Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 2-153 |
| Cow position: | chr13:42254928-42255073 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-234 |
| Cow position: | chr13:38362207-38361972 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 11, 60 |
| Conread position: | 4-268 |
| Cow position: | chr13:45497328-45497603 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 4-269 |
| Cow position: | chr13:34265020-34264753 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 4-275 |
| Cow position: | chr13:46464741-46464477 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 8-258 |
| Cow position: | chr13:37497813-37498058 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 55 |
| Conread position: | 9-153 |
| Cow position: | chr13:1367930-1367782 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 9-267 |
| Cow position: | chr13:39487411-39487658 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 11-148 |
| Cow position: | chr13:43384717-43384856 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 11-158 |
| Cow position: | chr13:46349589-46349738 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 11-269 |
| Cow position: | chr13:34885050-34885311 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 81 |
| Conread position: | 11-270 |
| Cow position: | chr13:19115507-19115749 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 11-273 |
| Cow position: | chr13:38535298-38535051 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 13-258 |
| Cow position: | chr13:12325193-12325432 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 5, 112 |
| Conread position: | 15-259 |
| Cow position: | chr13:55406751-55406995 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 17-270 |
| Cow position: | chr13:34336353-34336600 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 38-258 |
| Cow position: | chr13:11441463-11441676 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 174, 109 |
| Conread position: | 39-266 |
| Cow position: | chr13:30951571-30951353 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 157, 17 |
| Conread position: | 44-259 |
| Cow position: | chr13:46373350-46373144 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 30, 75 |
| Conread position: | 50-270 |
| Cow position: | chr13:51240851-51241060 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 56-269 |
| Cow position: | chr13:47325775-47325556 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 58-266 |
| Cow position: | chr13:62271996-62271792 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 58-268 |
| Cow position: | chr13:59997899-59997688 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 112 |
| Conread position: | 58-275 |
| Cow position: | chr13:9103773-9103567 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 94 |
| Conread position: | 66-252 |
| Cow position: | chr13:4794004-4794194 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 68-269 |
| Cow position: | chr13:25955478-25955291 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 69-181 |
| Cow position: | chr13:25699422-25699528 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 70-270 |
| Cow position: | chr13:30833978-30834163 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 75-276 |
| Cow position: | chr13:17169346-17169539 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 100-259 |
| Cow position: | chr13:15489590-15489754 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 100-265 |
| Cow position: | chr13:44144242-44144073 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 59, 143 |
| Conread position: | 118-256 |
| Cow position: | chr13:21878498-21878357 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 98 |
| Conread position: | 120-278 |
| Cow position: | chr13:18839113-18839271 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 77, 116 |
Show alignments to all cow chromosomes.