Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 2-192 |
| Cow position: | chr16:45551898-45552080 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 120 |
| Conread position: | 2-238 |
| Cow position: | chr16:15734633-15734869 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 11, 152 |
| Conread position: | 2-250 |
| Cow position: | chr16:341327-341564 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-270 |
| Cow position: | chr16:13043882-13044172 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-270 |
| Cow position: | chr16:14799677-14799412 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 3-275 |
| Cow position: | chr16:47781360-47781625 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 15, 219 |
| Conread position: | 9-232 |
| Cow position: | chr16:52814103-52813896 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 9-253 |
| Cow position: | chr16:17867410-17867171 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 9-270 |
| Cow position: | chr16:23035226-23034970 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 9-282 |
| Cow position: | chr16:41680696-41680425 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 10-275 |
| Cow position: | chr16:19152777-19153043 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 11-186 |
| Cow position: | chr16:2375940-2375759 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 11-199 |
| Cow position: | chr16:11161487-11161671 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 11-251 |
| Cow position: | chr16:56374185-56373937 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 30, 201 |
| Conread position: | 11-257 |
| Cow position: | chr16:53547515-53547275 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 11-259 |
| Cow position: | chr16:4856413-4856167 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 114, 18 |
| Conread position: | 11-266 |
| Cow position: | chr16:31375102-31374847 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 11-270 |
| Cow position: | chr16:4295451-4295191 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 194 |
| Conread position: | 11-270 |
| Cow position: | chr16:16118530-16118782 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 11-270 |
| Cow position: | chr16:43850755-43850506 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 11-271 |
| Cow position: | chr16:36910970-36910705 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 158 |
| Conread position: | 11-272 |
| Cow position: | chr16:15509003-15509263 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 140 |
| Conread position: | 11-275 |
| Cow position: | chr16:14443985-14444241 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 30, 137 |
| Conread position: | 12-270 |
| Cow position: | chr16:22785968-22785708 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 13-157 |
| Cow position: | chr16:23747526-23747380 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 17-266 |
| Cow position: | chr16:29204960-29204724 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 79 |
| Conread position: | 29-265 |
| Cow position: | chr16:2732044-2731820 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 40-252 |
| Cow position: | chr16:37442024-37441818 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 42-276 |
| Cow position: | chr16:47391148-47391369 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 16, 76 |
| Conread position: | 51-267 |
| Cow position: | chr16:5131640-5131427 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 62-278 |
| Cow position: | chr16:30572499-30572295 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 72-275 |
| Cow position: | chr16:42405995-42406191 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 91, 17 |
| Conread position: | 97-275 |
| Cow position: | chr16:6031480-6031309 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 113-269 |
| Cow position: | chr16:32352005-32352168 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 130-275 |
| Cow position: | chr16:48894629-48894491 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 145-279 |
| Cow position: | chr16:12473523-12473657 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.