Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 2-141 |
| Cow position: | chr2:69982480-69982619 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 2-258 |
| Cow position: | chr2:53716920-53716659 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 207 |
| Conread position: | 2-270 |
| Cow position: | chr2:33791418-33791148 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 127 |
| Conread position: | 2-270 |
| Cow position: | chr2:64073611-64073888 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 3-238 |
| Cow position: | chr2:27145305-27145055 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 4-165 |
| Cow position: | chr2:50379677-50379837 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 4-275 |
| Cow position: | chr2:62674175-62673911 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 14, 132 |
| Conread position: | 5-274 |
| Cow position: | chr2:74388054-74387790 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 154, 37 |
| Conread position: | 8-155 |
| Cow position: | chr2:31420078-31420223 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 51 |
| Conread position: | 8-266 |
| Cow position: | chr2:71121098-71121355 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 9-153 |
| Cow position: | chr2:6292703-6292849 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 9-258 |
| Cow position: | chr2:32393486-32393727 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 180, 34 |
| Conread position: | 9-276 |
| Cow position: | chr2:7211866-7212132 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 169 |
| Conread position: | 9-276 |
| Cow position: | chr2:77968429-77968174 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 11-270 |
| Cow position: | chr2:41490721-41490965 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 11-275 |
| Cow position: | chr2:43345217-43344956 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 139 |
| Conread position: | 11-286 |
| Cow position: | chr2:21697658-21697373 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 12-258 |
| Cow position: | chr2:76055482-76055237 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 171 |
| Conread position: | 12-268 |
| Cow position: | chr2:18249808-18249553 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 16-270 |
| Cow position: | chr2:72598886-72599149 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 30, 207 |
| Conread position: | 16-275 |
| Cow position: | chr2:31490318-31490568 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 17-275 |
| Cow position: | chr2:3296265-3296526 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 24, 145 |
| Conread position: | 32-143 |
| Cow position: | chr2:13048283-13048397 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 39-275 |
| Cow position: | chr2:7779391-7779144 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 53 |
| Conread position: | 48-266 |
| Cow position: | chr2:47746338-47746558 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 111, 72 |
| Conread position: | 58-267 |
| Cow position: | chr2:42286393-42286170 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 92, 161 |
| Conread position: | 59-258 |
| Cow position: | chr2:82828249-82828045 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 93, 18 |
| Conread position: | 61-268 |
| Cow position: | chr2:39196651-39196437 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 94, 152 |
| Conread position: | 64-276 |
| Cow position: | chr2:6820256-6820056 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 50 |
| Conread position: | 67-259 |
| Cow position: | chr2:14037579-14037390 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 96-272 |
| Cow position: | chr2:24884152-24884329 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 97-275 |
| Cow position: | chr2:37003459-37003632 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 130, 51 |
| Conread position: | 134-268 |
| Cow position: | chr2:13048413-13048547 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-275 |
| Cow position: | chr2:9043403-9043535 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.