow position:
               
chr16:51578249-51578471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
122, 63
               

               
Conread position:
               
250-524
               

               
Cow position:
               
chr16:52170253-52169978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 68
               

               
Conread position:
               
251-422
               

               
Cow position:
               
chr16:13290698-13290533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
141, 79
               

               
Conread position:
               
251-479
               

               
Cow position:
               
chr16:7626352-7626121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
124, 30
               

               
Conread position:
               
251-499
               

               
Cow position:
               
chr16:12085610-12085848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
138, 60
               

               
Conread position:
               
251-524
               

               
Cow position:
               
chr16:7505276-7505009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 14
               

               
Conread position:
               
251-524
               

               
Cow position:
               
chr16:27723410-27723134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
141, 101
               

               
Conread position:
               
251-524
               

               
Cow position:
               
chr16:34753754-34754039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
67, 243
               

               
Conread position:
               
252-494
               

               
Cow position:
               
chr16:47519030-47518795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
112, 58
               

               
Conread position:
               
252-510
               

               
Cow position:
               
chr16:54579363-54579101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 168
               

               
Conread position:
               
252-517
               

               
Cow position:
               
chr16:3047144-3047413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
252-517
               

               
Cow position:
               
chr16:4275544-4275813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
252-524
               

               
Cow position:
               
chr16:7441902-7442178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
79, 170
               

               
Conread position:
               
252-524
               

               
Cow position:
               
chr16:48145207-48145481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
254-422
               

               
Cow position:
               
chr16:51143995-51143818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
254-457
               

               
Cow position:
               
chr16:7546640-7546843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
254-468
               

               
Cow position:
               
chr16:9959025-9958800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
254-469
               

               
Cow position:
               
chr16:14106840-14106613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
254-475
               

               
Cow position:
               
chr16:17460373-17460132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
254-481
               

               
Cow position:
               
chr16:42444356-42444116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 227
               

               
Conread position:
               
254-499
               

               
Cow position:
               
chr16:8673414-8673675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
254-504
               

               
Cow position:
               
chr16:8239668-8239926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
254-510
               

               
Cow position:
               
chr16:42977670-42977398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
254-520
               

               
Cow position:
               
chr16:42778141-42777889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
176, 81
               

               
Conread position:
               
254-524
               

               
Cow position:
               
chr16:48095573-48095842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
254-524
               

               
Cow position:
               
chr16:50872993-50873243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
256-468
               

               
Cow position:
               
chr16:32893813-32893600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
256-524
               

               
Cow position:
               
chr16:4910327-4910605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 221
               

               
Conread position:
               
256-524
               

               
Cow position:
               
chr16:29038111-29037833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
257-428
               

               
Cow position:
               
chr16:15949315-15949495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 92
               

               
Conread position:
               
258-441
               

               
Cow position:
               
chr16:16025636-16025435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
258-475
               

               
Cow position:
               
chr16:15905052-15905284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
258-510
               

               
Cow position:
               
chr16:31561946-31561687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 212
               

               
Conread position:
               
258-524
               

               
Cow position:
               
chr16:424617-424892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
65, 219
               

               
Conread position:
               
259-462
               

               
Cow position:
               
chr16:7812884-7812668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
259-465
               

               
Cow position:
               
chr16:12939808-12939593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
119, 58
               

               
Conread position:
               
261-374
               

               
Cow position:
               
chr16:41653161-41653048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
261-448
               

               
Cow position:
               
chr16:33632489-33632683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
261-475
               

               
Cow position:
               
chr16:12010287-12010059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
264-446
               

               
Cow position:
               
chr16:34204879-34205070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
264-447
               

               
Cow position:
               
chr16:17736414-17736230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
264-472
               

               
Cow position:
               
chr16:51795418-51795635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 121
               

               
Conread position:
               
264-521
               

               
Cow position:
               
chr16:10505000-10504756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
264-524
               

               
Cow position:
               
chr16:14125307-14125065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
264-524
               

               
Cow position:
               
chr16:33646201-33645936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 225
               

               
Conread position:
               
265-469
               

               
Cow position:
               
chr16:27701077-27701289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
265-524
               

               
Cow position:
               
chr16:26676504-26676765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
266-524
               

               
Cow position:
               
chr16:16571084-16570836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
266-524
               

               
Cow position:
               
chr16:23729734-23730005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 219
               

               
Conread position:
               
273-436
               

               
Cow position:
               
chr16:39385666-39385495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
273-524
               

               
Cow position:
               
chr16:13578678-13578940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
273-524
               

               
Cow position:
               
chr16:42241946-42242194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr16:1220005-1220260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
278-524
               

               
Cow position:
               
chr16:47964649-47964894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
279-524
               

               
Cow position:
               
chr16:41578397-41578147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
280-468
               

               
Cow position:
               
chr16:25484492-25484311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 53
               

               
Conread position:
               
280-524
               

               
Cow position:
               
chr16:51112711-51112955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 100
               

               
Conread position:
               
282-524
               

               
Cow position:
               
chr16:31348589-31348846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 123
               

               
Conread position:
               
