Cow genome map

Conread name: rplun0132_i4.y1

Conread position: 11-384
Cow position: chr3:22918718-22919110 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 29

Conread position: 14-309
Cow position: chr3:57742710-57743021 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 98, 32

Conread position: 14-382
Cow position: chr3:16005614-16005212 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 9, 34

Conread position: 23-384
Cow position: chr3:6170677-6171061 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 58

Conread position: 25-376
Cow position: chr3:23944170-23944540 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 58

Conread position: 26-377
Cow position: chr3:73936984-73936619 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 31

Conread position: 29-336
Cow position: chr3:18184126-18184453 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 52

Conread position: 31-205
Cow position: chr3:71245808-71245992 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 51

Conread position: 32-309
Cow position: chr3:3653079-3652795 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 87, 255

Conread position: 32-380
Cow position: chr3:29391907-29391547 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 49

Conread position: 32-384
Cow position: chr3:3031447-3031820 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 23

Conread position: 33-206
Cow position: chr3:7772802-7772637 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 33-214
Cow position: chr3:13352912-13352734 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 23

Conread position: 33-284
Cow position: chr3:42500286-42500548 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 91, 48

Conread position: 33-308
Cow position: chr3:15988155-15988447 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 48

Conread position: 33-309
Cow position: chr3:33326602-33326894 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 48

Conread position: 33-314
Cow position: chr3:56102955-56103253 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 76, 50

Conread position: 33-324
Cow position: chr3:77225949-77226246 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 78, 44

Conread position: 33-328
Cow position: chr3:48095884-48095573 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 50

Conread position: 33-350
Cow position: chr3:5951405-5951070 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 78, 12

Conread position: 33-378
Cow position: chr3:67745566-67745195 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 51

Conread position: 33-384
Cow position: chr3:19718053-19717683 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 48

Conread position: 33-384
Cow position: chr3:26919937-26920317 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 76, 48

Conread position: 33-384
Cow position: chr3:27547220-27546846 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 70, 48

Conread position: 33-384
Cow position: chr3:40101641-40101265 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 76, 46

Conread position: 33-384
Cow position: chr3:84198998-84199359 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 23

Conread position: 34-334
Cow position: chr3:36671401-36671078 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 77, 47

Conread position: 34-376
Cow position: chr3:61677753-61678114 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 12

Conread position: 34-384
Cow position: chr3:16156741-16157106 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 12

Conread position: 34-384
Cow position: chr3:21100022-21100393 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 22

Conread position: 35-208
Cow position: chr3:25753471-25753652 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 74, 46

Conread position: 35-262
Cow position: chr3:19794874-19794632 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 46

Conread position: 35-264
Cow position: chr3:39327763-39328005 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 73, 46

Conread position: 35-274
Cow position: chr3:77726668-77726908 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 42

Conread position: 35-336
Cow position: chr3:14724337-14724647 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 82, 46

Conread position: 35-360
Cow position: chr3:16293699-16293350 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 77, 46

Conread position: 35-360
Cow position: chr3:33254644-33254298 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 46

Conread position: 35-376
Cow position: chr3:76136536-76136901 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 46

Conread position: 35-381
Cow position: chr3:39878960-39878597 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 76, 11

Conread position: 35-382
Cow position: chr3:35884903-35884534 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 77, 46

Conread position: 35-382
Cow position: chr3:54876881-54877228 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 74, 46

Conread position: 35-384
Cow position: chr3:173720-174087 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 48

Conread position: 35-384
Cow position: chr3:14680306-14680671 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 9

Conread position: 35-384
Cow position: chr3:15656098-15655727 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 47

Conread position: 35-384
Cow position: chr3:15663230-15662877 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 9

Conread position: 35-384
Cow position: chr3:17059245-17058900 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 46

Conread position: 35-384
Cow position: chr3:20781235-20780871 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 11

Conread position: 35-384
Cow position: chr3:33125036-33124669 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 11

Conread position: 35-384
Cow position: chr3:34503916-34503549 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 47

Conread position: 35-384
Cow position: chr3:35056195-35056551 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 77, 46

