Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 2-247 |
| Cow position: | chr4:49741593-49741864 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 231 |
| Conread position: | 2-258 |
| Cow position: | chr4:9822201-9822457 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 2-269 |
| Cow position: | chr4:59565586-59565861 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 213 |
| Conread position: | 2-270 |
| Cow position: | chr4:29067591-29067320 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 112 |
| Conread position: | 2-270 |
| Cow position: | chr4:31586773-31586501 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-275 |
| Cow position: | chr4:47511075-47511349 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 20, 152 |
| Conread position: | 3-139 |
| Cow position: | chr4:53763070-53762931 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-275 |
| Cow position: | chr4:39646724-39647001 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 4-276 |
| Cow position: | chr4:6793424-6793700 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 144, 7 |
| Conread position: | 9-255 |
| Cow position: | chr4:17176213-17176455 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 138 |
| Conread position: | 9-258 |
| Cow position: | chr4:53641385-53641632 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 141 |
| Conread position: | 10-175 |
| Cow position: | chr4:68107436-68107277 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 11-120 |
| Cow position: | chr4:49884934-49884823 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 11-172 |
| Cow position: | chr4:20925916-20925760 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 11-194 |
| Cow position: | chr4:57652306-57652485 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 30, 139 |
| Conread position: | 11-259 |
| Cow position: | chr4:14564850-14564587 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 159, 37 |
| Conread position: | 11-268 |
| Cow position: | chr4:58833152-58832897 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 11-270 |
| Cow position: | chr4:5188946-5188689 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 11-270 |
| Cow position: | chr4:8597626-8597366 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 140 |
| Conread position: | 11-270 |
| Cow position: | chr4:41975650-41975400 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 139 |
| Conread position: | 11-275 |
| Cow position: | chr4:29222457-29222192 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 139 |
| Conread position: | 11-277 |
| Cow position: | chr4:34043562-34043294 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 12-275 |
| Cow position: | chr4:4300596-4300862 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 15-151 |
| Cow position: | chr4:6630222-6630088 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 26, 67 |
| Conread position: | 18-270 |
| Cow position: | chr4:27443904-27444161 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 186 |
| Conread position: | 29-267 |
| Cow position: | chr4:9127783-9128018 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 119 |
| Conread position: | 32-267 |
| Cow position: | chr4:60159626-60159387 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 38-269 |
| Cow position: | chr4:51905258-51905481 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 128, 154 |
| Conread position: | 39-275 |
| Cow position: | chr4:57222131-57221895 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 165, 110 |
| Conread position: | 43-270 |
| Cow position: | chr4:46875425-46875185 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 111, 130 |
| Conread position: | 58-270 |
| Cow position: | chr4:32749326-32749546 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 89-268 |
| Cow position: | chr4:58432823-58432646 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 97-243 |
| Cow position: | chr4:49884624-49884480 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 108, 52 |
| Conread position: | 97-270 |
| Cow position: | chr4:2238090-2237917 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 103 |
| Conread position: | 98-272 |
| Cow position: | chr4:60662553-60662730 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 95 |
| Conread position: | 101-275 |
| Cow position: | chr4:21162792-21162969 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 54, 108 |
Show alignments to all cow chromosomes.