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Cow genome map

           
Conread name:
           
rplun0113_m6.y1
        

               
Conread position:
               
6-475
               

               
Cow position:
               
chr5:50600516-50600038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
366, 456
               

               
Conread position:
               
192-446
               

               
Cow position:
               
chr5:50942879-50943138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
194-511
               

               
Cow position:
               
chr5:3626896-3627194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
197-374
               

               
Cow position:
               
chr5:47959982-47960161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 154
               

               
Conread position:
               
206-510
               

               
Cow position:
               
chr5:41935383-41935692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 188
               

               
Conread position:
               
211-473
               

               
Cow position:
               
chr5:52853229-52852965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
159, 36
               

               
Conread position:
               
212-468
               

               
Cow position:
               
chr5:29828312-29828043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
214-452
               

               
Cow position:
               
chr5:73167751-73167998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
44, 128
               

               
Conread position:
               
214-480
               

               
Cow position:
               
chr5:39815238-39815505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
112, 68
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr5:5760048-5760312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
218-368
               

               
Cow position:
               
chr5:18579148-18578998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 103
               

               
Conread position:
               
218-370
               

               
Cow position:
               
chr5:67340138-67339987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
218-374
               

               
Cow position:
               
chr5:56564005-56563854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
218-404
               

               
Cow position:
               
chr5:57447407-57447604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
218-475
               

               
Cow position:
               
chr5:46512509-46512778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
218-480
               

               
Cow position:
               
chr5:16937776-16938035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
174, 112
               

               
Conread position:
               
220-370
               

               
Cow position:
               
chr5:74689996-74690150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
221-374
               

               
Cow position:
               
chr5:47335277-47335128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr5:54751066-54750815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 213
               

               
Conread position:
               
221-473
               

               
Cow position:
               
chr5:56613308-56613573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
221-524
               

               
Cow position:
               
chr5:12902176-12901864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 223
               

               
Conread position:
               
222-524
               

               
Cow position:
               
chr5:3549550-3549840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
223-486
               

               
Cow position:
               
chr5:36868990-36868720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 251
               

               
Conread position:
               
223-524
               

               
Cow position:
               
chr5:63241232-63240923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
104, 253
               

               
Conread position:
               
224-339
               

               
Cow position:
               
chr5:60595861-60595975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
224-461
               

               
Cow position:
               
chr5:11562474-11562719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
224-461
               

               
Cow position:
               
chr5:60514775-60515024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
224-469
               

               
Cow position:
               
chr5:50824835-50824588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
148, 98
               

               
Conread position:
               
224-520
               

               
Cow position:
               
chr5:7057146-7057449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
224-522
               

               
Cow position:
               
chr5:66339327-66339028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 94
               

               
Conread position:
               
224-524
               

               
Cow position:
               
chr5:35826845-35826550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 37
               

               
Conread position:
               
225-365
               

               
Cow position:
               
chr5:63300329-63300187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
116, 104
               

               
Conread position:
               
225-472
               

               
Cow position:
               
chr5:16025231-16025466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
225-474
               

               
Cow position:
               
chr5:55232574-55232820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
132, 23
               

               
Conread position:
               
227-505
               

               
Cow position:
               
chr5:60209897-60210178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 94
               

               
Conread position:
               
227-524
               

               
Cow position:
               
chr5:6438779-6439086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
151, 17
               

               
Conread position:
               
228-510
               

               
Cow position:
               
chr5:49341787-49342088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
90, 263
               

               
Conread position:
               
228-524
               

               
Cow position:
               
chr5:11667937-11668238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
229-377
               

               
Cow position:
               
chr5:74050073-74049921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
229-427
               

               
Cow position:
               
chr5:24915278-24915488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
229-522
               

               
Cow position:
               
chr5:36038756-36039057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
230-439
               

               
Cow position:
               
chr5:11303351-11303139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
230-505
               

               
Cow position:
               
chr5:30233154-30232871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
230-510
               

               
Cow position:
               
chr5:40237434-40237174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
162, 52
               

