Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 1-275 |
| Cow position: | chr10:31220033-31220333 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 17, 276 |
| Conread position: | 2-235 |
| Cow position: | chr10:16669329-16669090 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 2-278 |
| Cow position: | chr10:22455230-22455501 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 147 |
| Conread position: | 3-241 |
| Cow position: | chr10:45650709-45650934 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 4-270 |
| Cow position: | chr10:43061073-43060790 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 42, 75 |
| Conread position: | 4-276 |
| Cow position: | chr10:22860118-22859838 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 17, 246 |
| Conread position: | 8-193 |
| Cow position: | chr10:41637694-41637879 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 144 |
| Conread position: | 8-270 |
| Cow position: | chr10:11275697-11275971 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 33, 53 |
| Conread position: | 9-145 |
| Cow position: | chr10:48313023-48312888 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 9-270 |
| Cow position: | chr10:68204049-68203785 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 11-201 |
| Cow position: | chr10:12875761-12875576 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 11-218 |
| Cow position: | chr10:15618722-15618506 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 11-251 |
| Cow position: | chr10:4994515-4994261 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 11-259 |
| Cow position: | chr10:3317911-3318168 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 26, 166 |
| Conread position: | 11-270 |
| Cow position: | chr10:1351982-1352249 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 15-270 |
| Cow position: | chr10:28566194-28565932 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 198 |
| Conread position: | 20-258 |
| Cow position: | chr10:38472255-38472505 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 22, 201 |
| Conread position: | 40-257 |
| Cow position: | chr10:68979623-68979833 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 43-275 |
| Cow position: | chr10:48208707-48208479 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 43, 106 |
| Conread position: | 60-286 |
| Cow position: | chr10:60243062-60243288 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 88, 218 |
| Conread position: | 61-258 |
| Cow position: | chr10:37428584-37428385 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 143, 87 |
| Conread position: | 62-266 |
| Cow position: | chr10:23880058-23879859 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 65 |
| Conread position: | 65-266 |
| Cow position: | chr10:12199109-12199310 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 130, 104 |
| Conread position: | 66-266 |
| Cow position: | chr10:767677-767484 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 79-275 |
| Cow position: | chr10:27222884-27223079 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 98-266 |
| Cow position: | chr10:53375142-53374974 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-278 |
| Cow position: | chr10:60688164-60688033 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.