Cow genome map
| Conread name: | rplun0132_i4.y1 |
| Conread position: | 20-384 |
| Cow position: | chr21:1766075-1765698 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 26-301 |
| Cow position: | chr21:22315986-22316267 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 33-207 |
| Cow position: | chr21:39400700-39400882 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 48 |
| Conread position: | 33-274 |
| Cow position: | chr21:47532198-47532458 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 48 |
| Conread position: | 33-344 |
| Cow position: | chr21:21412125-21411806 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 84, 49 |
| Conread position: | 33-376 |
| Cow position: | chr21:4812879-4812512 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 79, 12 |
| Conread position: | 33-377 |
| Cow position: | chr21:5630555-5630197 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 48 |
| Conread position: | 33-384 |
| Cow position: | chr21:4098038-4098398 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 33-384 |
| Cow position: | chr21:4733073-4732706 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 33-384 |
| Cow position: | chr21:13302668-13303033 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 33-384 |
| Cow position: | chr21:23801974-23801604 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 50 |
| Conread position: | 33-384 |
| Cow position: | chr21:48262280-48262647 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 48 |
| Conread position: | 34-347 |
| Cow position: | chr21:18819165-18818847 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 34-360 |
| Cow position: | chr21:18787044-18786701 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 34-384 |
| Cow position: | chr21:81211-81581 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 34-384 |
| Cow position: | chr21:18931640-18932011 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 35-220 |
| Cow position: | chr21:34657457-34657650 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 35-222 |
| Cow position: | chr21:27263149-27263341 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 35-297 |
| Cow position: | chr21:44219146-44219425 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 35-301 |
| Cow position: | chr21:2537691-2537417 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 81, 46 |
| Conread position: | 35-308 |
| Cow position: | chr21:17721047-17721337 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 87, 46 |
| Conread position: | 35-331 |
| Cow position: | chr21:42460596-42460289 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 227 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 35-347 |
| Cow position: | chr21:9895823-9896145 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 77, 47 |
| Conread position: | 35-366 |
| Cow position: | chr21:17474185-17474535 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 35-384 |
| Cow position: | chr21:3046802-3047173 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 35-384 |
| Cow position: | chr21:4559608-4559235 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 35-384 |
| Cow position: | chr21:4586213-4585838 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 41 |
| Conread position: | 35-384 |
| Cow position: | chr21:7597805-7597433 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 46 |
| Conread position: | 35-384 |
| Cow position: | chr21:9010641-9010267 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 35-384 |
| Cow position: | chr21:12153290-12153650 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 47 |
| Conread position: | 35-384 |
| Cow position: | chr21:17478538-17478903 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 35-384 |
| Cow position: | chr21:22719632-22719264 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 35-384 |
| Cow position: | chr21:28476768-28477133 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 46 |
| Conread position: | 36-262 |
| Cow position: | chr21:23585559-23585805 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-283 |
| Cow position: | chr21:17144155-17144422 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 36-286 |
| Cow position: | chr21:42364403-42364671 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 36-308 |
| Cow position: | chr21:31275810-31276096 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 36-309 |
| Cow position: | chr21:6966005-6965713 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-314 |
| Cow position: | chr21:2928407-2928110 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 64, 45 |
| Conread position: | 36-320 |
| Cow position: | chr21:38866145-38865838 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-335 |
| Cow position: | chr21:20244133-20243813 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 36-336 |
| Cow position: | chr21:49655716-49655395 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-354 |
| Cow position: | chr21:34900207-34899866 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-360 |
| Cow position: | chr21:16768656-16768309 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 36-360 |
| Cow position: | chr21:30850329-30850676 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-360 |
| Cow position: | chr21:33983808-33983459 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 36-370 |
| Cow position: | chr21:48234849-48234495 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 45 |
| Conread position: | 36-376 |
| Cow position: | chr21:36163817-36163459 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 10 |
| Conread position: | 36-376 |
| Cow position: | chr21:48291888-48291528 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 36-382 |
| Cow position: | chr21:5596257-5596613 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 255 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 36-383 |
| Cow position: | chr21:4079490-4079850 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 36-383 |
| Cow position: | chr21:31512803-31512435 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 30 |
| Conread position: | 36-383 |
| Cow position: | chr21:36506371-36506005 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 36-384 |
| Cow position: | chr21:43169-43541 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:149614-149984 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:2293715-2293345 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:3497039-3496668 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:4035812-4035454 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 36-384 |
| Cow position: | chr21:4541711-4541349 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 36-384 |
| Cow position: | chr21:4719353-4718982 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:7047715-7047347 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:8071632-8071261 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 36-384 |
| Cow position: | chr21:10570754-10571108 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:10853732-10854094 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:11509408-11509777 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:16575980-16575609 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:17207645-17208005 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:18285273-18285639 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:18573990-18574352 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:18837183-18836822 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 36-384 |
| Cow position: | chr21:19351394-19351023 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:19627241-19626872 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:22855373-22855730 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 36-384 |
| Cow position: | chr21:23329876-23329505 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:23341118-23341489 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:25598140-25598502 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:26875059-26875429 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 23 |
| Conread position: | 36-384 |
| Cow position: | chr21:27066132-27065762 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 36-384 |
| Cow position: | chr21:27125251-27124883 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:27148085-27147714 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:27620035-27619682 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 90 |