               
Conread position:
               
230-524
               

               
Cow position:
               
chr5:45472519-45472227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
232-510
               

               
Cow position:
               
chr5:22242530-22242815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
144, 74
               

               
Conread position:
               
233-475
               

               
Cow position:
               
chr5:991716-991454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
233-510
               

               
Cow position:
               
chr5:69099962-69099679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 247
               

               
Conread position:
               
233-524
               

               
Cow position:
               
chr5:16893535-16893826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
139, 87
               

               
Conread position:
               
233-524
               

               
Cow position:
               
chr5:41009767-41010048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 125
               

               
Conread position:
               
233-524
               

               
Cow position:
               
chr5:42845354-42845650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
234-331
               

               
Cow position:
               
chr5:9859135-9859232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
234-337
               

               
Cow position:
               
chr5:70948103-70948206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
234-353
               

               
Cow position:
               
chr5:72160326-72160206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
234-365
               

               
Cow position:
               
chr5:21237651-21237782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 108
               

               
Conread position:
               
234-367
               

               
Cow position:
               
chr5:17253987-17254117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
234-374
               

               
Cow position:
               
chr5:19626818-19626678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
234-374
               

               
Cow position:
               
chr5:25462326-25462188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
234-376
               

               
Cow position:
               
chr5:43982560-43982414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
234-410
               

               
Cow position:
               
chr5:21721234-21721414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
234-429
               

               
Cow position:
               
chr5:19079485-19079289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
136, 94
               

               
Conread position:
               
234-429
               

               
Cow position:
               
chr5:40122365-40122573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
234-434
               

               
Cow position:
               
chr5:15991401-15991608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
234-434
               

               
Cow position:
               
chr5:32976005-32975789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
234-437
               

               
Cow position:
               
chr5:57399009-57399224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 189
               

               
Conread position:
               
234-439
               

               
Cow position:
               
chr5:34288012-34288224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
234-442
               

               
Cow position:
               
chr5:51289358-51289568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
234-448
               

               
Cow position:
               
chr5:26167661-26167439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
234-454
               

               
Cow position:
               
chr5:55965648-55965883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
234-455
               

               
Cow position:
               
chr5:64060688-64060456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
234-456
               

               
Cow position:
               
chr5:7177394-7177160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
234-465
               

               
Cow position:
               
chr5:68537423-68537665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
234-467
               

               
Cow position:
               
chr5:46129425-46129671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 53
               

               
Conread position:
               
234-468
               

               
Cow position:
               
chr5:51053403-51053655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 222
               

               
Conread position:
               
234-468
               

               
Cow position:
               
chr5:64026765-64027022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
234-475
               

               
Cow position:
               
chr5:34914812-34915063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
234-479
               

               
Cow position:
               
chr5:50723289-50723033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
234-510
               

               
Cow position:
               
chr5:69461583-69461291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
36, 253
               

               
Conread position:
               
234-514
               

               
Cow position:
               
chr5:56014964-56014686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 82
               

               
Conread position:
               
234-518
               

               
Cow position:
               
chr5:15364111-15363833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
138, 14
               

               
Conread position:
               
234-518
               

               
Cow position:
               
chr5:63647235-63647521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 205
               

               
Conread position:
               
234-523
               

               
Cow position:
               
chr5:49920166-49919871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr5:4280685-4280395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
136, 14
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr5:18289360-18289077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 86
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr5:24995979-24996276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 72
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr5:35208505-35208210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 185
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr5:42064449-42064150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 208
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr5:44446633-44446921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 86
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr5:57074095-57074386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr5:60016401-60016114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr5:70271111-70270806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr5:72952066-72951788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
158, 89
               

               
Conread position:
               
235-373
               

               
Cow position:
               
chr5:4728312-4728175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
235-374
               

               
Cow position:
               
chr5:54341008-54340866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
235-414
               

               
Cow position:
               
chr5:58401806-58401621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
137, 96
               

               
Conread position:
               
235-415
               

               
Cow position:
               
chr5:60207947-60207759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
235-441
               

