Cow genome map

Conread name: rplun0113_m6.y1

Conread position: 199-522
Cow position: chrX:39353051-39352730 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 131, 182

Conread position: 199-524
Cow position: chrX:1466442-1466109 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 36

Conread position: 206-471
Cow position: chrX:39179954-39180239 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 211-429
Cow position: chrX:44995769-44995536 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 211-453
Cow position: chrX:20957505-20957251 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 13

Conread position: 212-524
Cow position: chrX:32821302-32820978 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 111, 15

Conread position: 213-475
Cow position: chrX:4632592-4632866 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 121, 21

Conread position: 214-511
Cow position: chrX:2523438-2523717 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 178, 12

Conread position: 215-496
Cow position: chrX:31489784-31489494 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 269

Conread position: 216-520
Cow position: chrX:12095510-12095821 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 101, 30

Conread position: 218-523
Cow position: chrX:41790168-41790496 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 221
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 8

Conread position: 219-510
Cow position: chrX:16984891-16984589 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 26

Conread position: 219-524
Cow position: chrX:5637918-5638220 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 110

Conread position: 221-364
Cow position: chrX:1938268-1938125 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 114, 13

Conread position: 221-524
Cow position: chrX:11072962-11073244 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 38

Conread position: 222-325
Cow position: chrX:7763949-7763845 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 223-369
Cow position: chrX:40457310-40457454 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 224-374
Cow position: chrX:40108093-40108242 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 119, 10

Conread position: 224-374
Cow position: chrX:43059003-43059150 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 224-448
Cow position: chrX:20345705-20345471 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 93, 216

Conread position: 224-468
Cow position: chrX:4996843-4996583 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 224-471
Cow position: chrX:27668709-27668963 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 10

Conread position: 224-472
Cow position: chrX:34836820-34837069 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 147, 22

Conread position: 224-478
Cow position: chrX:26205204-26205460 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 152, 39

Conread position: 224-505
Cow position: chrX:12979579-12979870 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 224-524
Cow position: chrX:33001153-33000851 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 19, 99

Conread position: 224-524
Cow position: chrX:35986069-35985766 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 98, 58

Conread position: 225-374
Cow position: chrX:42216380-42216530 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 225-442
Cow position: chrX:32867122-32866899 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 147, 21

Conread position: 226-453
Cow position: chrX:15546136-15545895 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 17, 62

Conread position: 227-352
Cow position: chrX:38080400-38080270 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 227-447
Cow position: chrX:19717762-19717540 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 149, 54

Conread position: 227-468
Cow position: chrX:4268821-4269067 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 144, 20

Conread position: 227-470
Cow position: chrX:4327931-4328187 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 130

Conread position: 227-481
Cow position: chrX:12972929-12972666 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 145, 108

Conread position: 227-508
Cow position: chrX:12437034-12437306 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 151, 19

Conread position: 227-510
Cow position: chrX:45228726-45228442 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 113

Conread position: 227-511
Cow position: chrX:4289685-4289400 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 91

Conread position: 227-524
Cow position: chrX:34565534-34565229 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 91, 19

Conread position: 227-524
Cow position: chrX:38218967-38218658 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 20, 254

Conread position: 227-524
Cow position: chrX:45598357-45598653 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 132, 208

Conread position: 228-374
Cow position: chrX:29681867-29682010 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 23, 79

Conread position: 228-374
Cow position: chrX:43028479-43028333 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 228-423
Cow position: chrX:597228-597430 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 228-485
Cow position: chrX:32942828-32943097 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 24, 56

Conread position: 229-429
Cow position: chrX:27270618-27270413 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 147, 58

Conread position: 229-447
Cow position: chrX:5026500-5026275 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 56, 107

Conread position: 229-468
Cow position: chrX:17956938-17956691 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 92, 210

Conread position: 230-523
Cow position: chrX:46532242-46532552 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 294