| Conread position: | 36-384 |
| Cow position: | chr21:28598053-28598403 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:28915508-28915139 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:28988759-28989121 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 36-384 |
| Cow position: | chr21:30297946-30298317 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:30595623-30595253 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:30627612-30627250 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:31949883-31950251 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:32237806-32238177 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:33257023-33257392 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:33710033-33709662 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:33728574-33728944 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:33832514-33832139 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:34255112-34254771 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 153, 49 |
| Conread position: | 36-384 |
| Cow position: | chr21:36376457-36376818 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:36534741-36534376 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:36892765-36892394 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:37298607-37298978 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:37923643-37924014 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:38899921-38900284 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 20 |
| Conread position: | 36-384 |
| Cow position: | chr21:39700966-39700597 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 72, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:42917260-42917631 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:43403971-43403600 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:44762213-44761844 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 36-384 |
| Cow position: | chr21:44862128-44861754 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 36-384 |
| Cow position: | chr21:47168427-47168799 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:47648810-47649181 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:48195918-48196277 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 36-384 |
| Cow position: | chr21:48273730-48273360 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 37-219 |
| Cow position: | chr21:20263208-20263018 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 37-309 |
| Cow position: | chr21:23501206-23500915 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 37-332 |
| Cow position: | chr21:27342933-27342626 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 37-376 |
| Cow position: | chr21:42842820-42842459 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 14 |
| Conread position: | 37-381 |
| Cow position: | chr21:1057930-1058306 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 51 |
| Conread position: | 37-384 |
| Cow position: | chr21:39470296-39469927 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 38-384 |
| Cow position: | chr21:25156753-25157122 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 74, 43 |
| Conread position: | 39-384 |
| Cow position: | chr21:39077736-39077382 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 40-384 |
| Cow position: | chr21:18851241-18850893 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 41 |
| Conread position: | 40-384 |
| Cow position: | chr21:28028101-28028470 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 43 |
| Conread position: | 40-384 |
| Cow position: | chr21:42558245-42558612 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 40-384 |
| Cow position: | chr21:47977738-47978105 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 41-384 |
| Cow position: | chr21:4278782-4279144 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 41-384 |
| Cow position: | chr21:12802640-12802275 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 41-384 |
| Cow position: | chr21:13111650-13111289 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 41-384 |
| Cow position: | chr21:26633758-26633392 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 41-384 |
| Cow position: | chr21:26830092-26829729 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 41-384 |
| Cow position: | chr21:28210334-28210694 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 41-384 |
| Cow position: | chr21:45782260-45781899 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 42-351 |
| Cow position: | chr21:4862002-4861681 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 36, 131 |
| Conread position: | 42-384 |
| Cow position: | chr21:41796254-41795887 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 45-384 |
| Cow position: | chr21:15585243-15584892 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 46-384 |
| Cow position: | chr21:20588184-20588539 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 46-384 |
| Cow position: | chr21:23294008-23293652 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 63, 35 |
| Conread position: | 47-384 |
| Cow position: | chr21:38450516-38450174 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 52-384 |
| Cow position: | chr21:35742983-35742645 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 53-383 |
| Cow position: | chr21:26240750-26241079 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 77, 28 |
| Conread position: | 69-336 |
| Cow position: | chr21:28441943-28442217 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 72-347 |
| Cow position: | chr21:46599336-46599059 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 77-384 |
| Cow position: | chr21:39764031-39764353 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 86-374 |
| Cow position: | chr21:33619972-33620276 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 97-288 |
| Cow position: | chr21:37147242-37147039 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 98-384 |
| Cow position: | chr21:12076193-12075894 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 101-384 |
| Cow position: | chr21:24606624-24606915 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 29, 7 |
| Conread position: | 108-347 |
| Cow position: | chr21:30159518-30159268 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 108-360 |
| Cow position: | chr21:28625267-28625522 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 22, 202 |
| Conread position: | 108-377 |
| Cow position: | chr21:25813868-25813596 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 108-384 |
| Cow position: | chr21:10668779-10668505 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 19, 197 |
| Conread position: | 108-384 |
| Cow position: | chr21:26855146-26854855 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 108-384 |
| Cow position: | chr21:27864309-27864012 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 130 |
| Conread position: | 108-384 |
| Cow position: | chr21:33349921-33350211 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 110-258 |
| Cow position: | chr21:13678172-13678019 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 127-328 |
| Cow position: | chr21:15444479-15444267 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 73, 122 |
| Conread position: | 127-360 |
| Cow position: | chr21:451444-451694 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 81, 99 |
| Conread position: | 127-375 |
| Cow position: | chr21:33947834-33947577 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 84, 8 |
| Conread position: | 127-381 |
| Cow position: | chr21:37874100-37873836 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 127-384 |
| Cow position: | chr21:29214917-29214647 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 127-384 |
| Cow position: | chr21:37518128-37517856 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 127-384 |
| Cow position: | chr21:42443367-42443099 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 77, 138 |
| Conread position: | 140-308 |
| Cow position: | chr21:3629216-3629038 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 150 |
| Conread position: | 140-384 |
| Cow position: | chr21:26744705-26744449 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 64, 98 |
Show alignments to all cow chromosomes.