Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 2-151 |
| Cow position: | chr14:12643776-12643929 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-275 |
| Cow position: | chr14:28007591-28007317 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 2-279 |
| Cow position: | chr14:3436970-3436699 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 11, 122 |
| Conread position: | 4-278 |
| Cow position: | chr14:30020881-30021147 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 15 |
| Conread position: | 8-212 |
| Cow position: | chr14:45018527-45018735 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 8-270 |
| Cow position: | chr14:41712989-41712729 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 33, 123 |
| Conread position: | 9-275 |
| Cow position: | chr14:37983434-37983697 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 9-278 |
| Cow position: | chr14:2298945-2299211 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 32, 187 |
| Conread position: | 11-258 |
| Cow position: | chr14:45185316-45185065 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 164 |
| Conread position: | 11-264 |
| Cow position: | chr14:40244140-40243891 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 11-269 |
| Cow position: | chr14:3588472-3588736 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 11-269 |
| Cow position: | chr14:44454424-44454159 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 31, 47 |
| Conread position: | 11-270 |
| Cow position: | chr14:44886518-44886267 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 140 |
| Conread position: | 11-278 |
| Cow position: | chr14:35605343-35605609 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 52 |
| Conread position: | 11-278 |
| Cow position: | chr14:38000490-38000237 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 31, 98 |
| Conread position: | 12-275 |
| Cow position: | chr14:24783188-24783448 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 13-287 |
| Cow position: | chr14:27578824-27579083 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 15-200 |
| Cow position: | chr14:46546021-46546209 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 127 |
| Conread position: | 15-241 |
| Cow position: | chr14:47043903-47044140 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 16-228 |
| Cow position: | chr14:47880166-47880374 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 19-270 |
| Cow position: | chr14:15011504-15011760 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 194 |
| Conread position: | 22-258 |
| Cow position: | chr14:14835180-14835414 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 23-275 |
| Cow position: | chr14:42693604-42693355 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 127 |
| Conread position: | 36-275 |
| Cow position: | chr14:42258890-42258669 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 48-270 |
| Cow position: | chr14:31810572-31810355 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 52-275 |
| Cow position: | chr14:35682932-35683151 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 149, 25 |
| Conread position: | 56-257 |
| Cow position: | chr14:24193260-24193050 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 95, 54 |
| Conread position: | 57-272 |
| Cow position: | chr14:19339757-19339973 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 58-273 |
| Cow position: | chr14:36419659-36419877 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 60-272 |
| Cow position: | chr14:50650454-50650250 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 87, 62 |
| Conread position: | 106-258 |
| Cow position: | chr14:24739129-24738970 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 136-275 |
| Cow position: | chr14:46980164-46980304 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 76 |
| Conread position: | 142-266 |
| Cow position: | chr14:14245471-14245347 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 143-268 |
| Cow position: | chr14:15662205-15662329 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.