Conread position: 231-427
Cow position: chrX:41454706-41454914 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 232-374
Cow position: chrX:37177113-37176975 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 232-455
Cow position: chrX:29467535-29467767 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 22, 92

Conread position: 232-461
Cow position: chrX:17524137-17524379 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 233-474
Cow position: chrX:9634947-9635197 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 101, 51

Conread position: 233-524
Cow position: chrX:12290963-12290670 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 87, 240

Conread position: 233-524
Cow position: chrX:13122189-13121878 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 233-524
Cow position: chrX:27261435-27261136 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 98, 46

Conread position: 234-324
Cow position: chrX:33153759-33153669 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 234-407
Cow position: chrX:42087070-42086887 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 47

Conread position: 234-411
Cow position: chrX:41199465-41199280 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 137, 20

Conread position: 234-415
Cow position: chrX:12988-12802 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 99

Conread position: 234-424
Cow position: chrX:16763686-16763882 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 142, 86

Conread position: 234-427
Cow position: chrX:35409996-35409792 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 234-430
Cow position: chrX:34991606-34991401 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 166
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 234-446
Cow position: chrX:20340414-20340623 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 158, 118

Conread position: 234-452
Cow position: chrX:35285419-35285187 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 234-460
Cow position: chrX:19018585-19018825 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 20

Conread position: 234-461
Cow position: chrX:4559977-4559744 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 13

Conread position: 234-468
Cow position: chrX:13177240-13177481 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 47

Conread position: 234-469
Cow position: chrX:27446929-27446684 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 17, 240

Conread position: 234-469
Cow position: chrX:48237062-48236813 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 175

Conread position: 234-472
Cow position: chrX:1175746-1175988 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 97, 68

Conread position: 234-472
Cow position: chrX:30962631-30962881 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 89, 235

Conread position: 234-475
Cow position: chrX:27145844-27145594 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 90

Conread position: 234-478
Cow position: chrX:16836049-16836299 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 17, 85

Conread position: 234-478
Cow position: chrX:27431681-27431928 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 136, 13

Conread position: 234-503
Cow position: chrX:5118254-5118534 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 90, 111

Conread position: 234-503
Cow position: chrX:43008853-43008568 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 13

Conread position: 234-505
Cow position: chrX:25815655-25815941 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 234-506
Cow position: chrX:1087903-1088179 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 22, 84

Conread position: 234-520
Cow position: chrX:31729681-31729394 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 86

Conread position: 234-522
Cow position: chrX:11633926-11633630 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 86, 250

Conread position: 234-524
Cow position: chrX:4152800-4153087 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 83

Conread position: 234-524
Cow position: chrX:5919733-5919438 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 224
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 18, 50

Conread position: 234-524
Cow position: chrX:6414276-6413996 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 158, 47

Conread position: 234-524
Cow position: chrX:9650780-9651077 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 241

Conread position: 234-524
Cow position: chrX:23513765-23514067 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 87, 37

Conread position: 234-524
Cow position: chrX:27207037-27206757 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 20

Conread position: 234-524
Cow position: chrX:34412094-34411790 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 252

Conread position: 234-524
Cow position: chrX:34504810-34505103 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 27

Conread position: 234-524
Cow position: chrX:36866417-36866119 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 88, 241

Conread position: 234-524
Cow position: chrX:45110894-45110604 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 138, 20

Conread position: 234-524
Cow position: chrX:45977167-45976870 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 14

Conread position: 234-524
Cow position: chrX:46291385-46291086 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 138, 121

Conread position: 235-374
Cow position: chrX:41215566-41215423 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 235-410
Cow position: chrX:51660-51844 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 19

Conread position: 235-423
Cow position: chrX:42875453-42875256 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 235-430
Cow position: chrX:5487706-5487895 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 159, 19

Conread position: 235-431
Cow position: chrX:31983335-31983549 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 235-436
Cow position: chrX:41453542-41453332 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 134, 0

