Cow genome map

Conread name: rplun0132_i4.y1

Conread position: 14-381
Cow position: chr16:25157817-25157435 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 335

Conread position: 15-376
Cow position: chr16:6390071-6389688 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 31

Conread position: 17-328
Cow position: chr16:43745-44055 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 20, 65

Conread position: 18-384
Cow position: chr16:7043346-7042956 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 64

Conread position: 25-377
Cow position: chr16:47367580-47367938 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 84, 56

Conread position: 26-256
Cow position: chr16:16543052-16543288 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 86, 18

Conread position: 27-384
Cow position: chr16:20475300-20475679 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 85, 25

Conread position: 32-207
Cow position: chr16:45704196-45704013 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 49

Conread position: 32-307
Cow position: chr16:14352082-14351787 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 79, 14

Conread position: 32-384
Cow position: chr16:1734340-1734712 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 49

Conread position: 32-384
Cow position: chr16:8813505-8813129 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 50

Conread position: 32-384
Cow position: chr16:11007306-11007700 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 21

Conread position: 32-384
Cow position: chr16:49516182-49515807 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 39

Conread position: 33-294
Cow position: chr16:237081-237358 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 48

Conread position: 33-347
Cow position: chr16:600021-600359 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 12

Conread position: 33-376
Cow position: chr16:41834466-41834833 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 57

Conread position: 33-378
Cow position: chr16:25173841-25174204 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 49

Conread position: 33-384
Cow position: chr16:14029548-14029180 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 48

Conread position: 33-384
Cow position: chr16:29539210-29538837 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 33-384
Cow position: chr16:44689542-44689180 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 48

Conread position: 34-360
Cow position: chr16:417499-417845 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 12

Conread position: 34-360
Cow position: chr16:42074295-42073949 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 47

Conread position: 34-384
Cow position: chr16:16032487-16032858 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 77, 47

Conread position: 34-384
Cow position: chr16:23563055-23563409 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 48

Conread position: 35-207
Cow position: chr16:45755022-45754846 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 46

Conread position: 35-258
Cow position: chr16:39456993-39457234 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 46

Conread position: 35-301
Cow position: chr16:4972921-4972634 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 76, 46

Conread position: 35-309
Cow position: chr16:2408289-2407994 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 47

Conread position: 35-347
Cow position: chr16:27013001-27013333 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 46

Conread position: 35-360
Cow position: chr16:49742925-49742577 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 135

Conread position: 35-378
Cow position: chr16:41036422-41036070 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 46

Conread position: 35-380
Cow position: chr16:21018163-21018530 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 46

Conread position: 35-382
Cow position: chr16:23059483-23059116 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 77, 46

Conread position: 35-383
Cow position: chr16:5416671-5416299 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 11

Conread position: 35-384
Cow position: chr16:15979773-15979402 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 11

Conread position: 35-384
Cow position: chr16:20204607-20204956 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 46

Conread position: 35-384
Cow position: chr16:23533395-23533025 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 46

Conread position: 35-384
Cow position: chr16:29158221-29158576 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 47

Conread position: 35-384
Cow position: chr16:47018150-47017792 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 39

Conread position: 35-384
Cow position: chr16:50190510-50190146 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 46

Conread position: 35-384
Cow position: chr16:51087387-51087758 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 46

Conread position: 35-384
Cow position: chr16:52526835-52527204 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 46

Conread position: 36-193
Cow position: chr16:5352591-5352430 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 47

Conread position: 36-201
Cow position: chr16:37058408-37058236 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 45

Conread position: 36-203
Cow position: chr16:45654976-45654800 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 45

Conread position: 36-206
Cow position: chr16:5833403-5833581 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 76, 45

Conread position: 36-221
Cow position: chr16:53612407-53612599 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 45

Conread position: 36-261
Cow position: chr16:37388193-37387952 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 45

Conread position: 36-262
Cow position: chr16:25964514-25964750 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 39, 190

Conread position: 36-292
Cow position: chr16:8871837-8871560 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 33

Conread position: 36-309
Cow position: chr16:7541086-7541378 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 15, 46

Conread position: 36-309
Cow position: chr16:24636909-24636619 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 45

Conread position: 36-309
Cow position: chr16:26990335-26990043 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 75, 45

Conread position: 36-309
Cow position: chr16:51400948-51400660 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 96, 9

Conread position: 36-326
Cow position: chr16:28268111-28267805 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 47