Conread position: 35-384
Cow position: chr3:37599952-37600321 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 46

Conread position: 35-384
Cow position: chr3:37628103-37628472 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 46

Conread position: 35-384
Cow position: chr3:45184769-45184412 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 46

Conread position: 35-384
Cow position: chr3:46683051-46683423 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 46

Conread position: 35-384
Cow position: chr3:51256155-51256528 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 46

Conread position: 35-384
Cow position: chr3:63202455-63202820 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 74, 40

Conread position: 36-180
Cow position: chr3:74847960-74847809 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 46

Conread position: 36-206
Cow position: chr3:70322456-70322277 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 15

Conread position: 36-207
Cow position: chr3:8605691-8605515 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 81, 45

Conread position: 36-207
Cow position: chr3:15082722-15082545 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 23

Conread position: 36-221
Cow position: chr3:7677710-7677902 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 47

Conread position: 36-259
Cow position: chr3:53387893-53387658 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 45

Conread position: 36-260
Cow position: chr3:49931054-49931298 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 45

Conread position: 36-261
Cow position: chr3:64282097-64281861 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 73, 45

Conread position: 36-263
Cow position: chr3:28471572-28471815 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 45

Conread position: 36-275
Cow position: chr3:12665356-12665615 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 45

Conread position: 36-275
Cow position: chr3:18252766-18253020 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 45

Conread position: 36-300
Cow position: chr3:20074306-20074590 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 73, 45

Conread position: 36-301
Cow position: chr3:30351494-30351779 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 45

Conread position: 36-309
Cow position: chr3:597326-597610 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 47

Conread position: 36-309
Cow position: chr3:13723493-13723200 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 59, 45

Conread position: 36-309
Cow position: chr3:17460436-17460727 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 76, 16

Conread position: 36-309
Cow position: chr3:18886676-18886969 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 76, 45

Conread position: 36-309
Cow position: chr3:20999853-20999560 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 45

Conread position: 36-309
Cow position: chr3:31050791-31050513 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 184, 45

Conread position: 36-309
Cow position: chr3:40826615-40826908 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 75, 45

Conread position: 36-309
Cow position: chr3:49999355-49999648 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 75, 15

Conread position: 36-309
Cow position: chr3:72669341-72669049 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 81, 45

Conread position: 36-309
Cow position: chr3:81101297-81101590 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 75, 45

Conread position: 36-315
Cow position: chr3:29130313-29130607 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 45

Conread position: 36-326
Cow position: chr3:2904234-2903924 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 76, 45

Conread position: 36-327
Cow position: chr3:37451319-37451616 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 59, 45

Conread position: 36-330
Cow position: chr3:10371593-10371901 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 76, 45

Conread position: 36-334
Cow position: chr3:6864877-6865189 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-335
Cow position: chr3:11784582-11784900 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-336
Cow position: chr3:73416217-73416540 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 64, 45

Conread position: 36-339
Cow position: chr3:72175087-72174761 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-341
Cow position: chr3:42424281-42423956 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 47

Conread position: 36-345
Cow position: chr3:12673158-12672837 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-347
Cow position: chr3:14613251-14613580 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 45

Conread position: 36-350
Cow position: chr3:63688693-63688358 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 47

Conread position: 36-356
Cow position: chr3:59607511-59607848 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 45

Conread position: 36-357
Cow position: chr3:18814725-18815068 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 15

Conread position: 36-360
Cow position: chr3:6529211-6529558 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-360
Cow position: chr3:40336927-40336580 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 45

Conread position: 36-373
Cow position: chr3:31748897-31749245 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 68, 45

Conread position: 36-376
Cow position: chr3:23497539-23497181 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 73, 45

Conread position: 36-376
Cow position: chr3:63219153-63219505 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 25

Conread position: 36-376
Cow position: chr3:70914047-70913681 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 45

Conread position: 36-377
Cow position: chr3:9289825-9290185 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 234
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 81

Conread position: 36-377
Cow position: chr3:31934119-31933756 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 47

