Cow genome map
| Conread name: | rpro33_l22.y1 |
| Conread position: | 1-328 |
| Cow position: | chr10:50312614-50312949 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 2-389 |
| Cow position: | chr10:41388822-41388439 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 169, 86 |
| Conread position: | 11-338 |
| Cow position: | chr10:16476543-16476856 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 12 |
| Conread position: | 36-572 |
| Cow position: | chr10:19511934-19512462 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 24 |
| Conread position: | 36-572 |
| Cow position: | chr10:30685185-30684661 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 17 |
| Conread position: | 36-572 |
| Cow position: | chr10:38345034-38344508 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr10:38538177-38537645 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr10:62408523-62407992 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 36-577 |
| Cow position: | chr10:24977444-24976908 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 38-376 |
| Cow position: | chr10:62584530-62584857 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 39-572 |
| Cow position: | chr10:32557673-32558201 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 108 |
| Conread position: | 45-579 |
| Cow position: | chr10:5849299-5848768 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 45-579 |
| Cow position: | chr10:11698571-11699102 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 13 |
| Conread position: | 45-579 |
| Cow position: | chr10:56065000-56065532 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 49-571 |
| Cow position: | chr10:39040966-39040454 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 347 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 53-570 |
| Cow position: | chr10:19495957-19495430 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 335 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 53-572 |
| Cow position: | chr10:41157776-41158293 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 330 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 53-572 |
| Cow position: | chr10:41567431-41567951 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 53-579 |
| Cow position: | chr10:14804165-14804693 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 75-572 |
| Cow position: | chr10:7281731-7281236 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 9 |
| Conread position: | 77-546 |
| Cow position: | chr10:38403838-38403364 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 102 |
| Conread position: | 80-572 |
| Cow position: | chr10:39180144-39180641 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 329 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 80-572 |
| Cow position: | chr10:55093626-55094118 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 27 |
| Conread position: | 80-577 |
| Cow position: | chr10:39880014-39879502 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 328 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 67 |
| Conread position: | 92-572 |
| Cow position: | chr10:16925910-16926386 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 113-572 |
| Cow position: | chr10:2120617-2120160 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 113-572 |
| Cow position: | chr10:19715172-19714713 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 117-579 |
| Cow position: | chr10:28641934-28642392 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 307 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 121-572 |
| Cow position: | chr10:14335442-14334997 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr10:21400272-21399819 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr10:29846246-29845796 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr10:47907329-47907782 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 122-436 |
| Cow position: | chr10:1377647-1377961 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 123-566 |
| Cow position: | chr10:8326890-8326463 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 152-572 |
| Cow position: | chr10:29102152-29101737 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 171 |
| Conread position: | 184-577 |
| Cow position: | chr10:50135024-50135418 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 166, 59 |
| Conread position: | 192-572 |
| Cow position: | chr10:11685176-11684794 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 168, 200 |
| Conread position: | 207-577 |
| Cow position: | chr10:58813260-58812883 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 208-572 |
| Cow position: | chr10:280123-279756 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 152, 270 |
| Conread position: | 213-572 |
| Cow position: | chr10:42110905-42111258 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 213-572 |
| Cow position: | chr10:42749342-42749687 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 229-579 |
| Cow position: | chr10:46196013-46196370 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 122, 37 |
| Conread position: | 231-570 |
| Cow position: | chr10:33347856-33348195 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 120, 96 |
| Conread position: | 292-577 |
| Cow position: | chr10:29632197-29631914 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 355-579 |
| Cow position: | chr10:16477394-16477615 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 43, 103 |
Show alignments to all cow chromosomes.