               
Cow position:
               
chr5:1693851-1694061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
132, 94
               

               
Conread position:
               
235-454
               

               
Cow position:
               
chr5:56028303-56028528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
235-461
               

               
Cow position:
               
chr5:56467910-56467695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
157, 19
               

               
Conread position:
               
235-464
               

               
Cow position:
               
chr5:7410189-7409953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
235-466
               

               
Cow position:
               
chr5:12654668-12654912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
142, 100
               

               
Conread position:
               
235-466
               

               
Cow position:
               
chr5:61049574-61049331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
235-476
               

               
Cow position:
               
chr5:6520248-6520001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
235-478
               

               
Cow position:
               
chr5:23527409-23527642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
235-478
               

               
Cow position:
               
chr5:30247284-30247533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
99, 236
               

               
Conread position:
               
235-478
               

               
Cow position:
               
chr5:39937359-39937104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
235-489
               

               
Cow position:
               
chr5:6572972-6572725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
235-495
               

               
Cow position:
               
chr5:63627299-63627551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
235-510
               

               
Cow position:
               
chr5:57101556-57101821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
136, 47
               

               
Conread position:
               
235-511
               

               
Cow position:
               
chr5:12322570-12322847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
108, 83
               

               
Conread position:
               
235-520
               

               
Cow position:
               
chr5:74581028-74580744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
235-523
               

               
Cow position:
               
chr5:33834281-33833992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
91, 237
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr5:58688-58987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 247
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr5:26467867-26467570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr5:38833357-38833070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr5:44796495-44796784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr5:47602048-47601766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 13
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr5:49474313-49474602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
137, 106
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr5:61456088-61455792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
236-358
               

               
Cow position:
               
chr5:55414199-55414323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
236-364
               

               
Cow position:
               
chr5:8149069-8149196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
236-369
               

               
Cow position:
               
chr5:55949438-55949574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
236-374
               

               
Cow position:
               
chr5:22957642-22957510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
236-404
               

               
Cow position:
               
chr5:5030679-5030505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
236-451
               

               
Cow position:
               
chr5:44196691-44196915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
236-454
               

               
Cow position:
               
chr5:17828237-17828468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
236-464
               

               
Cow position:
               
chr5:30562166-30561933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
140, 21
               

               
Conread position:
               
236-465
               

               
Cow position:
               
chr5:46681483-46681723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
236-468
               

               
Cow position:
               
chr5:50101138-50101379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
236-483
               

               
Cow position:
               
chr5:74039766-74040021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
236-496
               

               
Cow position:
               
chr5:57101286-57101551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
136, 116
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr5:33273938-33273654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 177
               

               
Conread position:
               
236-508
               

               
Cow position:
               
chr5:22667310-22667040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
100, 205
               

               
Conread position:
               
236-511
               

               
Cow position:
               
chr5:61784482-61784768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 245
               

               
Conread position:
               
236-518
               

               
Cow position:
               
chr5:61914811-61914523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 198
               

               
Conread position:
               
236-524
               

               
Cow position:
               
chr5:25495112-25495402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
236-524
               

               
Cow position:
               
chr5:34562249-34561959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 65
               

               
Conread position:
               
236-524
               

               
Cow position:
               
chr5:41165322-41165033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 83
               

               
Conread position:
               
236-524
               

               
Cow position:
               
chr5:65753103-65752804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
236-524
               

               
Cow position:
               
chr5:72903000-72903282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
135, 88
               

               
Conread position:
               
237-429
               

               
Cow position:
               
chr5:12562520-12562723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
237-429
               

               
Cow position:
               
chr5:20127146-20126940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 40
               

               
Conread position:
               
237-493
               

               
Cow position:
               
chr5:45186876-45187142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
50, 234
               

               
Conread position:
               
237-504
               

               
Cow position:
               
chr5:26548905-26549175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
237-520
               

               
Cow position:
               
chr5:33560499-33560782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
122, 83
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr5:21829104-21828813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr5:35246868-35247163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 229
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr5:43858179-43858486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 171
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr5:57526688-57526971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 199
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr5:57767748-57768034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
238-374
               

