Cow genome map
| Conread name: | rplun0114_m8.y1 |
| Conread position: | 1-270 |
| Cow position: | chr9:6109859-6109591 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 176 |
| Conread position: | 2-270 |
| Cow position: | chr9:41318005-41318283 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 2-276 |
| Cow position: | chr9:18570417-18570693 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 154 |
| Conread position: | 3-153 |
| Cow position: | chr9:55651004-55650847 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 3-196 |
| Cow position: | chr9:10761378-10761569 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 128 |
| Conread position: | 4-259 |
| Cow position: | chr9:5622057-5622317 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 7-258 |
| Cow position: | chr9:14732293-14732026 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 31, 208 |
| Conread position: | 7-275 |
| Cow position: | chr9:9077145-9077412 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 8-258 |
| Cow position: | chr9:4834947-4834688 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 8-275 |
| Cow position: | chr9:34762893-34763158 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 34, 110 |
| Conread position: | 9-192 |
| Cow position: | chr9:59114337-59114146 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 11-157 |
| Cow position: | chr9:51269824-51269676 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 11-202 |
| Cow position: | chr9:25502576-25502763 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 11-270 |
| Cow position: | chr9:55364849-55364586 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 30 |
| Conread position: | 11-275 |
| Cow position: | chr9:1281144-1281414 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 29, 111 |
| Conread position: | 12-272 |
| Cow position: | chr9:15685493-15685750 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 136, 19 |
| Conread position: | 13-228 |
| Cow position: | chr9:12181924-12181707 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 25 |
| Conread position: | 15-270 |
| Cow position: | chr9:12198944-12199207 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 87 |
| Conread position: | 21-275 |
| Cow position: | chr9:44944159-44944407 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 101 |
| Conread position: | 21-276 |
| Cow position: | chr9:52725406-52725663 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 20 |
| Conread position: | 32-270 |
| Cow position: | chr9:7670552-7670315 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-286 |
| Cow position: | chr9:39993677-39993929 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 118 |
| Conread position: | 58-269 |
| Cow position: | chr9:34188873-34188680 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 59-276 |
| Cow position: | chr9:53596899-53597111 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 68-270 |
| Cow position: | chr9:2638418-2638625 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 141 |
| Conread position: | 97-269 |
| Cow position: | chr9:35527585-35527408 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 100, 24 |
| Conread position: | 122-270 |
| Cow position: | chr9:4985515-4985666 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 38, 51 |
| Conread position: | 147-269 |
| Cow position: | chr9:4915012-4915132 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 151-270 |
| Cow position: | chr9:39001580-39001464 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.