Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 1-266 |
| Cow position: | chr8:23441064-23440771 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 229 |
| Conread position: | 2-270 |
| Cow position: | chr8:19369417-19369155 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 2-275 |
| Cow position: | chr8:33437862-33438129 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 122 |
| Conread position: | 8-211 |
| Cow position: | chr8:19772577-19772775 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 8-276 |
| Cow position: | chr8:11792278-11792559 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 208 |
| Conread position: | 9-157 |
| Cow position: | chr8:49384651-49384799 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 138, 34 |
| Conread position: | 9-177 |
| Cow position: | chr8:59137820-59137652 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 32, 129 |
| Conread position: | 9-256 |
| Cow position: | chr8:27369168-27369411 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 32, 124 |
| Conread position: | 9-270 |
| Cow position: | chr8:2974731-2974990 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 11-109 |
| Cow position: | chr8:12790761-12790663 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-194 |
| Cow position: | chr8:8480859-8480678 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 11-237 |
| Cow position: | chr8:31886825-31887037 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 186, 30 |
| Conread position: | 11-259 |
| Cow position: | chr8:54158815-54159067 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 30, 161 |
| Conread position: | 11-275 |
| Cow position: | chr8:40432783-40432527 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 27, 87 |
| Conread position: | 12-275 |
| Cow position: | chr8:48682411-48682156 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 14-286 |
| Cow position: | chr8:21078615-21078886 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 136 |
| Conread position: | 15-237 |
| Cow position: | chr8:21119188-21118958 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 17-165 |
| Cow position: | chr8:6409345-6409197 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 131 |
| Conread position: | 22-270 |
| Cow position: | chr8:7104322-7104074 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 81 |
| Conread position: | 42-269 |
| Cow position: | chr8:4336956-4336726 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 164 |
| Conread position: | 43-270 |
| Cow position: | chr8:18725329-18725551 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 44-277 |
| Cow position: | chr8:5874269-5874490 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 228, 104 |
| Conread position: | 59-270 |
| Cow position: | chr8:45686313-45686114 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 60-269 |
| Cow position: | chr8:30021793-30021589 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 60-282 |
| Cow position: | chr8:952164-952374 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 104 |
| Conread position: | 66-283 |
| Cow position: | chr8:40273504-40273294 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 67-275 |
| Cow position: | chr8:20341571-20341370 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 133, 31 |
| Conread position: | 130-266 |
| Cow position: | chr8:54828437-54828573 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-275 |
| Cow position: | chr8:9985943-9986071 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 150-275 |
| Cow position: | chr8:12790664-12790542 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 108, 19 |
Show alignments to all cow chromosomes.