               
Cow position:
               
chr5:6245426-6245563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
238-414
               

               
Cow position:
               
chr5:37253660-37253481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
238-427
               

               
Cow position:
               
chr5:29599315-29599508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
134, 9
               

               
Conread position:
               
238-431
               

               
Cow position:
               
chr5:57497188-57497389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
238-448
               

               
Cow position:
               
chr5:26147827-26147609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
238-464
               

               
Cow position:
               
chr5:57062290-57062528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
238-474
               

               
Cow position:
               
chr5:42670635-42670878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 65
               

               
Conread position:
               
238-483
               

               
Cow position:
               
chr5:17105083-17104835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 84
               

               
Conread position:
               
238-504
               

               
Cow position:
               
chr5:8736039-8736323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
103, 250
               

               
Conread position:
               
238-524
               

               
Cow position:
               
chr5:12434773-12434480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
134, 80
               

               
Conread position:
               
238-524
               

               
Cow position:
               
chr5:12557048-12557345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 238
               

               
Conread position:
               
238-524
               

               
Cow position:
               
chr5:56071094-56070803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
238-524
               

               
Cow position:
               
chr5:57934882-57935162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
136, 78
               

               
Conread position:
               
238-524
               

               
Cow position:
               
chr5:72895925-72895634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
18, 240
               

               
Conread position:
               
239-365
               

               
Cow position:
               
chr5:20407238-20407366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
239-413
               

               
Cow position:
               
chr5:49207091-49207274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
239-416
               

               
Cow position:
               
chr5:29895409-29895221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
239-434
               

               
Cow position:
               
chr5:16185617-16185411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 203
               

               
Conread position:
               
239-463
               

               
Cow position:
               
chr5:40241972-40241747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
239-464
               

               
Cow position:
               
chr5:7012612-7012846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
239-469
               

               
Cow position:
               
chr5:43604377-43604138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 109
               

               
Conread position:
               
239-471
               

               
Cow position:
               
chr5:35969777-35969527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
239-474
               

               
Cow position:
               
chr5:30276924-30276681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
239-475
               

               
Cow position:
               
chr5:31052625-31052370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
239-511
               

               
Cow position:
               
chr5:69338051-69337783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
133, 61
               

               
Conread position:
               
239-522
               

               
Cow position:
               
chr5:42050781-42050500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
133, 56
               

               
Conread position:
               
239-524
               

               
Cow position:
               
chr5:37646315-37646599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
239-524
               

               
Cow position:
               
chr5:45225581-45225877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
240-408
               

               
Cow position:
               
chr5:52211456-52211629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
132, 7
               

               
Conread position:
               
240-412
               

               
Cow position:
               
chr5:74065284-74065463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
130, 115
               

               
Conread position:
               
240-443
               

               
Cow position:
               
chr5:35190342-35190132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
240-468
               

               
Cow position:
               
chr5:44847791-44848027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 80
               

               
Conread position:
               
240-468
               

               
Cow position:
               
chr5:73253641-73253408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
136, 168
               

               
Conread position:
               
240-469
               

               
Cow position:
               
chr5:25035018-25035259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 175
               

               
Conread position:
               
240-505
               

               
Cow position:
               
chr5:57686512-57686775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
240-522
               

               
Cow position:
               
chr5:30845342-30845062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
136, 105
               

               
Conread position:
               
240-524
               

               
Cow position:
               
chr5:15479365-15479071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 240
               

               
Conread position:
               
240-524
               

               
Cow position:
               
chr5:53835957-53835660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
81, 230
               

               
Conread position:
               
240-524
               

               
Cow position:
               
chr5:70951656-70951929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
241-373
               

               
Cow position:
               
chr5:4824387-4824252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
241-377
               

               
Cow position:
               
chr5:34639359-34639219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
241-414
               

               
Cow position:
               
chr5:34918576-34918398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
241-426
               

               
Cow position:
               
chr5:70591777-70591594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 41
               

               
Conread position:
               