283-479
               

               
Cow position:
               
chr16:11615076-11615284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
284-480
               

               
Cow position:
               
chr16:48006328-48006533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
284-524
               

               
Cow position:
               
chr16:33226372-33226617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
39, 193
               

               
Conread position:
               
287-522
               

               
Cow position:
               
chr16:21905310-21905087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
288-503
               

               
Cow position:
               
chr16:8366683-8366890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
292-510
               

               
Cow position:
               
chr16:54679821-54679604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
294-524
               

               
Cow position:
               
chr16:25387130-25386896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 116
               

               
Conread position:
               
295-496
               

               
Cow position:
               
chr16:48086718-48086920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
312-510
               

               
Cow position:
               
chr16:5636721-5636521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
313-524
               

               
Cow position:
               
chr16:34220320-34220105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
315-524
               

               
Cow position:
               
chr16:11105685-11105474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 5
               

               
Conread position:
               
315-524
               

               
Cow position:
               
chr16:40562363-40562152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
316-503
               

               
Cow position:
               
chr16:39172015-39172216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
316-505
               

               
Cow position:
               
chr16:45785870-45785675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 155
               

               
Conread position:
               
316-509
               

               
Cow position:
               
chr16:496243-496439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 149
               

               
Conread position:
               
316-510
               

               
Cow position:
               
chr16:17945656-17945455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 172
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr16:3114672-3114459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 152
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr16:5364034-5363817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
56, 171
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr16:17903512-17903728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 176
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr16:33054348-33054562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
56, 152
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr16:48340562-48340775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr16:53792686-53792897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
56, 153
               

               
Conread position:
               
317-505
               

               
Cow position:
               
chr16:49169249-49169444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 155
               

               
Conread position:
               
317-508
               

               
Cow position:
               
chr16:7980920-7980729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
317-510
               

               
Cow position:
               
chr16:46430021-46430217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
317-524
               

               
Cow position:
               
chr16:7550098-7549888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
318-480
               

               
Cow position:
               
chr16:17291890-17292062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
318-503
               

               
Cow position:
               
chr16:11806803-11806611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 159
               

               
Conread position:
               
318-505
               

               
Cow position:
               
chr16:4059486-4059295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 167
               

               
Conread position:
               
319-524
               

               
Cow position:
               
chr16:29608639-29608440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
319-524
               

               
Cow position:
               
chr16:37669608-37669815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
319-524
               

               
Cow position:
               
chr16:40700607-40700807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
320-524
               

               
Cow position:
               
chr16:20069960-20069753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 7
               

               
Conread position:
               
321-481
               

               
Cow position:
               
chr16:33235034-33235202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 88
               

               
Conread position:
               
321-524
               

               
Cow position:
               
chr16:42633616-42633829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 117
               

               
Conread position:
               
322-511
               

               
Cow position:
               
chr16:32807166-32807358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr16:5257122-5256915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
52, 149
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr16:16548735-16548531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr16:17282784-17282586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
324-475
               

               
Cow position:
               
chr16:30358938-30359099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
325-499
               

               
Cow position:
               
chr16:21040154-21039971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
326-524
               

               
Cow position:
               
chr16:5836696-5836499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
327-524
               

               
Cow position:
               
chr16:48494432-48494634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 152
               

               
Conread position:
               
328-475
               

               
Cow position:
               
chr16:12133983-12133825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
328-524
               

               
Cow position:
               
chr16:42241166-42240971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
330-524
               

               
Cow position:
               
chr16:18402805-18402606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 160
               

               
Conread position:
               
331-511
               

               
Cow position:
               
chr16:22919585-22919401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 125
               

               
Conread position:
               
332-524
               

               
Cow position:
               
chr16:4626276-4626470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
333-524
               

               
Cow position:
               
chr16:16933235-16933040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
335-524
               

               
Cow position:
               
chr16:17289061-17288868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 152
               

               
Conread position:
               
340-524
               

               
Cow position:
               
chr16:50382427-50382614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
341-523
               

               
Cow position:
               
chr16:38091115-38091302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 142
               

               
Conread position:
               
341-524
               

               
Cow position:
               
chr16:41696984-41697164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
344-524
               

               
Cow position:
               
chr16:50370699-50370517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 135
               

               
Conread position:
               
355-522
               

               
Cow position:
               
chr16:31122156-31122330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
372-481
               

               
Cow position:
               
chr16:9597381-9597492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
372-520
               

               
Cow position:
               
chr16:36203548-36203699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
372-524
               

               
Cow position:
               
chr16:12060486-12060338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
372-524
               

               
Cow position:
               
chr16:32327728-32327572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
372-524
               

               
Cow position:
               
chr16:39514006-39514154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
372-524
               

               
Cow position:
               
chr16:47643484-47643336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
378-524
               

               
Cow position:
               
chr16:22123906-22124045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
388-524
               

               
Cow position:
               
chr16:50533107-50532974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 87
               

               
Conread position:
               
394-524
               

               
Cow position:
               
chr16:45753407-45753535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 80
               
Show alignments to all cow chromosomes.