Conread position: 235-440
Cow position: chrX:23358874-23359085 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 137, 174

Conread position: 235-448
Cow position: chrX:47855219-47854999 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 143, 20

Conread position: 235-466
Cow position: chrX:36356347-36356112 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 169

Conread position: 235-469
Cow position: chrX:5063479-5063248 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 40

Conread position: 235-475
Cow position: chrX:44055046-44054792 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 235-498
Cow position: chrX:28940487-28940219 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 94, 228

Conread position: 235-510
Cow position: chrX:35822574-35822304 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 136, 49

Conread position: 235-522
Cow position: chrX:24332020-24331729 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 82, 234

Conread position: 235-524
Cow position: chrX:8869161-8869456 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 241

Conread position: 235-524
Cow position: chrX:20887407-20887697 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 121, 20

Conread position: 235-524
Cow position: chrX:34441210-34441503 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 97, 213

Conread position: 235-524
Cow position: chrX:34532755-34532469 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 47

Conread position: 235-524
Cow position: chrX:35885489-35885779 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 141, 85

Conread position: 235-524
Cow position: chrX:38321139-38321439 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 255

Conread position: 236-374
Cow position: chrX:14135916-14135779 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 236-404
Cow position: chrX:40556221-40556396 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 122, 75

Conread position: 236-414
Cow position: chrX:11529580-11529395 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 136, 88

Conread position: 236-429
Cow position: chrX:8759865-8759661 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 236-429
Cow position: chrX:11454415-11454224 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 75, 11

Conread position: 236-469
Cow position: chrX:11656319-11656078 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 12

Conread position: 236-471
Cow position: chrX:42480069-42479828 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 41

Conread position: 236-472
Cow position: chrX:47345573-47345320 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 236-510
Cow position: chrX:42894165-42893879 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 73

Conread position: 236-511
Cow position: chrX:19394797-19394513 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 255

Conread position: 236-514
Cow position: chrX:6599532-6599826 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 251

Conread position: 236-522
Cow position: chrX:41526292-41526573 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 142, 56

Conread position: 236-524
Cow position: chrX:152146-151853 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 88, 11

Conread position: 236-524
Cow position: chrX:7722216-7721937 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 45

Conread position: 236-524
Cow position: chrX:29050484-29050195 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 55

Conread position: 236-524
Cow position: chrX:42246939-42247238 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 239

Conread position: 237-408
Cow position: chrX:39642387-39642564 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 139, 80

Conread position: 237-417
Cow position: chrX:48372261-48372445 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 133, 42

Conread position: 237-429
Cow position: chrX:17498564-17498360 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 237-448
Cow position: chrX:19356705-19356487 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 148

Conread position: 237-468
Cow position: chrX:39290597-39290357 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 110

Conread position: 237-469
Cow position: chrX:13924103-13923861 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 237-469
Cow position: chrX:25207619-25207858 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 13, 99

Conread position: 237-478
Cow position: chrX:29230249-29229987 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 237-496
Cow position: chrX:20339654-20339915 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 85, 45

Conread position: 237-505
Cow position: chrX:27705828-27705554 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 61

Conread position: 237-523
Cow position: chrX:22115073-22115367 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 237

Conread position: 237-524
Cow position: chrX:5134714-5134423 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 66, 17

Conread position: 237-524
Cow position: chrX:20584552-20584272 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 17

Conread position: 237-524
Cow position: chrX:41878696-41878985 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 49

Conread position: 237-524
Cow position: chrX:42927589-42927871 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 58

Conread position: 238-364
Cow position: chrX:37717964-37717832 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 238-407
Cow position: chrX:11589127-11589307 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 238-420
Cow position: chrX:17744862-17744678 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 238-438
Cow position: chrX:2314378-2314591 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 238-446
Cow position: chrX:35659034-35658819 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 43

Conread position: 238-447
Cow position: chrX:32877140-32877356 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 10