241-430
               

               
Cow position:
               
chr5:62996194-62995993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
241-447
               

               
Cow position:
               
chr5:54312834-54312619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
241-453
               

               
Cow position:
               
chr5:55942142-55942367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
241-465
               

               
Cow position:
               
chr5:53935319-53935547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
118, 79
               

               
Conread position:
               
241-506
               

               
Cow position:
               
chr5:28302521-28302785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
131, 41
               

               
Conread position:
               
241-511
               

               
Cow position:
               
chr5:20288023-20288304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 252
               

               
Conread position:
               
241-511
               

               
Cow position:
               
chr5:53055325-53055609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 6
               

               
Conread position:
               
241-524
               

               
Cow position:
               
chr5:19752537-19752252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
241-524
               

               
Cow position:
               
chr5:35685168-35684883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
67, 43
               

               
Conread position:
               
242-370
               

               
Cow position:
               
chr5:20736646-20736773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
242-424
               

               
Cow position:
               
chr5:6876731-6876926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
242-429
               

               
Cow position:
               
chr5:7675924-7676118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 93
               

               
Conread position:
               
242-475
               

               
Cow position:
               
chr5:64139798-64139549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
242-503
               

               
Cow position:
               
chr5:22795440-22795181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
242-505
               

               
Cow position:
               
chr5:9893891-9894160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
242-511
               

               
Cow position:
               
chr5:65967503-65967774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
242-523
               

               
Cow position:
               
chr5:64140772-64140481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 238
               

               
Conread position:
               
242-524
               

               
Cow position:
               
chr5:2309324-2309609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 230
               

               
Conread position:
               
242-524
               

               
Cow position:
               
chr5:66972663-66972375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
243-356
               

               
Cow position:
               
chr5:6669906-6670024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
243-370
               

               
Cow position:
               
chr5:43408107-43408236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
243-437
               

               
Cow position:
               
chr5:6086109-6086315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
243-438
               

               
Cow position:
               
chr5:49821664-49821455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
243-452
               

               
Cow position:
               
chr5:5016656-5016442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
243-468
               

               
Cow position:
               
chr5:35784772-35784990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
243-473
               

               
Cow position:
               
chr5:39036015-39035772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
243-478
               

               
Cow position:
               
chr5:5257054-5257299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
72, 234
               

               
Conread position:
               
243-522
               

               
Cow position:
               
chr5:35459063-35459347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
243-524
               

               
Cow position:
               
chr5:43922937-43923211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
243-524
               

               
Cow position:
               
chr5:56877703-56877432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
243-524
               

               
Cow position:
               
chr5:61726190-61725915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
133, 66
               

               
Conread position:
               
243-524
               

               
Cow position:
               
chr5:64321995-64321699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
15, 228
               

               
Conread position:
               
244-373
               

               
Cow position:
               
chr5:49508568-49508696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
244-452
               

               
Cow position:
               
chr5:51246905-51247118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
134, 38
               

               
Conread position:
               
244-482
               

               
Cow position:
               
chr5:51065748-51065513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 112
               

               
Conread position:
               
244-524
               

               
Cow position:
               
chr5:30487459-30487184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 127
               

               
Conread position:
               
245-413
               

               
Cow position:
               
chr5:60100694-60100523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
8, 76
               

               
Conread position:
               
245-413
               

               
Cow position:
               
chr5:60153999-60153828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
245-448
               

               
Cow position:
               
chr5:65552490-65552694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
133, 39
               

               
Conread position:
               
245-452
               

               
Cow position:
               
chr5:2240758-2240976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 191
               

               
Conread position:
               
245-468
               

               
Cow position:
               
chr5:56860674-56860444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 104
               

               
Conread position:
               
245-510
               

               
Cow position:
               
chr5:63192523-63192781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
245-517
               

               
Cow position:
               
chr5:45845459-45845740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 114
               

               
Conread position:
               
245-524
               

               
Cow position:
               
chr5:8023984-8024248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
245-524
               

