Cow genome map


           Conread name:
           rplun0132_i4.y1
        

               Conread position:
               26-384
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               31-245
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               32-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 51
               

               Conread position:
               33-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               33-384
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               259
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               33-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               33-384
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 48
               

               Conread position:
               33-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 23
               

               Conread position:
               34-360
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               34-382
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               265
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               77, 47
               

               Conread position:
               34-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               35-309
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               72, 46
               

               Conread position:
               35-375
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               243
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               74, 128
               

               Conread position:
               35-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 11
               

               Conread position:
               35-384
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 26
               

               Conread position:
               35-384
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               35-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 47
               

               Conread position:
               36-187
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 46
               

               Conread position:
               36-267
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               36-304
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               36-307
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-309
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               74, 45
               

               Conread position:
               36-309
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               36-309
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-340
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               36-360
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               36-360
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               36-374
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 15
               

               Conread position:
               36-382
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               36-383
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 45
               

               Conread position:
               36-383
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 47
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 40
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               39, 194
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               259
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               73, 24
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 47
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 40
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               37-307
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               71, 44
               

               Conread position:
               37-325
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               37-339
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               37-375
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               76, 44
               

               Conread position:
               37-377
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               72, 46
               

               Conread position:
               37-384
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 29
               

               Conread position:
               37-384
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               69, 44
               

               Conread position:
               38-371
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 7
               

               Conread position:
               40-212
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               40-357
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               71, 41
               

               Conread position:
               40-382
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 41
               

               Conread position:
               40-384
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 41
               

               Conread position:
               40-384
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 21
               

               Conread position:
               40-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 41
               

               Conread position:
               40-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               41-377
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 40
               

               Conread position:
               41-383
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               41-384
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               41-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               42-383
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 39
               

               Conread position:
               45-360
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 10
               

               Conread position:
               46-336
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               46-384
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               66, 37
               

               Conread position:
               46-384
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 35
               

               Conread position:
               55-359
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               56-383
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               67-282
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               67-384
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               85-320
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               92-336
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               210, 38
               

               Conread position:
               93-380
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               96-328
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 113
               

               Conread position:
               101-294
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               108-328
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               108-384
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               108-384
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 166
               

               Conread position:
               109-384
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               21, 119
               

               Conread position:
               127-328
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               11, 74
               

               Conread position:
               127-376
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 150
               

               Conread position:
               127-376
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               84, 108
               

               Conread position:
               141-384
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               62, 198
               

               Conread position:
               163-384
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               37, 64
               
Show alignments to all cow chromosomes.