Conread position: 36-377
Cow position: chr3:54347186-54346825 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 45

Conread position: 36-379
Cow position: chr3:61538824-61539184 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 61

Conread position: 36-380
Cow position: chr3:6024640-6024273 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-380
Cow position: chr3:14279904-14280261 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 39

Conread position: 36-380
Cow position: chr3:14284952-14285313 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-380
Cow position: chr3:65989139-65989492 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 45

Conread position: 36-382
Cow position: chr3:18862659-18863025 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-382
Cow position: chr3:72633292-72633660 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-382
Cow position: chr3:74391687-74391322 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 70, 34

Conread position: 36-382
Cow position: chr3:79595852-79596203 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 161

Conread position: 36-384
Cow position: chr3:302439-302811 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 46

Conread position: 36-384
Cow position: chr3:2074999-2075370 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:2834320-2833949 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-384
Cow position: chr3:3837378-3837018 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:4135763-4135390 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:5474758-5475129 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-384
Cow position: chr3:6442287-6442656 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:6785536-6785903 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:7155588-7155217 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 36-384
Cow position: chr3:7245887-7245519 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 45

Conread position: 36-384
Cow position: chr3:10243878-10244249 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:11417765-11418136 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:12797843-12797472 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:12931985-12932356 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:13035277-13034906 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:13276063-13275688 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-384
Cow position: chr3:13360666-13361036 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:14466643-14466282 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 48

Conread position: 36-384
Cow position: chr3:14864101-14864470 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:17864647-17865018 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-384
Cow position: chr3:19753516-19753146 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:19881268-19881639 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:19958813-19959184 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:20379500-20379130 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:20475726-20476088 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:21082091-21082450 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 49

Conread position: 36-384
Cow position: chr3:21179040-21178667 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:21593503-21593871 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 15

Conread position: 36-384
Cow position: chr3:21779559-21779188 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:22220359-22220729 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr3:22352832-22353203 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:23010575-23010941 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 23

Conread position: 36-384
Cow position: chr3:23170006-23169647 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr3:24265417-24265787 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:24432600-24432966 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:24442884-24442517 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:24638630-24638991 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 9

Conread position: 36-384
Cow position: chr3:26566994-26567364 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 45

Conread position: 36-384
Cow position: chr3:26722593-26722230 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:26742654-26742287 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:26891709-26892080 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:26993343-26993711 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr3:28435480-28435118 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:29281978-29282343 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-384
Cow position: chr3:30321475-30321834 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:30615722-30615354 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:30752802-30753172 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:31418752-31419116 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 45

Conread position: 36-384
Cow position: chr3:31422908-31422536 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 205

Conread position: 36-384
Cow position: chr3:33469448-33469077 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 73, 10

Conread position: 36-384
Cow position: chr3:35043378-35043749 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:35612365-35612736 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:36121394-36121765 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:36874842-36874472 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:37894050-37894419 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:38869785-38870155 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:39231930-39232301 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:39921727-39921358 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:40520721-40520350 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:43525520-43525150 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 44

Conread position: 36-384
Cow position: chr3:45675559-45675188 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:45691823-45691470 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 73, 25

Conread position: 36-384
Cow position: chr3:45977718-45978089 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-384
Cow position: chr3:47078394-47078023 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 45

Conread position: 36-384
Cow position: chr3:47272660-47272289 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:47986658-47987029 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:49387867-49388239 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr3:49605223-49604857 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:49610988-49610626 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:49907814-49907445 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:49976308-49975939 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-384
Cow position: chr3:50347027-50347385 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 241
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 9

Conread position: 36-384
Cow position: chr3:50461536-50461893 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 40, 16

Conread position: 36-384
Cow position: chr3:52150067-52149696 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:53519022-53519372 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:54788303-54788675 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 48, 129

Conread position: 36-384
Cow position: chr3:55245762-55246133 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:56297603-56297974 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:56645112-56644741 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:58336525-58336896 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:58766362-58766717 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 76, 47

Conread position: 36-384
Cow position: chr3:59118560-59118189 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 45

Conread position: 36-384
Cow position: chr3:59332801-59333148 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 55, 150

