Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 1-252 |
| Cow position: | chr6:29077835-29078086 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 1-266 |
| Cow position: | chr6:23891657-23891916 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 15, 153 |
| Conread position: | 1-270 |
| Cow position: | chr6:23932863-23932612 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 2-139 |
| Cow position: | chr6:32428337-32428476 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 126 |
| Conread position: | 2-213 |
| Cow position: | chr6:12519599-12519808 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 44, 148 |
| Conread position: | 4-266 |
| Cow position: | chr6:11159900-11159633 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 4-267 |
| Cow position: | chr6:39917272-39917537 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 147, 11 |
| Conread position: | 7-133 |
| Cow position: | chr6:20172370-20172495 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 8-267 |
| Cow position: | chr6:45617322-45617065 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 60 |
| Conread position: | 10-266 |
| Cow position: | chr6:6635256-6635508 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 11-142 |
| Cow position: | chr6:20332370-20332240 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 11-270 |
| Cow position: | chr6:41557582-41557847 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 11-276 |
| Cow position: | chr6:3017564-3017840 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 149, 34 |
| Conread position: | 11-276 |
| Cow position: | chr6:31688071-31687818 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 11-278 |
| Cow position: | chr6:19459154-19459424 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 11-287 |
| Cow position: | chr6:40240650-40240907 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 269, 18 |
| Conread position: | 15-270 |
| Cow position: | chr6:41157347-41157594 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 15-272 |
| Cow position: | chr6:44377388-44377636 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 152, 28 |
| Conread position: | 17-266 |
| Cow position: | chr6:6244787-6244554 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 24, 121 |
| Conread position: | 17-266 |
| Cow position: | chr6:45692539-45692299 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 19-157 |
| Cow position: | chr6:51071830-51071969 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 133 |
| Conread position: | 19-275 |
| Cow position: | chr6:4666673-4666417 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 23, 107 |
| Conread position: | 22-163 |
| Cow position: | chr6:58593991-58593849 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 131 |
| Conread position: | 39-218 |
| Cow position: | chr6:66388201-66388015 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 39-270 |
| Cow position: | chr6:5678901-5678682 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 47-270 |
| Cow position: | chr6:69274637-69274412 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 108, 154 |
| Conread position: | 60-275 |
| Cow position: | chr6:29082896-29082696 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 61-258 |
| Cow position: | chr6:62754327-62754134 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 65-273 |
| Cow position: | chr6:39293059-39293261 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 72-270 |
| Cow position: | chr6:3374271-3374059 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 107-275 |
| Cow position: | chr6:40299210-40299044 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 136-266 |
| Cow position: | chr6:32428680-32428807 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 137-248 |
| Cow position: | chr6:1940230-1940119 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 147-277 |
| Cow position: | chr6:29299802-29299930 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.