Conread position: 238-451
Cow position: chrX:46068524-46068744 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 121, 30

Conread position: 238-461
Cow position: chrX:6559215-6559443 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 145

Conread position: 238-474
Cow position: chrX:11762771-11763007 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 134, 82

Conread position: 238-481
Cow position: chrX:33539390-33539157 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 154, 16

Conread position: 238-510
Cow position: chrX:6544485-6544217 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 138, 95

Conread position: 238-511
Cow position: chrX:11325867-11326139 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 132

Conread position: 238-522
Cow position: chrX:41871298-41871015 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 66

Conread position: 238-524
Cow position: chrX:4399358-4399071 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 211

Conread position: 238-524
Cow position: chrX:27175240-27174944 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 187

Conread position: 238-524
Cow position: chrX:33854985-33855285 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 44

Conread position: 238-524
Cow position: chrX:45502375-45502093 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 136, 43

Conread position: 239-364
Cow position: chrX:1996212-1996341 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 239-369
Cow position: chrX:29723991-29723857 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 120

Conread position: 239-374
Cow position: chrX:4486785-4486923 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 239-375
Cow position: chrX:38726905-38727038 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 239-410
Cow position: chrX:17525639-17525810 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 133, 15

Conread position: 239-423
Cow position: chrX:20666662-20666857 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 125

Conread position: 239-429
Cow position: chrX:8642284-8642084 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 239-510
Cow position: chrX:24749326-24749049 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 91, 74

Conread position: 239-519
Cow position: chrX:36367695-36367989 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 121

Conread position: 239-521
Cow position: chrX:22392749-22393035 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 106

Conread position: 240-448
Cow position: chrX:20583899-20583684 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 175
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 9, 42

Conread position: 240-508
Cow position: chrX:40531788-40532080 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 50, 252

Conread position: 240-510
Cow position: chrX:27306677-27306414 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 132, 71

Conread position: 240-511
Cow position: chrX:34315764-34315477 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 14

Conread position: 240-522
Cow position: chrX:40680853-40680561 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 87, 239

Conread position: 240-524
Cow position: chrX:38964334-38964053 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 131, 14

Conread position: 240-524
Cow position: chrX:42855702-42855403 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 11, 241

Conread position: 241-373
Cow position: chrX:35029698-35029824 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 24

Conread position: 241-413
Cow position: chrX:5915429-5915242 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 241-429
Cow position: chrX:37751874-37752068 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 130, 72

Conread position: 241-429
Cow position: chrX:48822105-48822304 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 241-448
Cow position: chrX:31480203-31479989 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 107, 153

Conread position: 241-465
Cow position: chrX:42380875-42381111 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 88, 40

Conread position: 241-466
Cow position: chrX:24054899-24054671 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 79

Conread position: 241-473
Cow position: chrX:30337716-30337959 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 175

Conread position: 241-473
Cow position: chrX:42492285-42492530 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 88, 7

Conread position: 241-505
Cow position: chrX:22482452-22482732 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 100, 256

Conread position: 241-522
Cow position: chrX:43115386-43115102 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 84, 181

Conread position: 241-524
Cow position: chrX:1499891-1499615 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 124, 90

Conread position: 241-524
Cow position: chrX:13147221-13146929 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 228

Conread position: 241-524
Cow position: chrX:34792086-34792360 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 137, 40

Conread position: 242-373
Cow position: chrX:41959983-41959856 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 242-406
Cow position: chrX:4750102-4750271 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 48

Conread position: 242-421
Cow position: chrX:42461391-42461572 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 106, 78

Conread position: 242-447
Cow position: chrX:908177-907965 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 242-464
Cow position: chrX:24170489-24170727 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 242-471
Cow position: chrX:41238126-41238359 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 117, 81

Conread position: 242-510
Cow position: chrX:13913311-13913029 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 83, 242

Conread position: 242-518
Cow position: chrX:37072622-37072348 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 212