               
Cow position:
               
chr5:62172629-62172361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 42
               

               
Conread position:
               
246-422
               

               
Cow position:
               
chr5:31648645-31648464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
114, 158
               

               
Conread position:
               
246-511
               

               
Cow position:
               
chr5:44028080-44028345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
246-524
               

               
Cow position:
               
chr5:5856090-5855810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 223
               

               
Conread position:
               
247-428
               

               
Cow position:
               
chr5:35394210-35394395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
125, 81
               

               
Conread position:
               
247-475
               

               
Cow position:
               
chr5:46540831-46541065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
247-510
               

               
Cow position:
               
chr5:11769501-11769230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
79, 179
               

               
Conread position:
               
247-524
               

               
Cow position:
               
chr5:56524391-56524116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
248-374
               

               
Cow position:
               
chr5:48104488-48104361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
248-374
               

               
Cow position:
               
chr5:64061241-64061119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
248-406
               

               
Cow position:
               
chr5:34787800-34787634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
248-468
               

               
Cow position:
               
chr5:20128283-20128049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
248-474
               

               
Cow position:
               
chr5:19278475-19278715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
248-475
               

               
Cow position:
               
chr5:35976722-35976503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
248-481
               

               
Cow position:
               
chr5:51298487-51298729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
124, 161
               

               
Conread position:
               
248-511
               

               
Cow position:
               
chr5:65941022-65941292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr5:14550354-14550634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
70, 228
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr5:17086789-17087075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 252
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr5:21617683-21617404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 88
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr5:29903315-29903571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr5:47757000-47756722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr5:52164945-52165231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
68, 230
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr5:59626744-59627027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 115
               

               
Conread position:
               
248-524
               

               
Cow position:
               
chr5:66257862-66257585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
124, 159
               

               
Conread position:
               
249-428
               

               
Cow position:
               
chr5:3817460-3817649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
249-463
               

               
Cow position:
               
chr5:60948359-60948135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 162
               

               
Conread position:
               
249-475
               

               
Cow position:
               
chr5:3582782-3582550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
249-524
               

               
Cow position:
               
chr5:30303108-30302840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 119
               

               
Conread position:
               
249-524
               

               
Cow position:
               
chr5:30628926-30629211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 112
               

               
Conread position:
               
249-524
               

               
Cow position:
               
chr5:34625175-34624904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
139, 117
               

               
Conread position:
               
250-365
               

               
Cow position:
               
chr5:63940228-63940339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
250-373
               

               
Cow position:
               
chr5:44836761-44836643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
250-374
               

               
Cow position:
               
chr5:46479021-46479142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
250-374
               

               
Cow position:
               
chr5:52849307-52849185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
250-413
               

               
Cow position:
               
chr5:52192212-52192376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
250-429
               

               
Cow position:
               
chr5:74887673-74887863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
250-469
               

               
Cow position:
               
chr5:34347507-34347731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 174
               

               
Conread position:
               
250-472
               

               
Cow position:
               
chr5:56548792-56548565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
128, 80
               

               
Conread position:
               
250-522
               

               
Cow position:
               
chr5:74643458-74643722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
250-523
               

               
Cow position:
               
chr5:7044480-7044759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 226
               

               
Conread position:
               
250-524
               

               
Cow position:
               
chr5:20843172-20843453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 94
               

               
Conread position:
               
250-524
               

               
Cow position:
               
chr5:43403135-43402847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 112
               

               
Conread position:
               
250-524
               

               
Cow position:
               
chr5:47870828-47871096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
251-374
               

               
Cow position:
               
chr5:21520225-21520341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
251-374
               

               
Cow position:
               
chr5:35235462-35235589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
251-442
               

               
Cow position:
               
chr5:37842054-37842256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
251-464
               

               
Cow position:
               
chr5:44810012-44810238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
251-522
               

               
Cow position:
               
chr5:11229446-11229720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
251-524
               

               
Cow position:
               
chr5:5110833-5111128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
251-524
               

               
Cow position:
               
chr5:35763469-35763222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
251-524
               