Conread position: 36-384
Cow position: chr3:60932485-60932854 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr3:64293744-64294099 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 64, 47

Conread position: 36-384
Cow position: chr3:64376492-64376129 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 45

Conread position: 36-384
Cow position: chr3:64653887-64654256 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 235

Conread position: 36-384
Cow position: chr3:65085153-65085523 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 45

Conread position: 36-384
Cow position: chr3:65473648-65474017 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:66887979-66887603 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 45

Conread position: 36-384
Cow position: chr3:66977879-66978254 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 36-384
Cow position: chr3:68500678-68501047 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 45

Conread position: 36-384
Cow position: chr3:68696747-68696385 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:68870531-68870165 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 40

Conread position: 36-384
Cow position: chr3:69930617-69930247 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 45

Conread position: 36-384
Cow position: chr3:74060688-74061057 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 36-384
Cow position: chr3:75771916-75771545 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 36-384
Cow position: chr3:75997670-75997304 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 75, 45

Conread position: 36-384
Cow position: chr3:76864650-76865021 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 36-384
Cow position: chr3:79668329-79668700 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 45

Conread position: 37-193
Cow position: chr3:64135368-64135514 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 37-269
Cow position: chr3:54087156-54086914 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 44

Conread position: 37-327
Cow position: chr3:80277680-80277368 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 72, 44

Conread position: 37-342
Cow position: chr3:16869187-16868859 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 45

Conread position: 37-373
Cow position: chr3:24455312-24454965 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 44

Conread position: 37-377
Cow position: chr3:11509629-11509284 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 227
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 44

Conread position: 37-383
Cow position: chr3:6897046-6897413 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 44

Conread position: 37-384
Cow position: chr3:4030962-4031337 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 204

Conread position: 37-384
Cow position: chr3:34557151-34556800 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 38, 24

Conread position: 37-384
Cow position: chr3:45863707-45863347 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 71, 19

Conread position: 37-384
Cow position: chr3:45880956-45881320 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 39

Conread position: 37-384
Cow position: chr3:62793862-62793499 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 44

Conread position: 37-384
Cow position: chr3:65178591-65178961 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 44

Conread position: 38-332
Cow position: chr3:55374297-55374617 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 7

Conread position: 38-360
Cow position: chr3:40004277-40003944 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 43

Conread position: 40-376
Cow position: chr3:53047569-53047220 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 41

Conread position: 40-376
Cow position: chr3:54863397-54863041 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 41

Conread position: 40-376
Cow position: chr3:76187761-76188104 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 41

Conread position: 40-383
Cow position: chr3:2852023-2851649 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 17

Conread position: 40-384
Cow position: chr3:226667-226303 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 37

Conread position: 40-384
Cow position: chr3:40205626-40205992 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 41

Conread position: 40-384
Cow position: chr3:50921262-50921616 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 40-384
Cow position: chr3:56697062-56697427 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 71, 31

Conread position: 40-384
Cow position: chr3:80564018-80564388 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 16

Conread position: 41-384
Cow position: chr3:6838252-6838622 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 41-384
Cow position: chr3:19216123-19216487 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 65, 40

Conread position: 41-384
Cow position: chr3:46349450-46349801 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 244
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 10

Conread position: 41-384
Cow position: chr3:64024808-64024452 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 40

Conread position: 41-384
Cow position: chr3:73763408-73763047 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 40

Conread position: 42-360
Cow position: chr3:3552541-3552877 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 39

Conread position: 42-384
Cow position: chr3:42507990-42507624 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 41

Conread position: 43-384
Cow position: chr3:50217217-50217581 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 38

Conread position: 46-336
Cow position: chr3:37040517-37040816 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 27, 37

Conread position: 46-342
Cow position: chr3:4080776-4080467 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 9

Conread position: 46-360
Cow position: chr3:49336420-49336753 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 32

Conread position: 46-384
Cow position: chr3:19797877-19797514 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 36

Conread position: 46-384
Cow position: chr3:53414245-53414601 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 235
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 44