Conread position: 242-524
Cow position: chrX:6407780-6407492 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 81, 198

Conread position: 242-524
Cow position: chrX:19469279-19469558 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 80

Conread position: 242-524
Cow position: chrX:34314257-34313977 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 198

Conread position: 242-524
Cow position: chrX:44339086-44339376 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 5

Conread position: 243-364
Cow position: chrX:3494815-3494936 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 243-496
Cow position: chrX:31442604-31442855 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 133, 77

Conread position: 243-510
Cow position: chrX:34377174-34376908 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 129, 220

Conread position: 243-522
Cow position: chrX:30133089-30133370 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 90, 42

Conread position: 243-524
Cow position: chrX:40035207-40035495 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 21

Conread position: 244-468
Cow position: chrX:27511650-27511426 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 88, 25

Conread position: 244-469
Cow position: chrX:32910332-32910101 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 8, 0

Conread position: 244-524
Cow position: chrX:14883722-14884010 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 238

Conread position: 245-430
Cow position: chrX:6480362-6480559 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 72, 191

Conread position: 246-350
Cow position: chrX:38726168-38726066 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 246-377
Cow position: chrX:47979530-47979395 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 77, 29

Conread position: 246-429
Cow position: chrX:37749762-37749945 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 130, 18

Conread position: 246-446
Cow position: chrX:28068083-28067870 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 246-476
Cow position: chrX:33654611-33654854 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 246-524
Cow position: chrX:8925913-8925649 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 6, 88

Conread position: 246-524
Cow position: chrX:38094294-38094573 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 124, 38

Conread position: 247-425
Cow position: chrX:23471637-23471824 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 89, 0

Conread position: 247-464
Cow position: chrX:10251971-10252196 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 87, 168

Conread position: 247-524
Cow position: chrX:9251932-9252214 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 237

Conread position: 247-524
Cow position: chrX:29601597-29601882 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 232

Conread position: 248-374
Cow position: chrX:231796-231917 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 248-374
Cow position: chrX:47730711-47730583 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 248-410
Cow position: chrX:23497467-23497634 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 128, 72

Conread position: 248-419
Cow position: chrX:41166599-41166777 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 99, 93

Conread position: 248-466
Cow position: chrX:2936183-2935957 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 87

Conread position: 248-472
Cow position: chrX:42432284-42432519 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 128, 77

Conread position: 248-473
Cow position: chrX:3806909-3806677 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 8, 88

Conread position: 248-484
Cow position: chrX:40337141-40336891 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 69, 170

Conread position: 248-510
Cow position: chrX:38560780-38560520 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 123, 72

Conread position: 248-510
Cow position: chrX:38853441-38853159 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 75, 180

Conread position: 248-523
Cow position: chrX:46072600-46072871 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 140, 117

Conread position: 248-524
Cow position: chrX:296622-296343 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 183

Conread position: 248-524
Cow position: chrX:24365592-24365877 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 233

Conread position: 248-524
Cow position: chrX:26881332-26881620 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 49

Conread position: 248-524
Cow position: chrX:29541998-29542271 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 126

Conread position: 248-524
Cow position: chrX:37575046-37574792 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 144, 84

Conread position: 248-524
Cow position: chrX:37780881-37781163 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 36

Conread position: 249-375
Cow position: chrX:34432574-34432694 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 249-456
Cow position: chrX:32208598-32208812 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 122, 51

Conread position: 249-460
Cow position: chrX:31744786-31744999 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 58

Conread position: 249-466
Cow position: chrX:36283569-36283338 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 249-475
Cow position: chrX:45699751-45699980 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 167, 86

Conread position: 249-511
Cow position: chrX:47248568-47248825 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 183, 83

Conread position: 249-524
Cow position: chrX:34554953-34554674 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 180

Conread position: 249-524
Cow position: chrX:38549676-38549395 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 16, 219

