Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 2-193 |
| Cow position: | chr24:26846223-26846025 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 150 |
| Conread position: | 3-270 |
| Cow position: | chr24:6424015-6423754 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 4-275 |
| Cow position: | chr24:14913522-14913261 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 4-275 |
| Cow position: | chr24:43492464-43492202 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 8-259 |
| Cow position: | chr24:37386304-37386052 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 53 |
| Conread position: | 9-268 |
| Cow position: | chr24:19627378-19627636 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 192 |
| Conread position: | 11-158 |
| Cow position: | chr24:6665392-6665243 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 11-221 |
| Cow position: | chr24:36853373-36853591 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 11-242 |
| Cow position: | chr24:6177446-6177681 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 31, 115 |
| Conread position: | 11-258 |
| Cow position: | chr24:19961465-19961211 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 11-258 |
| Cow position: | chr24:43351047-43350798 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 199 |
| Conread position: | 11-266 |
| Cow position: | chr24:25246087-25246345 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 11-266 |
| Cow position: | chr24:25343112-25343366 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 11-275 |
| Cow position: | chr24:42817310-42817574 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 146 |
| Conread position: | 11-276 |
| Cow position: | chr24:38643663-38643936 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 163 |
| Conread position: | 11-278 |
| Cow position: | chr24:7038813-7039075 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 12-278 |
| Cow position: | chr24:17763212-17762952 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 23-270 |
| Cow position: | chr24:31301597-31301364 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 18, 180 |
| Conread position: | 29-258 |
| Cow position: | chr24:41405248-41405029 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 58-287 |
| Cow position: | chr24:25934504-25934726 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 63-270 |
| Cow position: | chr24:9867372-9867163 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 95, 80 |
| Conread position: | 65-275 |
| Cow position: | chr24:36551250-36551046 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 95, 54 |
| Conread position: | 68-259 |
| Cow position: | chr24:1296948-1296758 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 115, 107 |
| Conread position: | 68-270 |
| Cow position: | chr24:35835909-35835713 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 130, 48 |
| Conread position: | 72-275 |
| Cow position: | chr24:32579293-32579494 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 94, 9 |
| Conread position: | 97-269 |
| Cow position: | chr24:15474831-15474995 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 100-275 |
| Cow position: | chr24:17417219-17417403 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 106-262 |
| Cow position: | chr24:29515981-29515817 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 99 |
Show alignments to all cow chromosomes.