Cow genome map


           Conread name:
           rpro33_l22.y1
        

               Conread position:
               2-557
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 147
               

               Conread position:
               4-433
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               299
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               12, 110
               

               Conread position:
               9-570
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               18-570
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               360
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               19-572
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               370
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               30-572
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 11
               

               Conread position:
               36-349
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               140, 12
               

               Conread position:
               36-559
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 12
               

               Conread position:
               36-572
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 18
               

               Conread position:
               36-572
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 31
               

               Conread position:
               36-572
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 31
               

               Conread position:
               36-572
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 48
               

               Conread position:
               36-572
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 31
               

               Conread position:
               36-572
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 18
               

               Conread position:
               37-572
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 11
               

               Conread position:
               38-577
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               339
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               9, 32
               

               Conread position:
               38-577
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 108
               

               Conread position:
               45-579
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               51-572
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               344
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               53-572
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               80-572
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 22
               

               Conread position:
               80-572
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               323
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               97, 22
               

               Conread position:
               81-571
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 28
               

               Conread position:
               92-570
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               92-577
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               323
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               268, 16
               

               Conread position:
               112-579
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               311
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               5, 33
               

               Conread position:
               114-572
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 24
               

               Conread position:
               114-572
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               304
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               114-572
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               300
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               114-579
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               117-564
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               194, 26
               

               Conread position:
               117-572
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               117-577
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               120-571
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 23
               

               Conread position:
               121-436
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               121-572
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               121-572
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 22
               

               Conread position:
               121-572
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               304
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               121-572
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 23
               

               Conread position:
               121-572
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               121-572
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               121-577
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               304
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               121-579
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               121-579
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               122-572
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               122-572
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               122-572
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               304
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               123-571
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 23
               

               Conread position:
               123-577
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 16
               

               Conread position:
               124-577
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               300
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               81, 18
               

               Conread position:
               140-571
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               296
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               6, 37
               

               Conread position:
               155-579
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 17
               

               Conread position:
               162-572
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               163-559
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               13, 9
               

               Conread position:
               175-577
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               275
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               136, 141
               

               Conread position:
               175-579
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               166, 136
               

               Conread position:
               189-577
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               262
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               171, 34
               

               Conread position:
               222-577
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               186, 40
               

               Conread position:
               252-571
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               108, 226
               

               Conread position:
               269-571
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               42, 47
               

               Conread position:
               301-579
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               75, 59
               

               Conread position:
               316-577
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 161
               

               Conread position:
               316-579
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 162
               

               Conread position:
               323-572
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               5, 116
               

               Conread position:
               359-572
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               476-577
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 0
               
Show alignments to all cow chromosomes.