               
Cow position:
               
chr5:55756188-55756478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 229
               

               
Conread position:
               
251-524
               

               
Cow position:
               
chr5:55966648-55966932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
252-472
               

               
Cow position:
               
chr5:27155226-27155010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
252-473
               

               
Cow position:
               
chr5:12760896-12761126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
252-478
               

               
Cow position:
               
chr5:64175906-64176140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
252-504
               

               
Cow position:
               
chr5:14920702-14920965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
61, 215
               

               
Conread position:
               
252-524
               

               
Cow position:
               
chr5:14314740-14314472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 69
               

               
Conread position:
               
252-524
               

               
Cow position:
               
chr5:30253964-30253688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
252-524
               

               
Cow position:
               
chr5:40109708-40109438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 68
               

               
Conread position:
               
253-466
               

               
Cow position:
               
chr5:11539829-11540051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
253-473
               

               
Cow position:
               
chr5:35228921-35229146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
254-406
               

               
Cow position:
               
chr5:66287163-66287005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
254-442
               

               
Cow position:
               
chr5:44722291-44722489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
254-445
               

               
Cow position:
               
chr5:41885136-41884940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
254-452
               

               
Cow position:
               
chr5:75227991-75228186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
138, 98
               

               
Conread position:
               
254-473
               

               
Cow position:
               
chr5:4267882-4267662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
254-473
               

               
Cow position:
               
chr5:69383473-69383247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 87
               

               
Conread position:
               
254-475
               

               
Cow position:
               
chr5:60523949-60523723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
118, 71
               

               
Conread position:
               
255-437
               

               
Cow position:
               
chr5:44734506-44734697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
255-466
               

               
Cow position:
               
chr5:72045456-72045675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
255-494
               

               
Cow position:
               
chr5:29460422-29460186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
256-374
               

               
Cow position:
               
chr5:64142434-64142555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
256-524
               

               
Cow position:
               
chr5:63234602-63234879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 190
               

               
Conread position:
               
256-524
               

               
Cow position:
               
chr5:65136477-65136220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 19
               

               
Conread position:
               
256-524
               

               
Cow position:
               
chr5:66466533-66466265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
257-510
               

               
Cow position:
               
chr5:20779180-20779435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
77, 180
               

               
Conread position:
               
257-510
               

               
Cow position:
               
chr5:66551673-66551938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 233
               

               
Conread position:
               
259-499
               

               
Cow position:
               
chr5:53947116-53946868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 210
               

               
Conread position:
               
261-437
               

               
Cow position:
               
chr5:16668908-16668725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
261-524
               

               
Cow position:
               
chr5:12673265-12673521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 148
               

               
Conread position:
               
261-524
               

               
Cow position:
               
chr5:17554820-17555085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 210
               

               
Conread position:
               
262-510
               

               
Cow position:
               
chr5:72006283-72006532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
263-448
               

               
Cow position:
               
chr5:5847631-5847828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 12
               

               
Conread position:
               
263-462
               

               
Cow position:
               
chr5:38169105-38168897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
264-429
               

               
Cow position:
               
chr5:51233812-51233982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
264-444
               

               
Cow position:
               
chr5:38040356-38040543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
264-452
               

               
Cow position:
               
chr5:12351600-12351794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
264-524
               

               
Cow position:
               
chr5:68719079-68718816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
266-524
               

               
Cow position:
               
chr5:64523654-64523920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 215
               

               
Conread position:
               
273-453
               

               
Cow position:
               
chr5:46704097-46704287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
273-479
               

               
Cow position:
               
chr5:57419593-57419808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
273-514
               

               
Cow position:
               
chr5:49501615-49501868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 212
               

               
Conread position:
               
273-524
               

               
Cow position:
               
chr5:6503673-6503936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 213
               

               
Conread position:
               
274-510
               

               
Cow position:
               
chr5:55795768-55796004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
275-522
               

               
Cow position:
               
chr5:66366710-66366456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
62, 133
               

               
Conread position:
               
