Cow genome map
| Conread name: | rpro33_l22.y1 |
| Conread position: | 9-572 |
| Cow position: | chr14:33236918-33237459 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 9-579 |
| Cow position: | chr14:21743839-21744408 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 134 |
| Conread position: | 18-572 |
| Cow position: | chr14:44581255-44581786 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 361 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 34-140 |
| Cow position: | chr14:47641386-47641491 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 82 |
| Conread position: | 34-571 |
| Cow position: | chr14:17001158-17000628 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 27 |
| Conread position: | 36-439 |
| Cow position: | chr14:37223809-37224208 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-459 |
| Cow position: | chr14:22031517-22031087 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 140, 48 |
| Conread position: | 36-534 |
| Cow position: | chr14:48254397-48253908 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 327 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr14:11154258-11153730 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr14:20782364-20782894 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 12 |
| Conread position: | 37-572 |
| Cow position: | chr14:13864173-13863658 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 341 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 258, 11 |
| Conread position: | 44-566 |
| Cow position: | chr14:44257068-44256541 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 336 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 135, 61 |
| Conread position: | 53-572 |
| Cow position: | chr14:33673332-33673853 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 69-571 |
| Cow position: | chr14:44377740-44378233 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 80-557 |
| Cow position: | chr14:44226343-44226819 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 316 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 96, 28 |
| Conread position: | 84-572 |
| Cow position: | chr14:30596436-30595947 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 319 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 92-545 |
| Cow position: | chr14:13302981-13303432 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 308 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 92-561 |
| Cow position: | chr14:50110527-50110996 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 113-572 |
| Cow position: | chr14:13778932-13779388 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 307 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 114-572 |
| Cow position: | chr14:19328291-19327836 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 114-579 |
| Cow position: | chr14:48970658-48971118 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 117-572 |
| Cow position: | chr14:48825275-48825715 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 306 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 121-465 |
| Cow position: | chr14:38531753-38531410 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 174, 22 |
| Conread position: | 121-558 |
| Cow position: | chr14:30735279-30734849 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 242, 22 |
| Conread position: | 121-572 |
| Cow position: | chr14:9045545-9046007 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr14:12743086-12742635 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr14:17491477-17491027 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 302 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr14:45206296-45206755 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 143, 22 |
| Conread position: | 121-577 |
| Cow position: | chr14:43557957-43558410 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 22 |
| Conread position: | 121-579 |
| Cow position: | chr14:2284318-2284777 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 122-570 |
| Cow position: | chr14:45189784-45189348 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 302 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 127-579 |
| Cow position: | chr14:47641715-47642147 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 188-572 |
| Cow position: | chr14:32446844-32447228 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 123, 129 |
| Conread position: | 196-572 |
| Cow position: | chr14:15276173-15275796 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 70, 54 |
| Conread position: | 196-572 |
| Cow position: | chr14:48704637-48705011 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 163, 59 |
| Conread position: | 218-572 |
| Cow position: | chr14:12610528-12610883 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 6 |
| Conread position: | 244-579 |
| Cow position: | chr14:23901390-23901728 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 235 |
| Conread position: | 248-579 |
| Cow position: | chr14:29705189-29705505 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 299-572 |
| Cow position: | chr14:16343992-16343717 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 299-579 |
| Cow position: | chr14:35917447-35917164 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 179 |
| Conread position: | 300-571 |
| Cow position: | chr14:12899262-12899533 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 300-572 |
| Cow position: | chr14:16919552-16919282 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 321-577 |
| Cow position: | chr14:17760686-17760441 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 323-577 |
| Cow position: | chr14:35385888-35385633 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 155 |
Show alignments to all cow chromosomes.