Conread position: 36-329
Cow position: chr16:9785920-9786232 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-336
Cow position: chr16:25168841-25169153 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 35

Conread position: 36-336
Cow position: chr16:40879197-40879520 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-347
Cow position: chr16:22320684-22320350 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-347
Cow position: chr16:23403419-23403752 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 41

Conread position: 36-357
Cow position: chr16:7303361-7303706 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-357
Cow position: chr16:27730776-27730433 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 75, 45

Conread position: 36-360
Cow position: chr16:9417468-9417808 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 227
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 48

Conread position: 36-360
Cow position: chr16:15187669-15188010 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-370
Cow position: chr16:15369596-15369953 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 9

Conread position: 36-381
Cow position: chr16:7457377-7457014 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 81, 46

Conread position: 36-381
Cow position: chr16:54703101-54703456 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 76, 45

Conread position: 36-382
Cow position: chr16:2233121-2232753 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 46

Conread position: 36-383
Cow position: chr16:25893113-25893478 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr16:41139-41514 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-384
Cow position: chr16:701866-702225 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr16:2480544-2480183 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 194

Conread position: 36-384
Cow position: chr16:2960284-2960655 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr16:3332508-3332866 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr16:4722083-4722454 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 36-384
Cow position: chr16:4756628-4756984 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 45

Conread position: 36-384
Cow position: chr16:5350903-5350532 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:5435430-5435801 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:5665706-5666074 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:5895048-5895406 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 40

Conread position: 36-384
Cow position: chr16:6677326-6677693 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 45

Conread position: 36-384
Cow position: chr16:7385370-7385741 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:8883538-8883909 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:10440844-10441214 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 44

Conread position: 36-384
Cow position: chr16:11633239-11632868 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:12160678-12160317 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 47

Conread position: 36-384
Cow position: chr16:12485695-12485324 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr16:14040030-14040401 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:14100457-14100815 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 36-384
Cow position: chr16:14570197-14570551 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 47

Conread position: 36-384
Cow position: chr16:15349549-15349186 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:15495059-15495426 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:16150143-16149772 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 200

Conread position: 36-384
Cow position: chr16:17142008-17142375 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr16:18212590-18212219 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:18650979-18650608 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 45

Conread position: 36-384
Cow position: chr16:18975473-18975844 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:19081657-19082022 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:20278445-20278816 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr16:20502640-20503007 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:23773070-23772699 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:23810126-23810488 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 74, 34

Conread position: 36-384
Cow position: chr16:23985918-23986289 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 46

Conread position: 36-384
Cow position: chr16:24209793-24209422 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 36-384
Cow position: chr16:24240795-24240424 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr16:24407515-24407888 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 45

Conread position: 36-384
Cow position: chr16:24987899-24987527 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr16:25075198-25075569 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr16:25454856-25454502 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:25879921-25880291 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr16:26627357-26627727 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:27593217-27592848 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:28193695-28193325 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 45

Conread position: 36-384
Cow position: chr16:28206506-28206135 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:28468518-28468147 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:31425663-31426030 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 39

Conread position: 36-384
Cow position: chr16:32118184-32118553 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr16:39033740-39033376 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr16:39615827-39616191 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr16:41575848-41576195 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 47

Conread position: 36-384
Cow position: chr16:42211101-42211472 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:43894657-43894287 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 53

Conread position: 36-384
Cow position: chr16:44450547-44450919 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 36-384
Cow position: chr16:45534067-45534429 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr16:46555027-46555398 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr16:47403985-47404356 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-384
Cow position: chr16:47772869-47773234 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr16:48411240-48411620 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:49096569-49096940 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr16:49780345-49779974 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:52952635-52952264 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:54231743-54231377 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr16:56913633-56913265 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 45

Conread position: 37-218
Cow position: chr16:51997731-51997550 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 44

Conread position: 37-336
Cow position: chr16:29323370-29323065 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 41, 49

Conread position: 37-346
Cow position: chr16:41624084-41623773 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 69, 44

Conread position: 37-384
Cow position: chr16:1563782-1563411 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 44

Conread position: 37-384
Cow position: chr16:15179297-15179642 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 75, 42

Conread position: 37-384
Cow position: chr16:23249349-23248986 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 44

Conread position: 37-384
Cow position: chr16:24147258-24147616 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 277

Conread position: 37-384
Cow position: chr16:34482768-34483123 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 44

Conread position: 37-384
Cow position: chr16:42079744-42079393 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 46

Conread position: 37-384
Cow position: chr16:50712833-50712463 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 44