277-465
               

               
Cow position:
               
chr5:2469011-2469207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
277-499
               

               
Cow position:
               
chr5:54350172-54350391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
277-524
               

               
Cow position:
               
chr5:12247542-12247799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
280-457
               

               
Cow position:
               
chr5:54425647-54425477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
112, 50
               

               
Conread position:
               
280-511
               

               
Cow position:
               
chr5:71724485-71724260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
282-457
               

               
Cow position:
               
chr5:15721892-15722066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
110, 84
               

               
Conread position:
               
282-481
               

               
Cow position:
               
chr5:56334326-56334524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
282-524
               

               
Cow position:
               
chr5:45397761-45397519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
96, 126
               

               
Conread position:
               
284-468
               

               
Cow position:
               
chr5:6286257-6286436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
108, 46
               

               
Conread position:
               
286-510
               

               
Cow position:
               
chr5:17602015-17602240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
290-506
               

               
Cow position:
               
chr5:7193599-7193382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
292-524
               

               
Cow position:
               
chr5:60183984-60183748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
306-520
               

               
Cow position:
               
chr5:67118588-67118369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
63, 166
               

               
Conread position:
               
310-454
               

               
Cow position:
               
chr5:62378940-62378794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
316-454
               

               
Cow position:
               
chr5:44726177-44726323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
316-475
               

               
Cow position:
               
chr5:4166798-4166632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
316-522
               

               
Cow position:
               
chr5:23168668-23168880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 148
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr5:30949755-30949969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 169
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr5:40242202-40241989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
26, 168
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr5:43929578-43929790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr5:43992482-43992269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 159
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr5:46509708-46509920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr5:56338863-56339071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
317-468
               

               
Cow position:
               
chr5:69636377-69636221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
317-524
               

               
Cow position:
               
chr5:16205998-16206208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 121
               

               
Conread position:
               
318-524
               

               
Cow position:
               
chr5:24136870-24136660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
319-511
               

               
Cow position:
               
chr5:61102871-61102674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 163
               

               
Conread position:
               
319-517
               

               
Cow position:
               
chr5:35982584-35982787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
319-524
               

               
Cow position:
               
chr5:50533233-50533440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
319-524
               

               
Cow position:
               
chr5:64591940-64592147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 167
               

               
Conread position:
               
321-469
               

               
Cow position:
               
chr5:24069540-24069386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
321-474
               

               
Cow position:
               
chr5:9170431-9170589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
322-524
               

               
Cow position:
               
chr5:6045448-6045238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
57, 155
               

               
Conread position:
               
323-522
               

               
Cow position:
               
chr5:45574771-45574564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
53, 164
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr5:7698151-7697952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
54, 148
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr5:25230866-25231063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr5:41545742-41545947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 158
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr5:49440725-49440925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 152
               

               
Conread position:
               
324-521
               

               
Cow position:
               
chr5:26851840-26851650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
324-524
               

               
Cow position:
               
chr5:54375352-54375560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 148
               

               
Conread position:
               
325-523
               

               
Cow position:
               
chr5:63150019-63150219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
325-524
               

               
Cow position:
               
chr5:74016087-74015887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
335-510
               

               
Cow position:
               
chr5:56517243-56517063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
341-520
               

               
Cow position:
               
chr5:45804193-45804010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
341-522
               

               
Cow position:
               
chr5:50821916-50821731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
345-503
               

               
Cow position:
               
chr5:15598109-15598270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
370-511
               

               
Cow position:
               
chr5:33537965-33537828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
372-522
               

               
Cow position:
               
chr5:14629715-14629864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
372-524
               

               
Cow position:
               
chr5:31640520-31640367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
372-524
               

               
Cow position:
               
chr5:65883677-65883826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
372-524
               

               
Cow position:
               
chr5:67212456-67212303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 108
               

               
Conread position:
               
373-505
               

               
Cow position:
               
chr5:20407584-20407714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 108
               

               
Conread position:
               
391-524
               

               
Cow position:
               
chr5:34638959-34638831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 75
               
Show alignments to all cow chromosomes.