Cow genome map
| Conread name: | rpro33_l22.y1 |
| Conread position: | 2-557 |
| Cow position: | chr15:9429804-9430359 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 147 |
| Conread position: | 4-433 |
| Cow position: | chr15:21950247-21949830 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 299 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 12, 110 |
| Conread position: | 9-570 |
| Cow position: | chr15:31784908-31784364 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 27 |
| Conread position: | 18-570 |
| Cow position: | chr15:35735465-35736011 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 360 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 19-572 |
| Cow position: | chr15:7966079-7965513 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 370 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 30-572 |
| Cow position: | chr15:40105772-40106296 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 11 |
| Conread position: | 36-349 |
| Cow position: | chr15:51216498-51216799 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-559 |
| Cow position: | chr15:2076557-2077071 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 12 |
| Conread position: | 36-572 |
| Cow position: | chr15:6156044-6155509 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 36-572 |
| Cow position: | chr15:19738144-19737615 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr15:21665837-21665311 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr15:24295001-24295532 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 48 |
| Conread position: | 36-572 |
| Cow position: | chr15:31358795-31359317 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr15:32494477-32493950 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 18 |
| Conread position: | 37-572 |
| Cow position: | chr15:315949-315421 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 11 |
| Conread position: | 38-577 |
| Cow position: | chr15:498664-499183 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 339 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 38-577 |
| Cow position: | chr15:10888516-10889056 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 45-579 |
| Cow position: | chr15:1882597-1882065 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 51-572 |
| Cow position: | chr15:19817891-19818400 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 344 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 53-572 |
| Cow position: | chr15:28490230-28489714 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 339 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 60, 44 |
| Conread position: | 80-572 |
| Cow position: | chr15:1772441-1772932 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 22 |
| Conread position: | 80-572 |
| Cow position: | chr15:50123999-50123508 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 323 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 97, 22 |
| Conread position: | 81-571 |
| Cow position: | chr15:4922100-4922583 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 92-570 |
| Cow position: | chr15:7837205-7837681 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 92-577 |
| Cow position: | chr15:1237649-1238119 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 323 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 268, 16 |
| Conread position: | 112-579 |
| Cow position: | chr15:4196432-4196903 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 311 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 5, 33 |
| Conread position: | 114-572 |
| Cow position: | chr15:524881-524423 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 114-572 |
| Cow position: | chr15:4812582-4813034 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 114-572 |
| Cow position: | chr15:18268013-18267553 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 300 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 114-579 |
| Cow position: | chr15:1834488-1834029 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 117-564 |
| Cow position: | chr15:6078740-6079178 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 194, 26 |
| Conread position: | 117-572 |
| Cow position: | chr15:37392473-37392929 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 117-577 |
| Cow position: | chr15:369178-368733 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 120-571 |
| Cow position: | chr15:7549386-7549832 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 23 |
| Conread position: | 121-436 |
| Cow position: | chr15:51714944-51715264 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr15:444588-445039 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr15:1519169-1518719 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 22 |
| Conread position: | 121-572 |
| Cow position: | chr15:3888858-3889313 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 304 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr15:7544868-7545311 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 121-572 |
| Cow position: | chr15:18576701-18577149 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr15:50147059-50147501 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 121-577 |
| Cow position: | chr15:5980343-5980787 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 304 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-579 |
| Cow position: | chr15:56467-56925 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 121-579 |
| Cow position: | chr15:36970905-36971358 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 122-572 |
| Cow position: | chr15:7934314-7934764 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 122-572 |
| Cow position: | chr15:18332840-18332392 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 122-572 |
| Cow position: | chr15:44069908-44070362 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 123-571 |
| Cow position: | chr15:14582362-14581925 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 23 |
| Conread position: | 123-577 |
| Cow position: | chr15:35647678-35647228 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 16 |
| Conread position: | 124-577 |
| Cow position: | chr15:32720753-32720302 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 300 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 81, 18 |
| Conread position: | 140-571 |
| Cow position: | chr15:7984022-7983589 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 296 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 155-579 |
| Cow position: | chr15:789558-789131 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 17 |
| Conread position: | 162-572 |
| Cow position: | chr15:6553793-6553387 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 163-559 |
| Cow position: | chr15:32711124-32711514 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 175-577 |
| Cow position: | chr15:38980704-38981109 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 275 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 136, 141 |
| Conread position: | 175-579 |
| Cow position: | chr15:32693613-32694009 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 166, 136 |
| Conread position: | 189-577 |
| Cow position: | chr15:8057347-8057736 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 171, 34 |
| Conread position: | 222-577 |
| Cow position: | chr15:24717177-24717527 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 186, 40 |
| Conread position: | 252-571 |
| Cow position: | chr15:1782334-1782656 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 226 |
| Conread position: | 269-571 |
| Cow position: | chr15:31862425-31862129 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 301-579 |
| Cow position: | chr15:2012213-2012490 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 59 |
| Conread position: | 316-577 |
| Cow position: | chr15:17218084-17217820 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 161 |
| Conread position: | 316-579 |
| Cow position: | chr15:11597832-11597566 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 162 |
| Conread position: | 323-572 |
| Cow position: | chr15:8811837-8811590 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 116 |
| Conread position: | 359-572 |
| Cow position: | chr15:579664-579875 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 476-577 |
| Cow position: | chr15:21450002-21450102 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.