Cow genome map
Conread name: | rplun0114_m8.y1 |
Conread position: | 1-275 |
Cow position: | chr1:82573178-82572911 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 32 |
Conread position: | 2-157 |
Cow position: | chr1:42174521-42174360 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 16, 133 |
Conread position: | 2-157 |
Cow position: | chr1:72181872-72182029 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 16, 59 |
Conread position: | 2-193 |
Cow position: | chr1:22070325-22070520 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 156 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 11, 58 |
Conread position: | 2-197 |
Cow position: | chr1:81371625-81371425 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 161 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 2-245 |
Cow position: | chr1:102556657-102556902 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 180 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 21, 150 |
Conread position: | 2-270 |
Cow position: | chr1:49727939-49728205 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 89 |
Conread position: | 2-270 |
Cow position: | chr1:92551078-92550812 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 60 |
Conread position: | 2-276 |
Cow position: | chr1:18223801-18223534 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 209 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 16, 56 |
Conread position: | 3-193 |
Cow position: | chr1:23624231-23624423 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 149 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 19, 30 |
Conread position: | 4-217 |
Cow position: | chr1:19439953-19439737 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 172 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 15, 28 |
Conread position: | 8-269 |
Cow position: | chr1:63133703-63133965 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 198 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 34, 94 |
Conread position: | 9-282 |
Cow position: | chr1:39244500-39244221 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 11-189 |
Cow position: | chr1:22516625-22516803 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 134 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 31, 154 |
Conread position: | 11-262 |
Cow position: | chr1:87914881-87914625 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 199 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 21, 33 |
Conread position: | 11-266 |
Cow position: | chr1:40420375-40420129 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 197 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 31, 64 |
Conread position: | 11-267 |
Cow position: | chr1:69061318-69061563 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 193 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 34, 56 |
Conread position: | 11-270 |
Cow position: | chr1:11879087-11878835 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 199 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 31, 18 |
Conread position: | 11-270 |
Cow position: | chr1:64479894-64479642 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 186 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 24, 193 |
Conread position: | 11-270 |
Cow position: | chr1:76780375-76780095 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 206 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 30, 220 |
Conread position: | 11-271 |
Cow position: | chr1:64099197-64098949 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 196 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 31, 52 |
Conread position: | 11-275 |
Cow position: | chr1:85409789-85409536 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 199 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 7, 40 |
Conread position: | 11-276 |
Cow position: | chr1:11831359-11831615 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 201 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 12-275 |
Cow position: | chr1:22495626-22495897 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 196 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 30, 78 |
Conread position: | 12-279 |
Cow position: | chr1:40222956-40222693 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 194 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 5, 71 |
Conread position: | 15-167 |
Cow position: | chr1:40161301-40161455 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 26, 92 |
Conread position: | 15-259 |
Cow position: | chr1:40164327-40164555 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 183 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 26, 92 |
Conread position: | 15-264 |
Cow position: | chr1:52206764-52207011 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 105 |
Conread position: | 15-266 |
Cow position: | chr1:74713542-74713787 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 193 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 26, 78 |
Conread position: | 20-269 |
Cow position: | chr1:45977993-45978244 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 190 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 22, 155 |
Conread position: | 24-270 |
Cow position: | chr1:77755867-77755626 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 36 |
Conread position: | 32-266 |
Cow position: | chr1:27545913-27546141 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 164 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 11, 24 |
Conread position: | 47-275 |
Cow position: | chr1:37432475-37432710 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 166 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 91, 31 |
Conread position: | 48-270 |
Cow position: | chr1:30041845-30042059 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 172 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 60-278 |
Cow position: | chr1:71555673-71555474 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 167 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 61-270 |
Cow position: | chr1:31233222-31233008 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 160 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 92, 144 |
Conread position: | 62-275 |
Cow position: | chr1:85351-85564 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 161 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 83, 56 |
Conread position: | 96-267 |
Cow position: | chr1:2296518-2296686 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 97-270 |
Cow position: | chr1:34310993-34311163 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 137 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 102, 23 |
Conread position: | 141-276 |
Cow position: | chr1:79915414-79915551 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 16, 84 |
Conread position: | 150-275 |
Cow position: | chr1:80329832-80329708 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.