Conread position: 46-384
Cow position: chr3:56160597-56160237 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 35

Conread position: 47-384
Cow position: chr3:31021911-31022264 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 64, 34

Conread position: 48-382
Cow position: chr3:63176579-63176929 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 13

Conread position: 49-376
Cow position: chr3:16884086-16883751 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 31

Conread position: 52-382
Cow position: chr3:9639778-9639442 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 23

Conread position: 53-383
Cow position: chr3:11018688-11019032 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 28

Conread position: 55-384
Cow position: chr3:48599776-48600116 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 26

Conread position: 56-384
Cow position: chr3:39970828-39970478 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 5

Conread position: 56-384
Cow position: chr3:45947286-45946936 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 55, 25

Conread position: 56-384
Cow position: chr3:77366467-77366122 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 10

Conread position: 56-384
Cow position: chr3:81375013-81374662 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 25

Conread position: 67-384
Cow position: chr3:66623436-66623775 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 14

Conread position: 78-308
Cow position: chr3:11334602-11334353 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 11

Conread position: 85-295
Cow position: chr3:64683720-64683515 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 50, 21

Conread position: 96-301
Cow position: chr3:60891551-60891767 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 30, 131

Conread position: 96-384
Cow position: chr3:48528321-48528614 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 176

Conread position: 96-384
Cow position: chr3:77550251-77550545 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 171

Conread position: 97-262
Cow position: chr3:523498-523669 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 10

Conread position: 97-384
Cow position: chr3:70890734-70891032 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 11

Conread position: 98-384
Cow position: chr3:64171529-64171817 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 9

Conread position: 101-375
Cow position: chr3:76924002-76923727 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 7

Conread position: 101-383
Cow position: chr3:75479151-75479442 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 19, 128

Conread position: 101-384
Cow position: chr3:72776391-72776678 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 7

Conread position: 105-384
Cow position: chr3:13085245-13084952 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 22, 0

Conread position: 105-384
Cow position: chr3:61242678-61242968 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 169

Conread position: 107-376
Cow position: chr3:18246285-18246004 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 183

Conread position: 108-300
Cow position: chr3:12785265-12785061 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 22, 60

Conread position: 108-317
Cow position: chr3:34027464-34027245 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 213

Conread position: 108-326
Cow position: chr3:72603514-72603745 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 45

Conread position: 108-380
Cow position: chr3:82275370-82275084 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 61

Conread position: 108-383
Cow position: chr3:30567412-30567702 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 108-384
Cow position: chr3:5989265-5988973 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 108-384
Cow position: chr3:9665654-9665363 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 108-384
Cow position: chr3:21303286-21303006 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 112

Conread position: 108-384
Cow position: chr3:28922294-28922585 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 60

Conread position: 108-384
Cow position: chr3:34037267-34037558 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 109-384
Cow position: chr3:36571135-36570843 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 45, 55

Conread position: 119-384
Cow position: chr3:38346347-38346626 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 12, 121

Conread position: 122-382
Cow position: chr3:44536658-44536388 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 82, 142

Conread position: 125-384
Cow position: chr3:75158032-75157769 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 78, 132

Conread position: 127-328
Cow position: chr3:80582175-80582386 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 44, 36

Conread position: 127-347
Cow position: chr3:62611079-62611307 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 25

Conread position: 127-349
Cow position: chr3:54959051-54959287 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 100

Conread position: 127-376
Cow position: chr3:11278726-11278983 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 29, 25

Conread position: 127-380
Cow position: chr3:67021683-67021426 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 78, 214

Conread position: 127-384
Cow position: chr3:2024331-2024593 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 131

Conread position: 127-384
Cow position: chr3:39857017-39857271 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 181, 81

Conread position: 127-384
Cow position: chr3:43529083-43528812 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 65, 100

Conread position: 128-384
Cow position: chr3:56302486-56302219 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 66, 221

Conread position: 129-384
Cow position: chr3:15379888-15379621 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 230

Conread position: 173-346
Cow position: chr3:72132082-72131906 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 134, 0

Show alignments to all cow chromosomes.