Conread position: 40-384
Cow position: chr16:3769402-3769032 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 41

Conread position: 40-384
Cow position: chr16:7467221-7467584 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 34

Conread position: 41-381
Cow position: chr16:26500265-26500603 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 40

Conread position: 41-384
Cow position: chr16:49577586-49577950 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 9, 42

Conread position: 43-377
Cow position: chr16:30052557-30052904 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 66, 41

Conread position: 45-262
Cow position: chr16:42254699-42254469 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 36

Conread position: 46-360
Cow position: chr16:48955708-48956043 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 35

Conread position: 46-384
Cow position: chr16:19409740-19409379 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 35

Conread position: 48-372
Cow position: chr16:37670890-37670545 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 33

Conread position: 53-384
Cow position: chr16:55150952-55151299 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 56, 28

Conread position: 55-377
Cow position: chr16:49510194-49509849 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 54, 26

Conread position: 56-376
Cow position: chr16:44973122-44972776 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 56-384
Cow position: chr16:7009952-7010295 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 26

Conread position: 57-384
Cow position: chr16:6380012-6379663 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 24

Conread position: 62-384
Cow position: chr16:3027063-3027387 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 50, 19

Conread position: 64-384
Cow position: chr16:53622209-53621866 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 48, 17

Conread position: 67-384
Cow position: chr16:18948724-18949051 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 33, 14

Conread position: 71-384
Cow position: chr16:49170236-49169914 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 11

Conread position: 75-384
Cow position: chr16:43813206-43813524 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 287

Conread position: 78-384
Cow position: chr16:825119-825446 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 11

Conread position: 81-384
Cow position: chr16:34022196-34021876 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 88

Conread position: 85-384
Cow position: chr16:49127049-49126735 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 142

Conread position: 88-369
Cow position: chr16:30638470-30638763 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 174

Conread position: 92-384
Cow position: chr16:25042725-25043023 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 12, 17

Conread position: 95-384
Cow position: chr16:20968215-20967909 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 69

Conread position: 97-384
Cow position: chr16:5726084-5726377 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 23, 9

Conread position: 97-384
Cow position: chr16:14722587-14722296 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 11

Conread position: 97-384
Cow position: chr16:43987026-43986723 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 33, 11

Conread position: 108-298
Cow position: chr16:28112837-28112641 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 108-336
Cow position: chr16:3632751-3632992 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 108-376
Cow position: chr16:24673638-24673899 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 74

Conread position: 108-384
Cow position: chr16:15804992-15805278 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 22, 191

Conread position: 108-384
Cow position: chr16:15812768-15813058 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 35

Conread position: 108-384
Cow position: chr16:23872481-23872201 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 110

Conread position: 108-384
Cow position: chr16:24753242-24752951 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 22, 60

Conread position: 108-384
Cow position: chr16:34809054-34809345 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 108-384
Cow position: chr16:42745799-42745508 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 108-384
Cow position: chr16:45683372-45683667 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 120

Conread position: 117-308
Cow position: chr16:29679991-29679799 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 9

Conread position: 123-384
Cow position: chr16:45158273-45157994 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 108

Conread position: 123-384
Cow position: chr16:46551995-46552253 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 98

Conread position: 125-377
Cow position: chr16:1223959-1223693 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 27

Conread position: 125-384
Cow position: chr16:18678379-18678642 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 5, 193

Conread position: 126-384
Cow position: chr16:45551052-45551318 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 69, 135

Conread position: 127-309
Cow position: chr16:2395086-2395279 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 127-343
Cow position: chr16:18617047-18616818 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 77, 217

Conread position: 127-377
Cow position: chr16:47627015-47626755 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 25

Conread position: 127-383
Cow position: chr16:56149488-56149752 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 96

Conread position: 127-384
Cow position: chr16:21461533-21461793 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 89, 183

Conread position: 127-384
Cow position: chr16:24228946-24229212 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 166

Conread position: 127-384
Cow position: chr16:26671425-26671161 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 19

Conread position: 127-384
Cow position: chr16:51042810-51043077 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 138-370
Cow position: chr16:49188544-49188309 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 69

Conread position: 139-384
Cow position: chr16:15655552-15655800 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 57, 77

Conread position: 156-384
Cow position: chr16:16596469-16596711 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 161-384
Cow position: chr16:3597290-3597058 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 61

Conread position: 165-384
Cow position: chr16:24974710-24974484 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 55, 0

Show alignments to all cow chromosomes.