Cow genome map
Conread name: | rplun0132_i4.y1 |
Conread position: | 17-381 |
Cow position: | chr27:13183017-13182631 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 66 |
Conread position: | 33-384 |
Cow position: | chr27:12277394-12277765 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 48 |
Conread position: | 33-384 |
Cow position: | chr27:25112445-25112825 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 48 |
Conread position: | 34-384 |
Cow position: | chr27:19424091-19423717 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 255 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 77, 47 |
Conread position: | 34-384 |
Cow position: | chr27:24295977-24295601 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 48 |
Conread position: | 35-203 |
Cow position: | chr27:16788011-16787834 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 135 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 77, 46 |
Conread position: | 35-256 |
Cow position: | chr27:4834429-4834668 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 175 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 27, 45 |
Conread position: | 35-382 |
Cow position: | chr27:28984056-28984423 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 46 |
Conread position: | 35-384 |
Cow position: | chr27:11489909-11490279 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 11 |
Conread position: | 35-384 |
Cow position: | chr27:26785104-26785470 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 46 |
Conread position: | 36-207 |
Cow position: | chr27:1536457-1536637 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 137 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-221 |
Cow position: | chr27:14669478-14669671 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 141 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 76, 45 |
Conread position: | 36-295 |
Cow position: | chr27:9970459-9970738 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 212 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 73, 45 |
Conread position: | 36-309 |
Cow position: | chr27:8592669-8592954 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 205 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 53, 45 |
Conread position: | 36-309 |
Cow position: | chr27:12239356-12239648 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 217 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 76, 45 |
Conread position: | 36-324 |
Cow position: | chr27:3990512-3990206 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 223 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-331 |
Cow position: | chr27:17565346-17565045 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 206 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 73, 45 |
Conread position: | 36-342 |
Cow position: | chr27:5983742-5983414 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 236 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-360 |
Cow position: | chr27:4982660-4982995 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-369 |
Cow position: | chr27:15867013-15866657 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 247 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 75, 9 |
Conread position: | 36-384 |
Cow position: | chr27:165631-165262 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 45 |
Conread position: | 36-384 |
Cow position: | chr27:791758-791387 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:1501802-1502152 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 46 |
Conread position: | 36-384 |
Cow position: | chr27:1520968-1521338 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 194 |
Conread position: | 36-384 |
Cow position: | chr27:2001133-2001503 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:2331791-2332159 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:3232246-3231879 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:3649769-3650140 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 45 |
Conread position: | 36-384 |
Cow position: | chr27:3653412-3653041 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:4824111-4824458 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 41 |
Conread position: | 36-384 |
Cow position: | chr27:8201223-8201595 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:8972732-8973104 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 268 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 74, 45 |
Conread position: | 36-384 |
Cow position: | chr27:9262989-9262619 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 262 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 70, 45 |
Conread position: | 36-384 |
Cow position: | chr27:10579235-10579602 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:11481219-11481590 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:12006436-12006807 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 45 |
Conread position: | 36-384 |
Cow position: | chr27:13353594-13353964 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 45 |
Conread position: | 36-384 |
Cow position: | chr27:14297495-14297864 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:15033603-15033233 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:15272782-15272418 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 45 |
Conread position: | 36-384 |
Cow position: | chr27:16031109-16030739 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:20810704-20811075 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:21350135-21350504 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 45 |
Conread position: | 36-384 |
Cow position: | chr27:22797371-22797000 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 45 |
Conread position: | 36-384 |
Cow position: | chr27:25784471-25784105 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 45 |
Conread position: | 36-384 |
Cow position: | chr27:29036094-29035723 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 45 |
Conread position: | 37-382 |
Cow position: | chr27:19523420-19523053 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 44 |
Conread position: | 38-384 |
Cow position: | chr27:26856328-26856699 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 39-384 |
Cow position: | chr27:10383728-10384089 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 44 |
Conread position: | 40-384 |
Cow position: | chr27:26330224-26330586 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 41 |
Conread position: | 41-360 |
Cow position: | chr27:26654164-26653836 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 229 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 64, 40 |
Conread position: | 41-384 |
Cow position: | chr27:16332186-16331830 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 40 |
Conread position: | 41-384 |
Cow position: | chr27:29811596-29811960 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 30 |
Conread position: | 46-384 |
Cow position: | chr27:9332965-9333326 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 35 |
Conread position: | 49-268 |
Cow position: | chr27:816462-816223 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 181 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 59, 34 |
Conread position: | 56-384 |
Cow position: | chr27:10324618-10324276 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 19 |
Conread position: | 56-384 |
Cow position: | chr27:13422856-13422505 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 25 |
Conread position: | 61-384 |
Cow position: | chr27:13409307-13409655 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 23 |
Conread position: | 83-384 |
Cow position: | chr27:13272900-13273211 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 223 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 29, 134 |
Conread position: | 93-360 |
Cow position: | chr27:4805143-4805414 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 198 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 38, 165 |
Conread position: | 108-309 |
Cow position: | chr27:723723-723936 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 163 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 22, 60 |
Conread position: | 108-309 |
Cow position: | chr27:13844345-13844132 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 155 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 22, 120 |
Conread position: | 108-384 |
Cow position: | chr27:9989511-9989222 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 213 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 22, 120 |
Conread position: | 109-384 |
Cow position: | chr27:23454349-23454631 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 210 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 18, 8 |
Conread position: | 126-376 |
Cow position: | chr27:30476861-30476597 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 184 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 52, 115 |
Conread position: | 127-308 |
Cow position: | chr27:27017206-27017396 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 82, 139 |
Conread position: | 127-384 |
Cow position: | chr27:12190661-12190933 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 127-384 |
Cow position: | chr27:19487597-19487325 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 203 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 27, 40 |
Show alignments to all cow chromosomes.