Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 2-182 |
| Cow position: | chr29:17339246-17339061 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 79 |
| Conread position: | 2-276 |
| Cow position: | chr29:21198589-21198303 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-268 |
| Cow position: | chr29:35036796-35037064 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 8-170 |
| Cow position: | chr29:30921620-30921454 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 9-269 |
| Cow position: | chr29:22454756-22454497 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 9-271 |
| Cow position: | chr29:16359691-16359957 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 146 |
| Conread position: | 9-278 |
| Cow position: | chr29:8906601-8906872 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 33, 98 |
| Conread position: | 11-266 |
| Cow position: | chr29:18338470-18338207 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 11-275 |
| Cow position: | chr29:37207836-37208100 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 14-264 |
| Cow position: | chr29:13040464-13040209 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 15-265 |
| Cow position: | chr29:2481263-2481019 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 22-266 |
| Cow position: | chr29:7738613-7738365 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 68 |
| Conread position: | 31-275 |
| Cow position: | chr29:8685108-8685368 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 5, 17 |
| Conread position: | 39-270 |
| Cow position: | chr29:30813543-30813773 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 60-267 |
| Cow position: | chr29:4458716-4458921 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 110, 17 |
| Conread position: | 66-231 |
| Cow position: | chr29:19931459-19931633 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 93-274 |
| Cow position: | chr29:3346121-3346303 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 108 |
| Conread position: | 144-266 |
| Cow position: | chr29:8891053-8890928 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
Show alignments to all cow chromosomes.