Cow genome map
Conread name: | rplun0114_m8.y1 |
Conread position: | 2-148 |
Cow position: | chrX:12826839-12826993 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 2-196 |
Cow position: | chrX:4631583-4631382 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 157 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 15, 117 |
Conread position: | 2-274 |
Cow position: | chrX:10311836-10312098 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 199 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 11, 43 |
Conread position: | 2-286 |
Cow position: | chrX:21816357-21816639 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 68 |
Conread position: | 3-270 |
Cow position: | chrX:25453273-25453537 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 38 |
Conread position: | 4-267 |
Cow position: | chrX:16816764-16817026 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 119 |
Conread position: | 4-275 |
Cow position: | chrX:2147435-2147678 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 213 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 38, 94 |
Conread position: | 5-269 |
Cow position: | chrX:43647671-43647401 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 195 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 17, 91 |
Conread position: | 7-278 |
Cow position: | chrX:21886011-21885744 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 205 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 237, 30 |
Conread position: | 11-258 |
Cow position: | chrX:2186362-2186603 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 111 |
Conread position: | 11-259 |
Cow position: | chrX:23254103-23253844 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 192 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 19, 58 |
Conread position: | 11-268 |
Cow position: | chrX:18814274-18814521 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 73 |
Conread position: | 11-270 |
Cow position: | chrX:19018157-19017888 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 62 |
Conread position: | 11-275 |
Cow position: | chrX:956583-956839 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 112 |
Conread position: | 11-275 |
Cow position: | chrX:8558362-8558098 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 193 |
Conread position: | 11-275 |
Cow position: | chrX:24201284-24201534 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 192 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 12-265 |
Cow position: | chrX:3405043-3404790 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 192 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 29, 47 |
Conread position: | 12-270 |
Cow position: | chrX:11675168-11675426 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 195 |
Conread position: | 13-271 |
Cow position: | chrX:25106313-25106575 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 192 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 15-275 |
Cow position: | chrX:4597624-4597357 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 199 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 92, 57 |
Conread position: | 16-259 |
Cow position: | chrX:9910647-9910399 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 185 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 25, 39 |
Conread position: | 16-269 |
Cow position: | chrX:31816798-31817033 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 190 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 19, 133 |
Conread position: | 16-276 |
Cow position: | chrX:12688978-12688715 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 196 |
Conread position: | 19-172 |
Cow position: | chrX:1426870-1427035 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 126 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 32-133 |
Cow position: | chrX:40349482-40349580 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 88 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 39-275 |
Cow position: | chrX:18517918-18518165 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 184 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 52-275 |
Cow position: | chrX:19217182-19216955 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 177 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 69, 157 |
Conread position: | 53-258 |
Cow position: | chrX:28938938-28939146 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 154 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 58-269 |
Cow position: | chrX:4590103-4590306 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 169 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 141, 65 |
Conread position: | 66-275 |
Cow position: | chrX:9051276-9051068 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 149 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 82, 140 |
Conread position: | 68-271 |
Cow position: | chrX:24286122-24286319 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 157 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 69-272 |
Cow position: | chrX:40353471-40353664 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 163 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 89-259 |
Cow position: | chrX:37956752-37956919 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 126 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 96-258 |
Cow position: | chrX:24952185-24952018 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 130 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 60, 120 |
Conread position: | 98-275 |
Cow position: | chrX:20504889-20505068 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 144 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 58, 40 |
Conread position: | 119-275 |
Cow position: | chrX:19127430-19127275 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 130 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 38, 58 |
Conread position: | 145-269 |
Cow position: | chrX:5675778-5675655 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 95 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 150-258 |
Cow position: | chrX:11982838-11982946 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 86 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 150-275 |
Cow position: | chrX:4625142-4625267 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 151-275 |
Cow position: | chrX:18700123-18699998 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.