Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 1-146 |
| Cow position: | chr7:23446821-23446674 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-157 |
| Cow position: | chr7:52130611-52130772 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1-286 |
| Cow position: | chr7:11593105-11592836 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 50 |
| Conread position: | 2-270 |
| Cow position: | chr7:42222334-42222054 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 232 |
| Conread position: | 4-208 |
| Cow position: | chr7:43004490-43004694 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 166 |
| Conread position: | 4-275 |
| Cow position: | chr7:1398176-1397909 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 4-275 |
| Cow position: | chr7:65953296-65953031 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 114 |
| Conread position: | 9-143 |
| Cow position: | chr7:43257474-43257609 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 92 |
| Conread position: | 9-217 |
| Cow position: | chr7:20289151-20288932 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 9-267 |
| Cow position: | chr7:13822895-13823155 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 9-275 |
| Cow position: | chr7:62516122-62516384 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 11-148 |
| Cow position: | chr7:61754707-61754841 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 11-153 |
| Cow position: | chr7:11187334-11187477 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 11-155 |
| Cow position: | chr7:35754575-35754719 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 140 |
| Conread position: | 11-244 |
| Cow position: | chr7:63328192-63328432 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 30, 89 |
| Conread position: | 11-252 |
| Cow position: | chr7:2967245-2967490 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 11-256 |
| Cow position: | chr7:61425666-61425916 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 31, 114 |
| Conread position: | 11-266 |
| Cow position: | chr7:48335356-48335120 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 31, 136 |
| Conread position: | 11-269 |
| Cow position: | chr7:39512482-39512234 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 15-275 |
| Cow position: | chr7:20104901-20104641 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 15-275 |
| Cow position: | chr7:27709543-27709275 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 20-286 |
| Cow position: | chr7:29378029-29377766 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 187 |
| Conread position: | 27-259 |
| Cow position: | chr7:67498826-67499053 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 32-193 |
| Cow position: | chr7:27763111-27763279 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 9, 145 |
| Conread position: | 39-279 |
| Cow position: | chr7:62048538-62048789 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 105, 167 |
| Conread position: | 45-270 |
| Cow position: | chr7:64366707-64366922 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 58-247 |
| Cow position: | chr7:34798414-34798597 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 58-265 |
| Cow position: | chr7:68367388-68367177 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 65-269 |
| Cow position: | chr7:56664236-56664430 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 88, 115 |
| Conread position: | 65-276 |
| Cow position: | chr7:5701087-5701293 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 72-260 |
| Cow position: | chr7:28560872-28560693 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 80-276 |
| Cow position: | chr7:45064238-45064043 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 110-286 |
| Cow position: | chr7:11187754-11187927 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 150-270 |
| Cow position: | chr7:59164149-59164265 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.