Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 2-156 |
| Cow position: | chr15:14811464-14811314 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 2-212 |
| Cow position: | chr15:31935267-31935469 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 2-269 |
| Cow position: | chr15:52868560-52868818 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 120 |
| Conread position: | 2-270 |
| Cow position: | chr15:10581129-10581409 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 4-268 |
| Cow position: | chr15:18403667-18403929 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 14, 126 |
| Conread position: | 6-275 |
| Cow position: | chr15:53728539-53728275 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 8-181 |
| Cow position: | chr15:4623500-4623322 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 138, 63 |
| Conread position: | 8-260 |
| Cow position: | chr15:6523697-6523447 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 8-263 |
| Cow position: | chr15:37633091-37633359 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 9-234 |
| Cow position: | chr15:40065674-40065907 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 32, 48 |
| Conread position: | 9-270 |
| Cow position: | chr15:53712576-53712833 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 32, 141 |
| Conread position: | 9-271 |
| Cow position: | chr15:44797546-44797270 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 10-258 |
| Cow position: | chr15:17641944-17642195 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 31, 113 |
| Conread position: | 11-112 |
| Cow position: | chr15:5912686-5912583 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 11-148 |
| Cow position: | chr15:14974443-14974305 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 11-267 |
| Cow position: | chr15:23265524-23265783 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 141 |
| Conread position: | 11-270 |
| Cow position: | chr15:9072429-9072694 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 19, 198 |
| Conread position: | 11-270 |
| Cow position: | chr15:31918228-31917986 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 11-272 |
| Cow position: | chr15:11997476-11997749 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 11-275 |
| Cow position: | chr15:37470224-37469967 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 11-279 |
| Cow position: | chr15:25683430-25683702 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 12-176 |
| Cow position: | chr15:35041825-35041991 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 13-273 |
| Cow position: | chr15:27972033-27971771 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 37-247 |
| Cow position: | chr15:4721304-4721503 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 48-174 |
| Cow position: | chr15:30569935-30570061 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 58-262 |
| Cow position: | chr15:50243104-50243304 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 56 |
| Conread position: | 100-254 |
| Cow position: | chr15:1992622-1992772 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 112-270 |
| Cow position: | chr15:578889-579053 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 115-267 |
| Cow position: | chr15:12048898-12048744 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 92 |
| Conread position: | 119-275 |
| Cow position: | chr15:11287615-11287470 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 140-266 |
| Cow position: | chr15:5912583-5912457 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 151-274 |
| Cow position: | chr15:14974233-14974109 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 161-276 |
| Cow position: | chr15:1887963-1888078 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 45 |
Show alignments to all cow chromosomes.