Conread position: 250-364
Cow position: chrX:15533982-15534101 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 250-374
Cow position: chrX:31279699-31279823 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 107
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 250-429
Cow position: chrX:16555995-16556179 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 126, 69

Conread position: 250-524
Cow position: chrX:918501-918779 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 122, 23

Conread position: 250-524
Cow position: chrX:4109413-4109138 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 202

Conread position: 250-524
Cow position: chrX:9201771-9201498 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 76

Conread position: 251-440
Cow position: chrX:7910846-7911046 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 15

Conread position: 251-511
Cow position: chrX:11938726-11938972 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 141, 69

Conread position: 252-435
Cow position: chrX:41858658-41858850 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 104, 0

Conread position: 252-481
Cow position: chrX:42836407-42836169 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 82, 218

Conread position: 252-523
Cow position: chrX:27508798-27509074 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 149

Conread position: 253-427
Cow position: chrX:13347494-13347313 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 253-448
Cow position: chrX:19761974-19761772 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 64

Conread position: 253-476
Cow position: chrX:4467176-4466957 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 139, 70

Conread position: 253-524
Cow position: chrX:10516479-10516198 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 65, 231

Conread position: 253-524
Cow position: chrX:35224501-35224244 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 92, 63

Conread position: 254-427
Cow position: chrX:11653991-11653811 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 177

Conread position: 254-436
Cow position: chrX:8327129-8326934 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 254-445
Cow position: chrX:35382818-35383015 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 61

Conread position: 254-460
Cow position: chrX:38302038-38301815 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 254-461
Cow position: chrX:1122323-1122538 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 23

Conread position: 254-468
Cow position: chrX:27074827-27075053 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 254-508
Cow position: chrX:22075019-22074758 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 25

Conread position: 254-509
Cow position: chrX:17795203-17794938 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 85, 15

Conread position: 254-522
Cow position: chrX:38642466-38642199 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 37

Conread position: 254-524
Cow position: chrX:21986077-21986344 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 122, 67

Conread position: 254-524
Cow position: chrX:44397235-44396966 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 159

Conread position: 256-445
Cow position: chrX:44991195-44991392 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 256-471
Cow position: chrX:19286679-19286896 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 89, 77

Conread position: 257-524
Cow position: chrX:31436690-31436426 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 63

Conread position: 257-524
Cow position: chrX:35273593-35273303 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 258-448
Cow position: chrX:47079847-47079645 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 19

Conread position: 258-481
Cow position: chrX:20881741-20881953 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 173, 72

Conread position: 258-524
Cow position: chrX:40685109-40685383 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 211

Conread position: 259-468
Cow position: chrX:4645695-4645915 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 85

Conread position: 259-505
Cow position: chrX:20152067-20151817 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 57

Conread position: 261-509
Cow position: chrX:47061603-47061357 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 110, 12

Conread position: 262-373
Cow position: chrX:4366561-4366448 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 262-521
Cow position: chrX:37119791-37119545 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 83, 58

Conread position: 264-447
Cow position: chrX:41809961-41810149 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 112, 58

Conread position: 264-467
Cow position: chrX:30840755-30840538 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 111, 56

Conread position: 264-511
Cow position: chrX:45382847-45383096 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 128, 94

Conread position: 264-518
Cow position: chrX:41192903-41192654 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 111, 42

Conread position: 264-524
Cow position: chrX:10831267-10831545 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 224

Conread position: 264-524
Cow position: chrX:27228343-27228076 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 205

Conread position: 266-472
Cow position: chrX:46069973-46070178 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 126, 54

Conread position: 266-524
Cow position: chrX:8731306-8731035 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 153

Conread position: 268-524
Cow position: chrX:35543094-35542843 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 157

Conread position: 269-524
Cow position: chrX:14275538-14275798 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 62

Conread position: 273-429
Cow position: chrX:19795304-19795466 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 273-468
Cow position: chrX:31294364-31294574 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 274-524
Cow position: chrX:41068924-41068669 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 59

Conread position: 275-524
Cow position: chrX:13647581-13647837 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 45, 184

Conread position: 279-475
Cow position: chrX:24633893-24633675 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 279-523
Cow position: chrX:34222912-34222663 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 192

Conread position: 280-524
Cow position: chrX:169343-169597 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 154

Conread position: 282-453
Cow position: chrX:41862556-41862377 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 287-524
Cow position: chrX:4515879-4515632 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 189

Conread position: 288-524
Cow position: chrX:31252598-31252366 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 145

Conread position: 307-522
Cow position: chrX:33493943-33493727 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 28

Conread position: 310-522
Cow position: chrX:45414142-45414350 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 30

Conread position: 310-524
Cow position: chrX:38006603-38006816 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 40

Conread position: 315-524
Cow position: chrX:42171138-42171348 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 12

Conread position: 316-477
Cow position: chrX:27393867-27394035 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 161

Conread position: 316-499
Cow position: chrX:20743764-20743575 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 157

Conread position: 316-505
Cow position: chrX:43730065-43730255 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 158

Conread position: 316-524
Cow position: chrX:616099-616314 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 18, 166

Conread position: 316-524
Cow position: chrX:618849-619056 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 172
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 18, 70

Conread position: 316-524
Cow position: chrX:17726135-17725922 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 31, 171

Conread position: 316-524
Cow position: chrX:40269653-40269436 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 166

Conread position: 317-505
Cow position: chrX:37129427-37129234 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 155

Conread position: 317-524
Cow position: chrX:878222-878435 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 59, 167

Conread position: 317-524
Cow position: chrX:36068177-36067961 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 168

Conread position: 319-449
Cow position: chrX:34508700-34508561 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 319-468
Cow position: chrX:23562788-23562630 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 319-524
Cow position: chrX:41884256-41884466 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 157

Conread position: 319-524
Cow position: chrX:45175008-45174796 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 171

Conread position: 321-457
Cow position: chrX:24424247-24424392 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 321-477
Cow position: chrX:4615859-4616022 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 7

Conread position: 323-476
Cow position: chrX:42160775-42160617 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 86

Conread position: 323-512
Cow position: chrX:5135368-5135565 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 24

Conread position: 323-524
Cow position: chrX:23092025-23091816 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 145

Conread position: 323-524
Cow position: chrX:31312181-31311977 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 153

Conread position: 323-524
Cow position: chrX:40557524-40557733 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 166

Conread position: 326-511
Cow position: chrX:678426-678611 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 16

Conread position: 327-521
Cow position: chrX:48014583-48014385 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 149

Conread position: 328-465
Cow position: chrX:29501737-29501880 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 117

Conread position: 329-524
Cow position: chrX:45846247-45846047 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 142

Conread position: 331-511
Cow position: chrX:7695892-7695711 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 41, 20

Conread position: 331-521
Cow position: chrX:19943092-19943286 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 68

Conread position: 335-472
Cow position: chrX:25328475-25328621 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 335-524
Cow position: chrX:37986365-37986175 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 41, 60

Conread position: 335-524
Cow position: chrX:46429679-46429872 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 146

Conread position: 340-511
Cow position: chrX:12082189-12082364 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 77

Conread position: 372-503
Cow position: chrX:19273611-19273744 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 372-510
Cow position: chrX:29585215-29585082 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 22, 106

Conread position: 372-510
Cow position: chrX:44095356-44095220 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 89

Conread position: 372-524
Cow position: chrX:7572001-7571851 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 102

Conread position: 372-524
Cow position: chrX:27680494-27680343 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 93

Conread position: 372-524
Cow position: chrX:38066359-38066508 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 97

Conread position: 385-524
Cow position: chrX:13785277-13785415 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 87

Conread position: 397-524
Cow position: chrX:26875811-26875935 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 110
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 79

Show alignments to all cow chromosomes.